Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

limit the maximum number of items
Items  1  - 10 of 1501581       Items per page  First Prev of 150159 Next Last
All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
zma1 1:1825 G/A A:0.0100 downstream_gene_variant|MODIFIER GRMZM2G059865 rs833071734
zma2 1:2052 G/T T:0.0200 downstream_gene_variant|MODIFIER GRMZM2G059865  
zma3 1:2111 C/T T:0.0200 downstream_gene_variant|MODIFIER GRMZM2G059865 rs128355621
zma4 1:2179 T/C C:0.0300 downstream_gene_variant|MODIFIER GRMZM2G059865 rs849324852
zma5 1:2352 A/G G:0.0400 downstream_gene_variant|MODIFIER GRMZM2G059865 rs812446127
zma6 1:2789 G/T T:0.0000 downstream_gene_variant|MODIFIER GRMZM2G059865  
zma7 1:2892 G/A A:0.0100 downstream_gene_variant|MODIFIER GRMZM2G059865 rs831840303
zma8 1:3065 G/T T:0.0100 downstream_gene_variant|MODIFIER GRMZM2G059865 rs840184382
zma9 1:3279 C/T T:0.0200 downstream_gene_variant|MODIFIER GRMZM2G059865 rs831921487
zma10 1:3433 T/C C:0.0000 downstream_gene_variant|MODIFIER GRMZM2G059865