Name Samples Material Technology Platform Data Type Coverage Description Author Journal Year PMID
ERP008451 2 Bone WGS Illumina HiSeq 2000, Illumina Genome Analyzer Iix SINGLE, PAIRED ~225x Prehistoric genomes reveal the genetic foundation and cost of horse domestication Mikkel Schubert et. al. PNAS 2014 25512547
ERP011292 23 Blood, Tooth, Immortalized cells WGS Illumina HiSeq 2000, Illumina HiSeq 2500 SINGLE, PAIRED ~28x Evolutionary Genomics and Conservation of the Endangered Przewalski’s Horse Ludovic Orlando et al. Current Biology 2016 26412128
ERP012152 11 Bone, Hair WGS Illumina HiSeq 2000, Illumina HiSeq 2500 SINGLE, PAIRED ~52x Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments Pablo Librado et al. PNAS 2015 26598656
SRP023200 8 NA WGS Illumina Genome Analyzer Iix, Illumina HiSeq 2000 SINGLE, PAIRED ~62x Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse Ludovic Orlando et al. Nature 2013 23803765
SRP035222 2 Blood WGS Illumina HiSeq 2000 PAIRED ~32x Horse Whole genome shotgun sequencing Project Theragen Bio Institute NA 2014 NA
SRP067684 12 Blood/Hair WGS Illumina HiSeq 2000 PAIRED ~6.5x Identification and validation of risk loci for osteochondrosis in standardbreds Annette M. McCoy et. al. BMC Genomics 2016 26753841
SRP077490 8 Blood WGS Illumina HiSeq 2000 PAIRED ~14x Large Deletions at the SHOX Locus in the Pseudoautosomal Region Are Associated with Skeletal Atavism in Shetland Ponies Nima Rafati et. al.  G3 (Bethesda) 2016 27207956