ChickenSD / RefSNPs / ggaS30236091
Detail information of ggaS30236091
1.General Information
Reference SNP ID: | ggaS30236091 |
Chromosome: | chr23 |
Position: | 107 |
RefSNP Alleles | G/A |
NCBI ss link |
2.Gene information
Var ID | Gene ID | Transcript ID | Gene Symbol | Variant Effect | Biotype | cDNA Position | Allele Change | Protein ID | Protein Position | Residue Change |
---|---|---|---|---|---|---|---|---|---|---|
ggaS30236091 | - | - | intergenic_variant | - | 0 | - => - | - | 0 | - => - |
3.Individual Genotype
Individual | Genotype |
---|---|
100S | R |
101S_L1_I028 | R |
102S_L3_I037 | R |
103S | R |
104S_L7_I029 | R |
105S_L3_I039 | R |
106S_L6_I030 | R |
107S_L2_I031 | R |
108S_L6_I032 | R |
109S_L5_I033 | G |
10S_L1_I052 | A |
110S_L4_I034 | R |
111S_L3_I047 | R |
112S_L3_I035 | R |
113S_L1_I036 | R |
114S_L3_I037 | A |
116S_L6_I038 | R |
117S_L2_I039 | R |
118S_L4_I040 | G |
119S_L3_I041 | G |
11S | R |
120S_L1_I041 | R |
121S_L3_I042 | G |
122S_L4_I043 | G |
123S_L4_I044 | R |
124S_L2_I048 | R |
125S_L3_I050 | R |
126S_L3_I051 | R |
127S_L2_I045 | R |
128S_L1_I042 | R |
129S_L3_I043 | G |
12S_L4_I011 | G |
130S_L4_I044 | R |
131S_L2_I045 | R |
132S_L2_I046 | R |
133S_L8_I046 | R |
134S_L2_I047 | R |
135S_L3_I048 | R |
13S_L7_I012 | R |
14S_L2_I021 | R |
15S_L6_I022 | R |
16S_L5_I023 | R |
17S_L3_I024 | G |
18833 | R |
18S_L7_I025 | R |
19297 | G |
19912 | G |
19S_L4_I026 | R |
1S | R |
20736 | R |
20S_L7_I027 | R |
21S_L6_I028 | R |
22S_L6_I029 | R |
23S_L2_I030 | R |
24S_L4_I031 | R |
25S_L3_I032 | G |
26S | R |
28S_L4_I035 | R |
2S | R |
30S_L2_I037 | R |
31S_L3_I038 | R |
32S_L1_I039 | R |
33S | R |
35S_L5_I041 | G |
36S_L5_I042 | R |
37S_L2_I043 | R |
38S_L6_I044 | R |
39S_L6_I053 | R |
3S_L4_I003 | A |
40S_L2_I054 | R |
41S_L5_I045 | G |
42S_L3_I055 | R |
43S | R |
44S_L4_I001 | R |
45S_L2_I002 | R |
46S_L4_I003 | G |
47S_L3_I046 | R |
48S_L1_I004 | R |
49S_L1_I005 | R |
4S_L4_I004 | R |
50S_L1_I047 | R |
51S_L6_I048 | R |
52S_L2_I050 | R |
53S_L2_I006 | R |
54S_L2_I007 | G |
55S_L1_I008 | R |
56S_L1_I010 | R |
57S_L3_I046 | R |
58S_L4_I051 | R |
59S_L5_I052 | G |
5S | R |
60S_L5_I053 | A |
61S_L8_I054 | G |
62S_L8_I055 | R |
63S_L5_I056 | R |
64S_L4_I001 | R |
65S_L5_I002 | R |
