| Accession | CRX017966 |
| Organism | Homo sapiens |
| Title | human sperm Hi-C R1 |
| BioProject | PRJCA000241 |
| BioSample | SAMC013103 |
| Platform | Illumina HiSeq X Ten |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
| human sperm Hi-C R1 |
subsequent analysis. We generated raw contact matrix at the binning resolution of 40 Kb, 100 Kb, and 250 Kb. The ICE (Dixon et al., 2012) normalization is applied to remove the bias in the raw matrix using the ICE implement in HiTC with parameters (--sparse. filter 0.02) (Servant et al., 2012). |
OTHER |
GENOMIC |
unspecified |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| Release date | 2017-07-13 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR019673 |
CRD039110
CRD039111
CRD039112
CRD039113
CRD039114
CRD039115
|
4,589.37
5,238.48
13,437.6
15,702.24
15,182.33
17,653.38
|
|
| Submitter | Xuepeng Chen (chenxp@big.ac.cn) |
|---|
| Organization | Beijing Institute of Genomics, Chinese Academy of Sciences |
|---|
| Date submitted | 2017-05-26 |
|---|
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