Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
chi1 chr1:97 A/G G:0.0422  
chi2 chr1:189 C/T T:0.0314 rs659778337
chi3 chr1:201 T/C C:0.0863  
chi4 chr1:213 C/T T:0.0022  
chi5 chr1:263 T/C C:0.0335  
chi6 chr1:270 C/T T:0.0022  
chi7 chr1:294 G/A A:0.0088  
chi8 chr1:317 T/C C:0.0395  
chi9 chr1:352 T/C C:0.0496  
chi10 chr1:387 G/A A:0.0022