Materials for Canis Familiaries

GVMSampleID SampleName Organism Cultivar Geographic Material Coverage ProjectAcc SampleAcc PubmedID Instrument AssayType CenterName LibraryLayout Platform Label Sex
cfa.s1 DQ1 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 15.72x SRP035294 SRS540593 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ25 female
cfa.s10 DQ9 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 14.12x SRP035294 SRS540602 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ59 female
cfa.s11 GS1 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 14.77x SRP035294 SRS534399 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD301 female
cfa.s12 GS10 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 15.07x SRP035294 SRS538159 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD304 female
cfa.s13 GS2 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 15.50x SRP035294 SRS536446 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD302 female
cfa.s14 GS3 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 15.14x SRP035294 SRS536570 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD303 female
cfa.s15 GS4 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 15.07x SRP035294 SRS539231 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD310 male
cfa.s16 GS5 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 14.51x SRP035294 SRS538173 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD305 female
cfa.s17 GS6 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 15.33x SRP035294 SRS538424 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD306 male
cfa.s18 GS7 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 15.93x SRP035294 SRS538440 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD307 male
cfa.s19 GS8 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 14.65x SRP035294 SRS538663 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD308 male
cfa.s2 DQ10 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 15.48x SRP035294 SRS540603 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ60 male
cfa.s20 GS9 Canis lupus familiaris German Shepherd Eastern Asia,China,Kunming Blood 16.02x SRP035294 SRS538664 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DKD309 male
cfa.s21 KM1 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 11.39x SRP035294 SRS539232 24721644 Illumina HiSeq 1500 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD106 female
cfa.s22 KM10 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 16.31x SRP035294 SRS540532 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD223 male
cfa.s23 KM2 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 16.32x SRP035294 SRS539424 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD107 female
cfa.s24 KM3 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 15.51x SRP035294 SRS539482 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD110 female
cfa.s25 KM4 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 15.93x SRP035294 SRS540006 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD113 female
cfa.s26 KM5 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 15.77x SRP035294 SRS540015 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD117 female
cfa.s27 KM6 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 15.33x SRP035294 SRS540528 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD207 male
cfa.s28 KM7 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 17.15x SRP035294 SRS540529 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD208 male
cfa.s29 KM8 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 13.62x SRP035294 SRS540530 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD215 male
cfa.s3 DQ2 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 16.31x SRP035294 SRS540594 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ28 female
cfa.s30 KM9 Canis lupus familiaris Kunming dog Eastern Asia,China,Kunming Blood 13.89x SRP035294 SRS540531 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA KD222 male
cfa.s31 LJ1 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 15.77x SRP035294 SRS540563 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA LJ1 male
cfa.s32 LJ10 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 14.88x SRP035294 SRS540588 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA LJ8 female
cfa.s33 LJ2 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 15.74x SRP035294 SRS540568 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA LJ12 male
cfa.s34 LJ3 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 15.11x SRP035294 SRS540591 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YL5 male
cfa.s35 LJ4 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 13.50x SRP035294 SRS540586 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA LJ2 female
cfa.s36 LJ5 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 14.40x SRP035294 SRS540587 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA LJ6 female
cfa.s37 LJ6 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 14.51x SRP035294 SRS540592 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YL7 male
cfa.s38 LJ7 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 12.73x SRP035294 SRS540589 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA WM3 female
cfa.s39 LJ8 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 15.03x SRP035294 SRS540575 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA LJ13 female
cfa.s4 DQ3 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 14.29x SRP035294 SRS540597 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ29 male
cfa.s40 LJ9 Canis lupus familiaris Lijiang indigenous dog Eastern Asia,China,Lijiang Blood 15.12x SRP035294 SRS540590 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YL1 male
cfa.s41 TM1 Canis lupus familiaris Tibetan Mastiff NA NA 15.18x SRP035294 SRS528242 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA01 NA
cfa.s42 TM10 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 15.73x SRP035294 SRS540671 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA81 female
cfa.s43 TM2 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 13.91x SRP035294 SRS540660 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA55 male
cfa.s44 TM3 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 14.09x SRP035294 SRS540625 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA19 male
cfa.s45 TM4 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 13.16x SRP035294 SRS540620 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA18 male
cfa.s46 TM5 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 14.43x SRP035294 SRS540614 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA12 female
cfa.s47 TM6 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 14.65x SRP035294 SRS540631 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA23 male
cfa.s48 TM7 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 15.69x SRP035294 SRS540651 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA33 female
cfa.s49 TM8 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 14.10x SRP035294 SRS540609 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA06 female
cfa.s5 DQ4 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 14.90x SRP035294 SRS540596 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ32 male
cfa.s50 TM9 Canis lupus familiaris Tibetan Mastiff Eastern Asia,China,Diqing Blood 15.74x SRP035294 SRS540665 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQZA80 female
cfa.s51 YJ1 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 15.87x SRP035294 SRS540533 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ01 male
cfa.s52 YJ10 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 15.31x SRP035294 SRS540546 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ26 female
cfa.s53 YJ2 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 14.18x SRP035294 SRS540534 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ03 male
cfa.s54 YJ3 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 13.88x SRP035294 SRS540535 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ08 female
cfa.s55 YJ4 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 14.09x SRP035294 SRS540536 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ10 male
cfa.s56 YJ5 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 13.59x SRP035294 SRS540537 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ14 female
cfa.s57 YJ6 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 14.66x SRP035294 SRS540545 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ21 female
cfa.s58 YJ7 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 14.33x SRP035294 SRS540543 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ16 male
cfa.s59 YJ8 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 14.78x SRP035294 SRS540538 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ15 female
cfa.s6 DQ5 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 15.61x SRP035294 SRS540598 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ33 female
cfa.s60 YJ9 Canis lupus familiaris Yingjiang indigenous dog Eastern Asia,China,Yingjiang Blood 14.67x SRP035294 SRS540544 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA YJ17 male
cfa.s61 Basenji Canis lupus familiaris Basenji Northern America,United States of America,Maryland,Bethesda NA 6.42x NA NA 24453982 NA NA NA PAIRED ILLUMINA RKW 13764 male
cfa.s62 Dingo Canis lupus familiaris Dingo Oceania,Australia,Bargo Dingo Sanctuary NA 6.80x NA NA 24453982 NA NA NA PAIRED ILLUMINA RKW13760 male
cfa.s63 ISW Canis lupus familiaris grep_wolf Western Asia,Israel,Golan Heights,Neve Ativ NA 6.96x NA NA 24453982 NA NA NA PAIRED ILLUMINA RKW13759 female
cfa.s64 GLJ Canis lupus familiaris Golden Jackal Western Asia,Israel,Tel Aviv NA 5.53x NA NA 24453982 NA NA NA PAIRED ILLUMINA RKW 1332 female
cfa.s7 DQ6 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 13.06x SRP035294 SRS540599 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ45 female
cfa.s8 DQ7 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 16.04x SRP035294 SRS540600 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ52 male
cfa.s9 DQ8 Canis lupus familiaris Diqing indigenous dog Eastern Asia,China,Diqing Blood 12.52x SRP035294 SRS540601 24721644 Illumina HiSeq 2000 WGS SHANGHAI INSTITUTES FOR BIOLOGICAL SCIENCES PAIRED ILLUMINA DQ54 male