66S_L2_I003 | R |
67S_L1_I011 | R |
68S_L3_I012 | R |
69S | R |
6S | G |
70S | R |
71S_L3_I023 | R |
72S_L1_I024 | R |
73S_L1_I025 | A |
74S_L4_I026 | G |
75S_L3_I027 | R |
76S_L1_I028 | R |
77S_L4_I029 | R |
78S_L4_I030 | R |
79S_L2_I031 | R |
7S_L4_I007 | A |
80S_L3_I004 | R |
81S_L1_I005 | R |
82S | R |
83S_L3_I033 | R |
85S_L5_I007 | R |
86S_L5_I008 | R |
87S_L5_I010 | R |
88S_L4_I011 | R |
89S_L6_I012 | R |
90S_L4_I021 | R |
91S_L4_I022 | R |
92S_L5_I023 | R |
93S_L7_I024 | R |
95S_L8_I025 | R |
96S_L4_I026 | R |
97S_L8_I027 | R |
98S_L3_I034 | R |
99S_L2_I035 | R |
9S | R |
A1 | R |
A10 | R |
A12 | G |
A14 | R |
A3 | R |
A8 | G |
BKL2 | G |
BLB2_L2_I008 | A |
BLO1 | A |
BLO11 | A |
BLO15 | A |
BLO2 | A |
BLO3_L4_I022 | A |
BOJA2 | A |
BYW3_L3_I033 | A |
GVF | A |
India1 | R |
India11 | R |
India13 | R |
India15 | A |
India17 | R |
India19 | R |
India21 | G |
India23 | R |
India25 | R |
India27 | A |
India29 | R |
India33 | R |
India35 | G |
India37 | R |
India39 | R |
India41 | R |
India43 | R |
India45 | R |
India47 | G |
India5 | R |
India51 | G |
India55 | R |
India57 | R |
India59 | R |
India61 | R |
India7 | R |
India9 | R |
L2 | R |
N1 | R |
N11 | R |
N13 | R |
N18 | R |
N3 | R |
N5 | G |
N7 | R |
N8 | R |
S-f1_L4_I106 | R |
S-f2_I107 | G |
S-f3_I108 | G |
S-f4_L4_I109 | G |
S-m1_I101 | R |
S-m2_I102 | G |
S-m3_I103 | G |
S-m4_L2_I104 | R |
S-m5_I105 | R |
S6 | G |
SAMN02486156 | R |
SAMN02486157 | R |
SAMN02486158 | R |
SAMN02486159 | R |
SAMN02486160 | R |
SAMN02486161 | R |
SAMN02486162 | G |
SAMN02486163 | R |
SAMN02486164 | R |
SAMN02486165 | R |
SAMN02486166 | R |
SAMN02486167 | R |
Silkia | R |
T2 | R |
T3 | R |
T5 | A |
TD1 | R |
TD12 | R |
TD15 | R |
TD22 | R |
TD27 | R |
TD30 | R |
TD6 | G |
TD9 | R |
Tibet | R |
Xcelris_101 | R |
Xcelris_104 | R |
Xcelris_105 | R |
Xcelris_10A | R |
Xcelris_10B | R |
Xcelris_112 | R |
Xcelris_113 | R |
Xcelris_114 | G |
Xcelris_11B | G |
Xcelris_12 | A |
Xcelris_120 | G |
Xcelris_127 | G |
Xcelris_128 | G |
Xcelris_129 | R |
Xcelris_12A | R |
Xcelris_13 | G |
Xcelris_137 | A |
Xcelris_13B | G |
Xcelris_14 | A |
Xcelris_141 | A |
Xcelris_143 | A |
Xcelris_144 | R |
Xcelris_14A | G |
Xcelris_14B | R |
Xcelris_174 | R |
Xcelris_175 | R |
