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Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA　 rRNA　 miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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Items  1  - 10 of 38047892       Items per page  First Prev of 3804790 Next Last
All VarID
 Position
 Alleles
 MAF
 Consequence Type|Effect
 Gene
 dbSNP
fca1 A1:258 C/T T:0.0056 intergenic_variant|MODIFIER;  
fca2 A1:308 A/C A:0.0455 intergenic_variant|MODIFIER;  
fca3 A1:358 T/A T:0.0460 intergenic_variant|MODIFIER;  
fca4 A1:359 T/G G:0.0114 intergenic_variant|MODIFIER;  
fca5 A1:373 A/G G:0.0112 intergenic_variant|MODIFIER;  
fca6 A1:392 A/T T:0.0112 intergenic_variant|MODIFIER;  
fca7 A1:403 T/A T:0.0523 intergenic_variant|MODIFIER;  
fca8 A1:404 T/A T:0.1379 intergenic_variant|MODIFIER;  
fca9 A1:482 T/G T:0.0000 intergenic_variant|MODIFIER;  
fca10 A1:581 C/G G:0.1359 intergenic_variant|MODIFIER;