Materials for Daucus carota

GVMSampleID SampleName Organism Cultivar Geographic Material Coverage ProjectAcc SampleAcc PubmedID Instrument AssayType LibraryLayout Platform Phenotype Specimen_voucher Sub_species Dev_stage Biomaterial_provider Collected_by
dcr.s1 Ames26381 Daucus carota subsp. gummifer NA Southern Europe,Portugal,Faro Leaf 35.52x SRP062070 SRS1024087 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root Ames 26381 gummifer vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s10 B6274B_927-1 Daucus carota subsp. sativus B6274B Northern America,United States of America,Wisconsin Leaf 15.19x SRP062070 SRS1024061 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root B6274B 927-1 sativus vegetative US Department of Agriculture, ARS, Vegetable Crops Research Unit Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s11 B7262B_349-1 Daucus carota subsp. sativus B7262B Northern America,United States of America,Wisconsin Leaf 17.78x SRP062070 SRS1024058 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Purple root B7262B 349-1 sativus vegetative US Department of Agriculture, ARS, Vegetable Crops Research Unit Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s12 Brasilia_Embrapa Daucus carota subsp. sativus Brasilia South America,Brazil,Rio Grande do Sul,Rio Grande Leaf 21.01x SRP062070 SRS1024071 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root Brasilia Embrapa LOTE 39/06 sativus vegetative Embrapa Embrapa, Brasilia, Brazil
dcr.s13 DH1 Daucus carota subsp. sativus DH1 Western Europe,Netherlands Leaf 53.7x SRP062113 SRS1024596 27158781 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange cultivated carrot NA NA vegetative Rijk Zwaan http://rijkzwaan.com NA
dcr.s14 PT187235 Daucus carota subsp. sativus Nantes No. 1 Western Europe,Belgium Leaf 20.05x SRP062070 SRS1024068 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root PI 187235 sativus vegetative National Plant Germplasm System, Ames Iowa Station de Recherches de l''Etat, Gembloux, Namur, Belgium
dcr.s15 PT200876 Daucus carota subsp. sativus Land race Southern Asia,Afghanistan Leaf 13.71x SRP062070 SRS1024075 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Purple root PI 200876 sativus vegetative National Plant Germplasm System, Ames Iowa Afghan Department of Agriculture, Kabul, Afghanistan
dcr.s16 PT211590 Daucus carota subsp. sativus Land race Southern Asia,Afghanistan,Badakhshan Leaf 16.69x SRP062070 SRS1024074 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Yellow root PI 211590 sativus vegetative National Plant Germplasm System, Ames Iowa Gentry, H., Crops Research Division - USDA-ARS, Plant Introduction Section, Plant Industry Station, Beltsville, Maryland, USA
dcr.s17 PT261648 Daucus carota subsp. sativus Kokubu Western Europe,Netherlands Leaf 18.55x SRP062070 SRS1024062 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root PI 261648 sativus vegetative National Plant Germplasm System, Ames Iowa Davis, E., Crops Research Division - USDA-ARS, Beltsville, Maryland, USA
dcr.s18 PT264232 Daucus carota subsp. sativus Chantenay Red Cored Western Europe,France Leaf 14.45x SRP062070 SRS1024065 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root PI 264232 sativus vegetative National Plant Germplasm System, Ames Iowa L. Clause, Bretigny-Sur-Orge, Essonne, France
dcr.s19 PT274297 Daucus carota subsp. carota NA Southern Asia,Pakistan,Nomal Leaf 49.93x SRP062070 SRS1024080 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 274297 carota vegetative National Plant Germplasm System, Ames Iowa Harlan, J., USDA-ARS, USA
dcr.s2 Ames26383 Daucus carota subsp. gummifer NA Southern Europe,Portugal,Faro Leaf 24.06x SRP062070 SRS1024086 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root Ames 26383 gummifer vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s20 PT279764 Daucus carota subsp. capillifolius NA Northern Africa,Libya,Jefren Leaf 39.36x SRP062070 SRS1024082 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 279764 capillifolius vegetative National Plant Germplasm System, Ames Iowa NA
dcr.s21 PT319403 Daucus aureus NA Western Asia,Israel Leaf 30.53x SRP062070 SRS1024089 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 319403 NA vegetative National Plant Germplasm System, Ames Iowa National & University Institute of Agriculture, Rehobot, Israel
dcr.s22 PT451755 Daucus carota subsp. sativus Lange gele stomper Western Europe,Netherlands Leaf 13.19x SRP062070 SRS1024066 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Yellow root PI 451755 sativus vegetative National Plant Germplasm System, Ames Iowa Zeven, A., Agricultural University, Institute of Plant Breeding, Wageningen, Netherlands
dcr.s23 PT478369 Daucus carota subsp. carota NA Eastern Asia,China,Xinjiang Leaf 20.02x SRP062070 SRS1024081 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA White root PI 478369 carota vegetative National Plant Germplasm System, Ames Iowa Orton, T., Department of Vegetable Crops, University of California, Davis, California
dcr.s24 PT478861 Daucus carota subsp. carota NA Western Europe,France,Paris Leaf 12.94x SRP062070 SRS1024077 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA White root PI 478861 carota vegetative National Plant Germplasm System, Ames Iowa Museum National d''Histoire Naturelle, Paris, Ville-de-Paris, France
dcr.s25 PT478883 Daucus carota subsp. gummifer NA Western Europe,France,Finistere,Le Conquet Leaf 47.65x SRP062070 SRS1024083 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 478883 gummifer vegetative National Plant Germplasm System, Ames Iowa Inst. Nat. de la Recherche Agronomique, Rouen, Seine-Maritime, France
dcr.s26 PT502244 Daucus carota subsp. carota NA Southern Europe,Portugal,Coimbra Leaf 38.83x SRP062070 SRS1024084 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 502244 carota vegetative National Plant Germplasm System, Ames Iowa de Alexadrino, M., Universidade de Coimbra, Coimbra, Portugal
dcr.s27 PT540422 Daucus carota subsp. sativus Land race Central Asia,Uzbekistan,Tashkent Leaf 15.80x SRP062070 SRS1024073 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Yellow root PI 540422 sativus vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA et al.
