Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
tae1 TGACv1_scaffold_173195_2DL:563 G/C   BA00577750
tae2 TGACv1_scaffold_173195_2DL:619 C/T   BA00338094
tae3 TGACv1_scaffold_174655_2DL:146 T/C   BA00910371
tae4 TGACv1_scaffold_174655_2DL:194 G/C   BA00791254
tae5 TGACv1_scaffold_174655_2DL:227 G/C   BA00671001
tae6 TGACv1_scaffold_174655_2DL:255 G/C   BA00257401
tae7 TGACv1_scaffold_174655_2DL:285 C/T   BA00840584
tae8 TGACv1_scaffold_174655_2DL:318 G/C   BA00483930
tae9 TGACv1_scaffold_174655_2DL:367 T/C   BA00794360
tae10 TGACv1_scaffold_177136_2DS:82286 C/T   missense_variant|MODERATE TRIAE_CS42_2DS_TGACv1_177136_AA0566130 BA00813672