YARG Edit

Citations: 0

z-index: 0

Basic information
Short name YARG
Full name A repository for arsenic-related genes in yeast.
Description YARG is a database consisting of 3396 arsenic-related genes which are obtained from 13 phenotypic screening and 7 transcriptional profiling datasets.
URL http://cosbi4.ee.ncku.edu.tw/YARG
Year founded 2017
Last update & version 2018-06-06
Accessibility Accessible
Contact information

The contact information is provided to facilitate update of database information, and it is curated based on the contact details in the database or the related publications. To ensure effective contact with database constructors, we give priority to the contact details in the database.

University/Institution National Cheng Kung University
Address
City
Province/State Taiwan
Country/Region China
Contact name (PI/Team) Wei-Sheng Wu
Contact email (PI/Helpdesk) National Cheng Kung University
Data information
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Publications
  • YARG: A repository for arsenic-related genes in yeast. [PMID: 30048518]
    Jagat Rathod, Hao-Ping Tu, Yung-I Chang, Yu-Han Chu, Yan-Yuan Tseng, Jiin-Shuh Jean, Wei-Sheng Wu

    Arsenic is a toxic metalloid. Moderate levels of arsenic exposure from drinking water can cause various human health problems such as skin lesions, circulatory disorders and cancers. Thus, arsenic toxicity is a key focus area for environmental and toxicological investigations. Many arsenic-related genes in yeast have been identified by experimental strategies such as phenotypic screening and transcriptional profiling. These identified arsenic-related genes are valuable information for studying arsenic toxicity. However, the literature about these identified arsenic-related genes is widely dispersed and cannot be easily acquired by researchers. This prompts us to develop YARG (Yeast Arsenic-Related Genes) database, which comprehensively collects 3396 arsenic-related genes in the literature. For each arsenic-related gene, the number and types of experimental evidence (phenotypic screening and/or transcriptional profiling) are provided. Users can use both search and browse modes to query arsenic-related genes in YARG. We used two case studies to show that YARG can return biologically meaningful arsenic-related information for the query gene(s). We believe that YARG is a useful resource for arsenic toxicity research. YARG is available at http://cosbi4.ee.ncku.edu.tw/YARG/.

    PLoS One 2018:13(7)

    0 Citations (from Europe PMC, 2019-06-08)

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Record metadata

  • Created on: 2019-01-04
    • ***d@***c.cn [2019-01-07]
    • ***d@***c.cn [2019-01-07]
    • ***d@***c.cn [2019-01-04]

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