Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
bta1 1:87 T/C C:0.0054  
bta2 1:192 G/A A:0.0430  
bta3 1:238 C/T T:0.3652 rs42801762
bta4 1:300 A/G G:0.4457 rs42801761
bta5 1:324 A/G G:0.1915 rs459642982
bta6 1:340 G/A A:0.3871 rs381103691
bta7 1:355 T/A T:0.3656 rs717523000
bta8 1:357 T/A A:0.4194 rs876481834
bta9 1:359 T/A A:0.0053  
bta10 1:380 G/T T:0.3830 rs207527431