Rice Variation Database Edit

Citations: 0

z-index: 0

Basic information
Short name Rice Variation Database
Full name
Description Here we provide detailed annotation information of variations, including SNP consequence, gene function, etc.. It was also hyper-linked to other databases (e.g. dbSNP). We curated the SNP effects by integrating available genotype-to-phenotype association results. Also, we developed three practical online tools, RiceClustwl, Population Genetic Analysis and Gene Haplotype Analysis, for users to do advanced data mining and analysis.
URL http://variation.ic4r.org
Year founded 2014
Last update & version
Availability Free to academic users only
Contact information

The contact information is provided to facilitate update of database information, and it is curated based on the contact details in the database or the related publications. To ensure effective contact with database constructors, we give priority to the contact details in the database.

University/Institution Beijing Institute of Genomics, Chinese Academy of Sciences
City Beijing
Country/Region China
Contact name (PI/Team) Zhangzhang
Contact email (PI/Helpdesk) zhangzhang@big.ac.cn
Data information
Data object
Data type
Database category
Major organism


  • Ranking in all databases: No. 0
  • Ranking in category/categories:
    • Genotype phenotype and variation: No. 0
The box plots depict Z-index distribution for all databases in Database Commons and for specific database category/categories. The red line indicates log2(Z-index) of Rice Variation Database.

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Record metadata

  • Created on: 2018-05-25
    • ***ina@***c.cn [2018-05-25]

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