Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
chx48505923 chr1:49591 G/GA G:  
chx48506040 chr1:98233-98234 CT/C CT:  
chx48506041 chr1:98235-98238 AGGC/A AGGC:  
chx48506042 chr1:98242-98248 AAGACTG/A AAGACTG:  
chx48506043 chr1:98251-98252 GT/G GT:  
chx48506044 chr1:98261-98272 ATTCGCTTCTCC/A ATTCGCTTCTCC:  
chx48506064 chr1:108864-108870 TGTGCGC/T TGTGCGC:  
chx48506278 chr1:194424 A/ACAGAAGACT A:  
chx48506280 chr1:194434-194439 ACCAGC/A ACCAGC:  
chx48506281 chr1:194443-194445 AGG/A AGG: