Materials for Equus caballus

GVMSampleID SampleName Organism Cultivar Geographic Material Coverage ProjectAcc SampleAcc PubmedID Instrument AssayType CenterName LibraryLayout Platform HorseType Sex Age SequencedLocation
ecb.s1 Batagai Equus caballus NA Eastern Europe,Russian,Verkhoyansk,Batagai Bone 110.43x ERP012152 ERS849397 26598656 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS SINGLE, PAIRED ILLUMINA NA Male 4,450 ± 35 uncalibrated yBP NA
ecb.s10 CG_6 Equus caballus NA NA Blood 8.70x SRP077490 SRS1529023 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Male NA NA
ecb.s11 CG_7 Equus caballus NA NA Blood 23.05x SRP077490 SRS1529024 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Male Mixed NA
ecb.s12 CG_7-tag12_CTTGTA Equus caballus NA NA Blood 36.58x SRP077490 SRS1561903 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Male Mixed NA
ecb.s13 Emgl1 Equus caballus NA NA Tooth 4.55x ERP011292 ERS805750 26412128 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS SINGLE, PAIRED ILLUMINA Mongolian Female 102 years Northern Europe,Denmark,Copenhagen
ecb.s14 Emgl3 Equus caballus NA NA Tooth 1.50x ERP011292 ERS805751 26412128 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS SINGLE, PAIRED ILLUMINA Mongolian Female 103 years Northern Europe,Denmark,Copenhagen
ecb.s15 FM0450 Equus caballus NA NA Blood 33.39x ERP011292 ERS806048 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s16 FM0467 Equus caballus NA NA Blood 32.63x ERP011292 ERS806044 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s17 FM1030 Equus caballus NA NA Blood 36.31x ERP011292 ERS806047 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s18 FM1041 Equus caballus NA NA Blood 17.19x ERP011292 ERS806042 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s19 FM1190 Equus caballus NA NA Blood 35.03x ERP011292 ERS806041 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s2 CGG10022 Equus caballus NA Northern Asia,Russian,Siberian,Taymyr Peninsula Bone 46.53x ERP008451 ERS568891 25512547 Illumina HiSeq 2000, Illumina Genome Analyzer Iix WGS CENTRE FOR GEOGENETICS SINGLE, PAIRED ILLUMINA
ecb.s20 FM1785 Equus caballus NA NA Blood 31.91x ERP011292 ERS806046 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s21 FM1798 Equus caballus NA NA Blood 48.69x ERP011292 ERS806037 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s22 FM1932 Equus caballus NA NA Blood 23.41x ERP011292 ERS806038 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s23 FM1948 Equus caballus NA NA Blood 18.81x ERP011292 ERS806039 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s24 FM1951 Equus caballus NA NA Blood 40.99x ERP011292 ERS806043 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s25 FM2218 Equus caballus NA NA Blood 26.25x ERP011292 ERS806040 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s26 FM_431 Equus caballus NA NA Blood 25.60x ERP011292 ERS806045 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Franches-Montagnes Male Modern Western Europe,Switzerland,Bern
ecb.s27 KB7754 Equus caballus NA NA Immortalized cells 53.76x ERP011292 ERS805731 26412128 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Mongolian Male Modern Northern Europe,Denmark,Copenhagen
ecb.s28 M1005 Equus caballus NA NA Blood 5.89x SRP067684 SRS1218759 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s29 M1009 Equus caballus NA NA Blood 7.46x SRP067684 SRS1218763 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s3 CGG10023 Equus caballus NA Northern Asia,Russian,Siberian,Taymyr Peninsula Bone 404.39x ERP008451 ERS568892 25512547 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS SINGLE, PAIRED ILLUMINA
ecb.s30 M1012 Equus caballus NA NA Blood 7.34x SRP067684 SRS1218764 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s31 M1048 Equus caballus NA NA Blood 7.42x SRP067684 SRS1218766 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s32 M5256 Equus caballus NA NA Hair 10.94x SRP067684 SRS1220771 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s33 M5259 Equus caballus NA NA Hair 5.71x SRP067684 SRS1220772 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Female Adult NA
ecb.s34 M5260 Equus caballus NA NA Hair 4.77x SRP067684 SRS1220773 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Female Adult NA
ecb.s35 M5271 Equus caballus NA NA Hair 5.23x SRP067684 SRS1220775 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Female Adult NA
ecb.s36 M5287 Equus caballus NA NA Hair 4.42x SRP067684 SRS1220776 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Female Adult NA
ecb.s37 M5304 Equus caballus NA NA Hair 4.98x SRP067684 SRS1220778 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s38 M5306 Equus caballus NA NA Hair 8.97x SRP067684 SRS1220779 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Female Adult NA
ecb.s39 M992 Equus caballus NA NA Blood 4.80x SRP067684 SRS1218591 26753841 Illumina HiSeq 2000 WGS UNIVERSITY OF ILLINOIS PAIRED ILLUMINA Standardbred Male Adult NA
ecb.s4 CGG101397 Equus caballus NA Eastern Europe,Russian,Verkhoyansk,Tumeski Bone 126.96x ERP012152 ERS849396 26598656 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Male 19th century AD NA
ecb.s40 Mor_EMS595_MOR1 Equus caballus NA NA Blood 30.94x ERP011292 ERS806987 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Morgan Female Modern Northern America,United States of America,Minnesota
ecb.s41 Qrt_A1543_QH1 Equus caballus NA NA Blood 29.49x ERP011292 ERS806983 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Quarter Female Modern Northern America,United States of America,Minnesota
