Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
cfa4 1:858 A/C C:0.0700  
cfa2 1:846 T/A A:0.0600  
cfa3 1:853 T/C C:0.0500  
cfa10 1:1524 G/A A:0.0100  
cfa9 1:1369 A/T T:0.0500  
cfa1 1:840 C/T T:0.0500  
cfa8 1:1257 T/G G:0.0100  
cfa5 1:1123 C/T T:0.0300  
cfa6 1:1152 C/G G:0.0200  
cfa7 1:1250 T/A A:0.0100 rs851643272