Xcelris_176 | R |
Xcelris_1A | R |
Xcelris_1B | G |
Xcelris_219 | R |
Xcelris_221 | R |
Xcelris_222 | R |
Xcelris_224 | R |
Xcelris_226 | R |
Xcelris_227 | R |
Xcelris_278 | A |
Xcelris_279 | G |
Xcelris_280 | G |
Xcelris_2A | R |
Xcelris_2B | R |
Xcelris_3 | G |
Xcelris_331 | R |
Xcelris_332 | R |
Xcelris_333 | R |
Xcelris_335 | R |
Xcelris_336 | R |
Xcelris_339 | R |
Xcelris_340 | G |
Xcelris_341 | R |
Xcelris_377 | R |
Xcelris_378 | R |
Xcelris_379 | R |
Xcelris_380 | R |
Xcelris_381 | R |
Xcelris_382 | R |
Xcelris_383 | R |
Xcelris_384 | G |
Xcelris_385 | R |
Xcelris_394 | G |
Xcelris_44 | A |
Xcelris_4A | G |
Xcelris_4B | G |
Xcelris_5A | R |
Xcelris_5B | R |
Xcelris_67 | R |
Xcelris_6A | G |
Xcelris_6B | G |
Xcelris_7 | R |
Xcelris_77 | R |
Xcelris_8 | G |
Xcelris_84 | R |
Xcelris_8B | R |
Xcelris_90 | R |
Xcelris_97 | G |
Xcelris_98 | A |
Xcelris_MT-134 | A |
Xcelris_MT-18 | A |
Xcelris_MT-48 | A |
Xcelris_MT-6 | A |
Xcelris_MT-85 | R |
Xcelris_MT-9 | G |
Xcelris_MT-99 | A |
Y1-f1_L5_I119 | R |
Y1-f2_L6_I121 | R |
Y1-f3_L7_I101 | R |
Y1-m1_L6_I120 | R |
Y1-m2_L4_I122 | R |
Y1-m3_L7_I123 | R |
Y1-m4_I124 | R |
Y1-m5_L7_I102 | R |
YPt565 | R |
YPt601 | R |
YPt604 | R |
YPt609 | A |
YPt610 | R |
YPt637 | R |
YPt641 | R |
YPt648 | R |
You1 | R |
You3_L7_I1000005 | R |
Ypt566 | G |
Ypt567 | R |
Ypt568 | R |
Ypt569 | R |
Ypt570 | R |
Ypt571 | G |
Ypt572 | G |
Ypt573 | R |
Ypt574 | R |
Ypt575 | R |
Ypt576 | R |
Ypt577 | R |
Ypt578 | R |
Ypt579 | G |
Ypt580 | R |
Ypt581 | R |
Ypt582 | R |
Ypt583 | G |
Ypt584 | G |
Ypt585 | G |
Ypt586 | G |
Ypt587 | G |
Ypt588 | G |
Ypt589 | R |
Ypt590 | R |
Ypt591 | R |
Ypt592 | R |
Ypt593 | R |
Ypt594 | R |
Ypt595 | R |
Ypt596 | R |
Ypt597 | R |
Ypt598 | R |
Ypt599 | G |
Ypt600 | R |
Ypt602 | R |
Ypt603 | R |
Ypt606 | R |
Ypt607 | R |
Ypt608 | R |
Ypt623 | R |
Ypt624 | G |
Ypt626 | R |
Ypt638 | R |
Ypt640 | R |
Ypt642 | G |
Ypt643 | R |
Ypt645 | R |
Ypt646 | R |
Ypt647 | R |
Yt516 | R |
Yt517 | R |
Yt518 | R |
Yt519 | R |
Yt520 | R |
Yt521 | R |
Yt522 | R |
Yt523 | R |
Yt524 | R |
Yt525 | R |
Yt526 | R |
Yt527 | R |
Yt528 | R |
Yt529 | R |
Yt530 | R |
Yt531 | R |
Yt536 | R |
Yt538 | R |
Yt539 | R |
Yt540 | R |
ZJ1 | R |
ZJ2 | G |
ZJ3 | G |
ZJ4 | R |
india3 | R |
india49 | G |
