Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Setting Properties

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Items  1  - 10 of 36174851       Items per page  First Prev of 3617486 Next Last
All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
gga165 chr1:21135 C/T C:0.0000 intron_variant|MODIFIER ENSGALG00000038274  
gga18954 chr1:422405 G/A G:0.0000 rs13812548
gga19478 chr1:451298 C/G C:0.0000  
gga19479 chr1:451301 C/T C:0.0000  
gga19715 chr1:463380 G/C G:0.0000 synonymous_variant|LOW ENSGALG00000043476 (ARF5)  
upstream_gene_variant|MODIFIER ENSGALG00000033149 (GCC1)
gga19716 chr1:463386 G/C G:0.0000 synonymous_variant|LOW ENSGALG00000043476 (ARF5)  
upstream_gene_variant|MODIFIER ENSGALG00000033149 (GCC1)
gga19718 chr1:463409 G/T G:0.0000 missense_variant|MODERATE ENSGALG00000043476 (ARF5)  
upstream_gene_variant|MODIFIER ENSGALG00000033149 (GCC1)
gga19719 chr1:463413 C/G C:0.0000 synonymous_variant|LOW ENSGALG00000043476 (ARF5)  
upstream_gene_variant|MODIFIER ENSGALG00000033149 (GCC1)
gga19720 chr1:463428 G/C G:0.0000 missense_variant|MODERATE ENSGALG00000043476 (ARF5)  
upstream_gene_variant|MODIFIER ENSGALG00000033149 (GCC1)
gga19721 chr1:463430 T/C T:0.0000 missense_variant|MODERATE ENSGALG00000043476 (ARF5)  
upstream_gene_variant|MODIFIER ENSGALG00000033149 (GCC1)