dcr.s28 PT632391 Daucus carota subsp. sativus Long Imperator 58 Northern America,United States of America,California Leaf 19.87x SRP062070 SRS1024064 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root PI 632391 sativus vegetative National Plant Germplasm System, Ames Iowa Ferry-Morse Seed Company, Inc., Mountain View, California
dcr.s29 PT643114 Daucus carota subsp. sativus White Belgian Northern America,United States of America,California Leaf 19.20x SRP062070 SRS1024067 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA White root PI 643114 sativus vegetative National Plant Germplasm System, Ames Iowa Pieter-Wheeler Seed Company, California, USA
dcr.s3 Ames26408 Daucus carota subsp. carota NA Southern Europe,Portugal,Beja Leaf 31.36x SRP062070 SRS1024091 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root Ames 26408 carota vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s30 PT652136 Daucus carota subsp. sativus Shin Kuroda Gosun Eastern Asia,Japan,Ibaraki Leaf 13.13x SRP062070 SRS1024069 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root PI 652136 sativus vegetative National Plant Germplasm System, Ames Iowa Watanabe, S., National Inst. of Agrobiological Res., Germplasm Storage Center, Tsukuba, Ibaraki, Japan
dcr.s31 PT652188 Daucus carota subsp. sativus Ping Ding Eastern Asia,China,Beijing Leaf 14.04x SRP062070 SRS1024070 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Purple root PI 652188 sativus vegetative National Plant Germplasm System, Ames Iowa Jingyi, W., Institute of Vegetable and Floriculture, Chinese Academy of Agricultural Sciences, Beijing, China
dcr.s32 PT652233 Daucus guttatus NA Southern Asia,Iran,Mazandaran Leaf 28.39x SRP062070 SRS1024092 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 652233 NA vegetative National Plant Germplasm System, Ames Iowa Botanical Garden of Iran, Tehran, Iran
dcr.s33 PT652336 Daucus carota subsp. sativus Land race Western Asia,Syria,Damascus Leaf 15.94x SRP062070 SRS1024072 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Purple root PI 652336 sativus vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA et al.
dcr.s34 PT652358 Daucus carota subsp. carota NA Western Asia,Turkey,Izmir Leaf 19.26x SRP062070 SRS1024079 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA White root PI 652358 carota vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA et al.
dcr.s35 PT652374 Daucus carota subsp. sativus Land race Western Asia,Turkey,Mugla Leaf 15.29x SRP062070 SRS1024076 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Yellow root PI 652374 sativus vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA et al.
dcr.s36 PT652393 Daucus carota subsp. carota NA Western Asia,Turkey,Konya Leaf 41.29x SRP062070 SRS1024085 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root PI 652393 carota vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s4 Ames27395 Daucus carota subsp. carota NA Central Asia,Uzbekistan,Gazelkent Leaf 17.95x SRP062070 SRS1024078 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA White root Ames 27395 carota vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA et al.
dcr.s5 Ames29096 Daucus sahariensis NA Northern Africa,Tunisia Leaf 34.37x SRP062070 SRS1024088 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root Ames 29096 NA vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s6 Ames29108 Daucus syrticus NA Northern Africa,Tunisia Leaf 31.49x SRP062070 SRS1024090 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root Ames 29108 NA vegetative National Plant Germplasm System, Ames Iowa Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s7 Ames31194 Daucus carota subsp. gummifer NA Western Europe,France Leaf 26.76x SRP062070 SRS1024093 28149306 Illumina HiSeq 2500 WGS PAIRED ILLUMINA White root Ames 31194 gummifer vegetative National Plant Germplasm System, Ames Iowa Parc Zoologique et Botanique de la Ville de Mulhouse, Mulhouse, France
dcr.s8 B2566B_921-1 Daucus carota subsp. sativus B2566B Northern America,United States of America,Wisconsin Leaf 15.08x SRP062070 SRS1024059 28149306 Illumina HiSeq 2000 WGS PAIRED ILLUMINA Orange root B2566B 921-1 sativus vegetative US Department of Agriculture, ARS, Vegetable Crops Research Unit Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA
dcr.s9 B493B_920-1 Daucus carota subsp. sativus B493B Northern America,United States of America,Wisconsin Leaf 8.86x SRP062070 SRS1024060 28149306 Illumina HiSeq 2000 WGS SINGLE ILLUMINA Orange root B493B 920-1 sativus vegetative US Department of Agriculture, ARS, Vegetable Crops Research Unit Simon, P., USDA, ARS, Vegetable Crops Research Unit, Madison, Wisconsin, USA