BIR Edit

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Basic information
Short name BIR
Full name JMC Primates Brain Imaging Repository
Description This repository is a collection of high-resoluted MRI data of non-human primates brain speciemens stored in Japan Monkey Centre.
URL http://www.j-monkey.jp/BIR/index_e.html
Year founded
Last update & version
Availability Free to academic users only
Contact information
University/Institution hosted Japan Monkey Centre
Address
City
Province/State
Country/Region Japan
Contact name Tomoko Sakai
Contact email sakai.tomoko.5w@gmail.com
Data information
Data object
  • Animal
Data type
  • DNA
Database category
  • Standard ontology and nomenclature
Major organism
  • Aotus trivirgatus
Keyword
  • brain
Publications
  • The Japan Monkey Centre Primates Brain Imaging Repository for comparative neuroscience: an archive of digital records including records for endangered species. [PMID: 30357587]
    Tomoko Sakai, Junichi Hata, Hiroki Ohta, Yuta Shintaku, Naoto Kimura, Yuki Ogawa, Kazumi Sogabe, Susumu Mori, Hirotaka James Okano, Yuzuru Hamada, Shinsuke Shibata, Hideyuki Okano, Kenichi Oishi

    Advances in magnetic resonance imaging (MRI) and computational analysis technology have enabled comparisons among various primate brains in a three-dimensional electronic format. Results from comparative studies provide information about common features across primates and species-specific features of neuroanatomy. Investigation of various species of non-human primates is important for understanding such features, but the majority of comparative MRI studies have been based on experimental primates, such as common marmoset, macaques, and chimpanzee. A major obstacle has been the lack of a database that includes non-experimental primates' brain MRIs. To facilitate scientific discoveries in the field of comparative neuroanatomy and brain evolution, we launched a collaborative project to develop an open-resource repository of non-human primate brain images obtained using ex vivo MRI. As an initial open resource, here we release a collection of structural MRI and diffusion tensor images obtained from 12 species: pygmy marmoset, owl monkey, white-fronted capuchin, crab-eating macaque, Japanese macaque, bonnet macaque, toque macaque, Sykes' monkey, red-tailed monkey, Schmidt's guenon, de Brazza's guenon, and lar gibbon. Sixteen postmortem brain samples from the 12 species, stored in the Japan Monkey Centre (JMC), were scanned using a 9.4-T MRI scanner and made available through the JMC collaborative research program ( http://www.j-monkey.jp/BIR/index_e.html ). The expected significant contributions of the JMC Primates Brain Imaging Repository include (1) resources for comparative neuroscience research, (2) preservation of various primate brains, including those of endangered species, in a permanent digital form, (3) resources with higher resolution for identifying neuroanatomical features, compared to previous MRI atlases, (4) resources for optimizing methods of scanning large fixed brains, and (5) references for veterinary neuroradiology. User-initiated research projects beyond these contributions are also anticipated.

    Primates 2018:59(6)

    0 Citations (from Europe PMC, 2019-01-19)

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  • Created on: 2019-01-04
    • ***d@***c.cn [2019-01-07]
    • ***d@***c.cn [2019-01-04]

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