ecb.s42 Qrt_A2085_QH4 Equus caballus NA NA Blood 27.85x ERP011292 ERS806986 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Quarter Male Modern Northern America,United States of America,Minnesota
ecb.s43 Qrt_A5659_QH5 Equus caballus NA NA Blood 30.52x ERP011292 ERS806984 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Quarter Female Modern Northern America,United States of America,Minnesota
ecb.s44 Qrt_A5964_QH6 Equus caballus NA NA Blood 31.88x ERP011292 ERS806985 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Quarter Female Modern Northern America,United States of America,Minnesota
ecb.s45 SRS173307 Equus caballus NA Northern America,Canada,Yukon NA 282.45x SRP023200 SRS173307 23803765 Illumina Genome Analyzer Iix, Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF SINGLE, PAIRED ILLUMINA NA NA NA NA
ecb.s46 SRS431663 Equus caballus NA NA NA 39.91x SRP023200 SRS431663 23803765 Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF PAIRED ILLUMINA Arabian Female NA NA
ecb.s47 SRS438157 Equus caballus NA NA NA 33.72x SRP023200 SRS438157 23803765 Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF PAIRED ILLUMINA Norwegian Fjord Female NA NA
ecb.s48 SRS438330 Equus caballus NA NA NA 43.66x SRP023200 SRS438330 23803765 Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF PAIRED ILLUMINA Standardbred Male NA NA
ecb.s49 SRS438345 Equus caballus NA Eastern Europe,Russian,Taymyr,Krasnoyarsk NA 3.34x SRP023200 SRS438345 23803765 Illumina Genome Analyzer Iix, Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF SINGLE ILLUMINA NA NA NA NA
ecb.s5 CG_1 Equus caballus NA NA Blood 9.25x SRP077490 SRS1529020 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Female NA NA
ecb.s50 SRS439179 Equus caballus NA NA NA 60.58x SRP023200 SRS439179 23803765 Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF PAIRED ILLUMINA Icelandic Male NA NA
ecb.s51 SRS445121 Equus caballus NA NA NA 29.15x SRP023200 SRS445121 23803765 Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF PAIRED ILLUMINA Thoroughbred Female NA NA
ecb.s52 SRS529191 Equus caballus NA Eastern Europe,Russian,Taymyr,Krasnoyarsk NA 5.69x SRP023200 SRS529191 23803765 Illumina HiSeq 2000 WGS CENTER FOR GEOGENETICS, NATURAL HISTORY MUSEUM OF SINGLE ILLUMINA NA NA 24,306 ± 135 (BP) NA
ecb.s53 Std_M1009_STDB9 Equus caballus NA NA Blood 16.70x ERP011292 ERS806982 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Standardbred Male Modern Northern America,United States of America,Minnesota
ecb.s54 Std_M5256_STDB12 Equus caballus NA NA Blood 26.04x ERP011292 ERS806981 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Standardbred Male Modern Northern America,United States of America,Minnesota
ecb.s55 Std_M977_STDB3 Equus caballus NA NA Blood 27.47x ERP011292 ERS806980 26412128 Illumina HiSeq 2000 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA Standardbred Female Modern Northern America,United States of America,Minnesota
ecb.s56 TG1111D2628 Equus caballus NA NA Blood 25.48x SRP035222 SRS690462 NA Illumina HiSeq 2000 WGS THERAGEN BIO INSTITUTE PAIRED ILLUMINA NA Male 8 more NA
ecb.s57 TG1111D2629 Equus caballus NA NA Blood 38.33x SRP035222 SRS690463 NA Illumina HiSeq 2000 WGS THERAGEN BIO INSTITUTE PAIRED ILLUMINA NA Female 8 more NA
ecb.s58 Yak1 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Kustur Hair 31.77x ERP012152 ERS849386 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Male NA NA
ecb.s59 Yak2 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Kustur Hair 52.87x ERP012152 ERS849387 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Female NA NA
ecb.s6 CG_2 Equus caballus NA NA Blood 8.51x SRP077490 SRS1529026 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Female NA NA
ecb.s60 Yak3 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Kustur Hair 31.67x ERP012152 ERS849388 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Female NA NA
ecb.s61 Yak4 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Kustur Hair 27.03x ERP012152 ERS849389 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Male NA NA
ecb.s62 Yak5 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Kustur Hair 31.81x ERP012152 ERS849390 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Female NA NA
ecb.s63 Yak6 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Batagay-Alyta Hair 34.77x ERP012152 ERS849391 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Female NA NA
ecb.s64 Yak7 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Batagay-Alyta Hair 64.79x ERP012152 ERS849392 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Female NA NA
ecb.s65 Yak8 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Batagay-Alyta Hair 27.01x ERP012152 ERS849393 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Male NA NA
ecb.s66 Yak9 Equus caballus NA Eastern Europe,Russian,Sakha Republic,Batagay-Alyta Hair 27.76x ERP012152 ERS849394 26598656 Illumina HiSeq 2000, Illumina HiSeq 2500 WGS CENTRE FOR GEOGENETICS PAIRED ILLUMINA NA Male NA NA
ecb.s7 CG_3 Equus caballus NA NA Blood 9.66x SRP077490 SRS1529027 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Female NA NA
ecb.s8 CG_4 Equus caballus NA NA Blood 8.14x SRP077490 SRS1529021 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Male NA NA
ecb.s9 CG_5 Equus caballus NA NA Blood 9.15x SRP077490 SRS1529022 27207956 Illumina HiSeq 2000 WGS Uppsala University PAIRED ILLUMINA Shetland Pony Female NA NA