Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
pvu13876211 chr1:123 C/CTT CTT:0.0303  
pvu13876212 chr1:161 C/CT CT:0.0303  
pvu13876213 chr1:162 A/AT AT:0.0303  
pvu13876214 chr1:559-562 A/A A:0.0303  
pvu13876215 chr1:725 T/T,T TA:0.4531  
pvu13876216 chr1:747-752 T/T TAA:0.3929  
pvu13876217 chr1:845-846 T/T T:0.0303  
pvu13876218 chr1:914 C/CA CA:0.0312  
pvu13876219 chr1:2151-2161 A/A A:0.0312  
pvu13876220 chr1:2163 A/AGA AGA:0.0312