Database Commons

a catalog of biological databases

e.g., animal; RNA; Methylation; China

Database information

iProX (Integrated Proteome Resources)

General information

Description: an integrated proteome resources center in China, which is built to accelerate the worldwide data sharing in proteomics.
Year founded: 2018
Last update:
Version:
Accessibility:
Manual:
Accessible
Real time : Checking...
Country/Region: China
Data type:
Data object:
NA
Database category:
Major organism:
NA
Keywords:

Contact information

University/Institution: National Center for Protein Sciences
Address: No.38, Life Science Park Road, Changping District, Beijing, 102206, China
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Yunping Zhu
Contact email (PI/Helpdesk): iprox@iprox.org

Record metadata

Created on: 2019-01-04
Curated by:
Dong Zou [2019-01-11]
Dong Zou [2019-01-04]

Ranking

All databases:
494/4516 (89.083%)
Raw bio-data:
31/450 (93.333%)
Metadata:
37/434 (91.705%)
494
Total Rank
14
Citations
14
z-index

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Publications

30252093
iProX: an integrated proteome resource. [PMID: 30252093]
Jie Ma, Tao Chen, Songfeng Wu, Chunyuan Yang, Mingze Bai, Kunxian Shu, Kenli Li, Guoqing Zhang, Zhong Jin, Fuchu He, Henning Hermjakob, Yunping Zhu

Sharing of research data in public repositories has become best practice in academia. With the accumulation of massive data, network bandwidth and storage requirements are rapidly increasing. The ProteomeXchange (PX) consortium implements a mode of centralized metadata and distributed raw data management, which promotes effective data sharing. To facilitate open access of proteome data worldwide, we have developed the integrated proteome resource iProX (http://www.iprox.org) as a public platform for collecting and sharing raw data, analysis results and metadata obtained from proteomics experiments. The iProX repository employs a web-based proteome data submission process and open sharing of mass spectrometry-based proteomics datasets. Also, it deploys extensive controlled vocabularies and ontologies to annotate proteomics datasets. Users can use a GUI to provide and access data through a fast Aspera-based transfer tool. iProX is a full member of the PX consortium; all released datasets are freely accessible to the public. iProX is based on a high availability architecture and has been deployed as part of the proteomics infrastructure of China, ensuring long-term and stable resource support. iProX will facilitate worldwide data analysis and sharing of proteomics experiments.

Nucleic Acids Res. 2019:47(D1) | 16 Citations (from Europe PMC, 2020-01-18)