Name Samples Material Technology Platform Data Type Coverage Description Author Journal Year PMID
ERP004877 7 NA WGS Illumina HiSeq 2000 pair-end ~14x Bos taurus from Iran: NextGen project low coverage sequencing Genoscope NA 2014 NA
ERP014211 2 NA WGS Illumina HiSeq 2000 pair-end ~23.8x Rapid Discovery of De Novo Deleterious Mutations in Cattle Using Genome Sequence Data: Enhancing the Value of Farm Animals as Model Species INRA JOUY-EN-JOSAS NA 2016 NA
SRP062822 3 NA WGS Illumina Genome Analyzer II pair-end 14.1x Whole-genome sequencing of the endangered bovine species gayal (Bos frontalis) provides new insights into its genetic features Beijing Genome Institute NA 2016 NA
SRP096151 1 blood WGS Illumina HiSeq 2000 pair-end ~13x One individual from the low-altitude cattle population resequencing Sichuan Agricultural University NA 2016 NA
SRP071632 48 whole blood WGS Illumina HiSeq 2000 PAIRED ~11x Whole genome scan reveals the genetic signature of African Ankole cattle breed and potential for higher quality beef Mengistie Taye et al. BMC Genetics 2017 28183280
SRP074807 3 whole blood WGS Illumina HiSeq 2000 PAIRED 14.7x The genome landscape of indigenous African cattle Jaemin Kim et al. Genome Biology 2017 28219390
SRP074809 10 whole blood WGS Illumina HiSeq 2000 PAIRED 17.4x Cattle genome-wide analysis reveals genetic signatures in trypanotolerant N’Dama Soo-Jin Kim et al. BMC Genomics 2017 28499406
SRP027370 10 blood WGS Illumina HiSeq 2000 PAIRED 16.6x Deciphering the Genetic Blueprint behind Holstein Milk Proteins and Production Hyun-Jeong Lee et al. Genome Biol Evol. 2014 24920005
SRP026602 11 blood WGS Illumina HiSeq 2000 PAIRED 16x Deleted copy number variation of Hanwoo and Holstein using next generation sequencing at the population level Dong-Hyun Shin et al. BMC Genomics 2014 24673797