Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
oar60025623 chr1:117-118 CA/C CA:0.3790  
oar60025624 chr1:241-244 AGAT/A A:0.0040  
oar60025625 chr1:261 G/GAT,GCT GCT:0.3223  
oar60025626 chr1:278 A/AC A:0.2863  
oar60025627 chr1:296 G/GC,GT GT:0.1169  
oar60025628 chr1:464 T/TG T:0.0000  
oar60025629 chr1:529 G/GT GT:0.0363  
oar60025630 chr1:554-555 AG/A AG:0.0000  
oar60025631 chr1:611 A/AG A:0.0000  
oar60025632 chr1:635 A/ATG ATG:0.3034