Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://ecoliwiki.net
Full name: EcoliWiki
Description: EcoliWiki is the community annotation component of the PortEco project,an online data resource that integrates information on laboratory strains of Escherichia coli,its phages,plasmids and mobile genetic elements.
Year founded: 2012
Last update: 11/24/2014
Version: v1.0
Accessibility:
Manual:
Accessible
Real time : Checking...
Country/Region: United States

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Texas A&M University
Address: Department of Biochemistry and Biophysics,Texas Agrilife Research,College Station,TX 77843,USA
City: College Station
Province/State: TX
Country/Region: United States
Contact name (PI/Team): James C. Hu
Contact email (PI/Helpdesk): jimhu@tamu.edu

Publications

22064863
EcoliWiki: a wiki-based community resource for Escherichia coli. [PMID: 22064863]
McIntosh BK, Renfro DP, Knapp GS, Lairikyengbam CR, Liles NM, Niu L, Supak AM, Venkatraman A, Zweifel AE, Siegele DA, Hu JC.

EcoliWiki is the community annotation component of the PortEco (http://porteco.org; formerly EcoliHub) project, an online data resource that integrates information on laboratory strains of Escherichia coli, its phages, plasmids and mobile genetic elements. As one of the early adopters of the wiki approach to model organism databases, EcoliWiki was designed to not only facilitate community-driven sharing of biological knowledge about E. coli as a model organism, but also to be interoperable with other data resources. EcoliWiki content currently covers genes from five laboratory E. coli strains, 21 bacteriophage genomes, F plasmid and eight transposons. EcoliWiki integrates the Mediawiki wiki platform with other open-source software tools and in-house software development to extend how wikis can be used for model organism databases. EcoliWiki can be accessed online at http://ecoliwiki.net.

Nucleic Acids Res. 2012:40(Database issue) | 22 Citations (from Europe PMC, 2024-04-06)

Ranking

All databases:
3312/6000 (44.817%)
Gene genome and annotation:
987/1675 (41.134%)
3312
Total Rank
22
Citations
1.833
z-index

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Record metadata

Created on: 2015-06-20
Curated by:
Lin Liu [2022-08-23]
Lina Ma [2018-06-14]
Jian Sang [2016-04-04]
Jian Sang [2015-12-08]
Jian Sang [2015-06-27]