Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
eca25756213 chr1:971-979 C/C C:0.0246  
eca25756214 chr1:980-988 G/G G:0.0246  
eca25756215 chr1:1058 C/CGA CGA:0.0081  
eca25756216 chr1:1060 A/ATC ATC:0.0081  
eca25756217 chr1:1237 T/TTT T:0.2895  
eca25756218 chr1:1495 A/AAG A:0.3276  
eca25756219 chr1:1599-1608 C/C C:0.0081  
eca25756220 chr1:2123 G/GT GT:0.0545  
eca25756221 chr1:2486 T/TAT TAT:0.0085  
eca25756222 chr1:2804-2808 C/C C:0.0083