iProX Edit

Citations: 3

z-index: 3

Basic information
Short name iProX
Full name Integrated Proteome Resources
Description an integrated proteome resources center in China, which is built to accelerate the worldwide data sharing in proteomics.
URL http://www.iprox.org
Year founded 2018
Last update & version
Accessibility Accessible
Contact information

The contact information is provided to facilitate update of database information, and it is curated based on the contact details in the database or the related publications. To ensure effective contact with database constructors, we give priority to the contact details in the database.

University/Institution National Center for Protein Sciences
Address No.38, Life Science Park Road, Changping District, Beijing, 102206, China
City Beijing
Province/State Beijing
Country/Region China
Contact name (PI/Team) Yunping Zhu
Contact email (PI/Helpdesk) iprox@iprox.org
Data information
Data object
Data type
Database category
Major organism
Keyword
Publications
  • iProX: an integrated proteome resource. [PMID: 30252093]
    Jie Ma, Tao Chen, Songfeng Wu, Chunyuan Yang, Mingze Bai, Kunxian Shu, Kenli Li, Guoqing Zhang, Zhong Jin, Fuchu He, Henning Hermjakob, Yunping Zhu

    Sharing of research data in public repositories has become best practice in academia. With the accumulation of massive data, network bandwidth and storage requirements are rapidly increasing. The ProteomeXchange (PX) consortium implements a mode of centralized metadata and distributed raw data management, which promotes effective data sharing. To facilitate open access of proteome data worldwide, we have developed the integrated proteome resource iProX (http://www.iprox.org) as a public platform for collecting and sharing raw data, analysis results and metadata obtained from proteomics experiments. The iProX repository employs a web-based proteome data submission process and open sharing of mass spectrometry-based proteomics datasets. Also, it deploys extensive controlled vocabularies and ontologies to annotate proteomics datasets. Users can use a GUI to provide and access data through a fast Aspera-based transfer tool. iProX is a full member of the PX consortium; all released datasets are freely accessible to the public. iProX is based on a high availability architecture and has been deployed as part of the proteomics infrastructure of China, ensuring long-term and stable resource support. iProX will facilitate worldwide data analysis and sharing of proteomics experiments.

    Nucleic Acids Res 2019:47(D1)

    3 Citations (from Europe PMC, 2019-06-08)

Rank

  • Ranking in all databases: No. 1852
  • Ranking in category/categories:
    • Raw bio-data: No. 153
    • Metadata: No. 149
The box plots depict Z-index distribution for all databases in Database Commons and for specific database category/categories. The red line indicates log2(Z-index) of iProX.

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Record metadata

  • Created on: 2019-01-04
    • ***d@***c.cn [2019-01-11]
    • ***d@***c.cn [2019-01-11]
    • ***d@***c.cn [2019-01-04]

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