Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
efe16919423 chr1:1237 T/TTT T:0.1471  
efe16919424 chr1:1319-1320 T/T T:0.0294  
efe16919425 chr1:1495 A/AAG A:0.0588  
efe16919426 chr1:2906-2907 C/C C:0.0294  
efe16919427 chr1:3226-3227 C/C CT:0.1429  
efe16919428 chr1:3912-3913 T/T T:0.0588  
efe16919429 chr1:3916-3917 C/C C:0.0263  
efe16919430 chr1:4824 A/AT AT:0.0294  
efe16919431 chr1:5395 C/CA C:0.4062  
efe16919432 chr1:6108-6112 T/T T:0.1562