Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
efe1 chr1:638 A/C C:0.5000  
efe2 chr1:860 C/G G:0.4762  
efe3 chr1:864 G/T T:0.4286  
efe4 chr1:896 T/G T:0.0500  
efe5 chr1:907 T/C C:0.0238  
efe6 chr1:942 T/C T:0.3947  
efe7 chr1:1129 C/G C:0.0526  
efe8 chr1:2329 C/A C:0.0312  
efe9 chr1:2853 A/T T:0.2778  
efe10 chr1:2942 A/G A:0.0750