PED Edit

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Basic information
Short name PED
Full name Plant editosome database
Description a curated database of RNA editosome in plants that is dedicated to the curation, integration and standardization of plant editosome data.
URL http://bigd.big.ac.cn/ped
Year founded 2018
Last update & version 2018-09-20 v1.0
Availability Free to academic users only
Contact information
University/Institution hosted Beijing Institute of Genomics, Chinese Academy of Sciences
Address No.1 Beichen West Road, Chaoyang District, Beijing 100101, China
City Beijing
Province/State
Country/Region China
Contact name Zhang Zhang
Contact email zhangzhang@big.ac.cn
Data information
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Data type
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Publications
  • Plant editosome database: a curated database of RNA editosome in plants. [PMID: 30364952]
    Man Li, Lin Xia, Yuansheng Zhang, Guangyi Niu, Mengwei Li, Pei Wang, Yang Zhang, Jian Sang, Dong Zou, Songnian Hu, Lili Hao, Zhang Zhang

    RNA editing plays an important role in plant development and growth, enlisting a number of editing factors in the editing process and accordingly revealing the diversity of plant editosomes for RNA editing. However, there is no resource available thus far that integrates editosome data for a variety of plants. Here, we present Plant Editosome Database (PED; http://bigd.big.ac.cn/ped), a curated database of RNA editosome in plants that is dedicated to the curation, integration and standardization of plant editosome data. Unlike extant relevant databases, PED incorporates high-quality editosome data manually curated from related publications and organelle genome annotations. In the current version, PED integrates a complete collection of 98 RNA editing factors and 20 836 RNA editing events, covering 203 organelle genes and 1621 associated species. In addition, it contains functional effects of editing factors in regulating plant phenotypes and includes detailed experimental evidence. Together, PED serves as an important resource to help researchers investigate the RNA editing process across a wide range of plants and thus would be of broad utility for the global plant research community.

    Nucleic Acids Res. 2018:()

    0 Citations (from Europe PMC, 2019-03-22)

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Record metadata

  • Created on: 2019-01-04
    • ***ina@***c.cn [2019-03-08]
    • ***d@***c.cn [2019-01-08]
    • ***d@***c.cn [2019-01-08]
    • ***d@***c.cn [2019-01-04]

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