Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

limit the maximum number of items
Items  1  - 10 of 144788       Items per page  First Prev of 14479 Next Last
All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
tura1 Tu1:51686 G/A A: synonymous_variant|LOW TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura2 Tu1:51762 C/A A: missense_variant|MODERATE TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura3 Tu1:51848 C/G G: synonymous_variant|LOW TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura4 Tu1:53109 A/C C: missense_variant|MODERATE TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000004.01
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura5 Tu1:53110 G/T G: stop_gained|HIGH TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000004.01
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura6 Tu1:53371 T/C C: stop_lost|HIGH TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000004.01
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura7 Tu1:54158 G/T G: 3_prime_UTR_variant|MODIFIER TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000004.01
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura8 Tu1:54172 T/C T: 3_prime_UTR_variant|MODIFIER TuG1812G0100000001.01  
upstream_gene_variant|MODIFIER TuG1812G0100000004.01
upstream_gene_variant|MODIFIER TuG1812G0100000003.01
upstream_gene_variant|MODIFIER TuG1812G0100000002.01
tura9 Tu1:145568 C/T C: synonymous_variant|LOW TuG1812G0100000007.01  
downstream_gene_variant|MODIFIER TuG1812G0100000008.01
tura10 Tu1:145784 G/A A: missense_variant|MODERATE TuG1812G0100000007.01  
downstream_gene_variant|MODIFIER TuG1812G0100000008.01