production | R |
yp914ypt | G |
ypt169_L3_I011 | G |
ypt170_L2_I012 | G |
ypt171_L2_I021 | G |
ypt173_L2_I022 | R |
ypt175_L2_I023 | R |
ypt2041_L6_I002 | G |
ypt2043_L1_I037 | G |
ypt2051_L3_I003 | G |
ypt2053_L6_I004 | R |
ypt2063_L6_I005 | R |
ypt2069_L6_I006 | R |
ypt2071_L1_I038 | G |
ypt2082 | R |
ypt2086 | R |
ypt2087 | R |
ypt2091 | A |
ypt2092 | A |
ypt2093 | A |
ypt2094 | G |
ypt2095 | R |
ypt2098 | G |
ypt2100 | R |
ypt2101 | R |
ypt2102 | G |
ypt2103 | R |
ypt2105 | R |
ypt2106 | R |
ypt2107 | R |
ypt2108 | G |
ypt2109 | G |
ypt2110 | R |
ypt2111 | G |
ypt2112 | A |
ypt2114 | A |
ypt2115 | R |
ypt2116 | R |
ypt2117 | R |
ypt2119 | G |
ypt2120 | A |
ypt2121 | A |
ypt2122 | R |
ypt2124_L4_I052 | R |
ypt2126_L3_I053 | G |
ypt2127_L1_I036 | R |
ypt2128_L6_I054 | A |
ypt2144_L6_I055 | R |
ypt2145_L6_I056 | R |
ypt2146_L6_I001 | R |
ypt2163 | R |
ypt2164 | R |
ypt2165 | G |
ypt2166 | G |
ypt2167 | R |
ypt2168 | R |
ypt2169 | R |
ypt2170 | G |
ypt2171 | R |
ypt2172 | R |
ypt2173 | G |
ypt2174 | A |
ypt2175 | R |
ypt2176 | R |
ypt2177 | R |
ypt2178 | R |
ypt217_L2_I024 | R |
ypt2184 | A |
ypt2185 | A |
ypt2186 | R |
ypt2187 | R |
ypt2189 | R |
ypt2190 | R |
ypt2191 | A |
ypt219_L3_I025 | G |
ypt2200 | A |
ypt2205 | R |
ypt2209 | R |
ypt220_L2_I026 | R |
ypt2214 | R |
ypt2215 | R |
ypt2216 | R |
ypt2217 | A |
ypt2218 | A |
ypt2219 | R |
ypt221_L3_I042 | R |
ypt2220 | R |
ypt2221 | R |
ypt2222 | R |
ypt222_L3_I027 | R |
ypt2437 | R |
ypt2438 | R |
ypt2439 | R |
ypt2440 | R |
ypt2441 | G |
ypt2442 | A |
ypt2443 | R |
ypt2444 | R |
ypt2445 | R |
ypt2446 | R |
ypt2447 | A |
ypt2448 | R |
ypt2449 | R |
ypt2454 | G |
ypt2459 | G |
ypt2468 | R |
ypt2496 | R |
ypt2497 | G |
ypt2498 | G |
ypt2499 | R |
ypt2500 | R |
ypt2503 | R |
ypt2504 | R |
ypt2507 | R |
ypt2512 | R |
ypt2516 | G |
ypt2521 | G |
ypt2523 | R |
ypt2534 | R |
ypt2541 | R |
ypt2543 | R |
ypt2544 | R |
ypt2545 | R |
ypt2546 | R |
ypt2547 | R |
ypt2552 | R |
ypt2562 | R |
ypt2563 | G |
ypt2569 | R |
ypt2570 | R |
ypt2571 | G |
ypt2572 | G |
ypt2573 | R |
ypt2574 | R |
ypt2575 | R |
ypt2579 | R |
ypt258_L3_I028 | R |
ypt2598 | R |
ypt259_L2_I029 | R |
ypt2601 | R |
ypt2606 | G |
ypt2608 | R |
ypt2622 | R |
ypt2624 | R |
ypt2625 | R |
ypt2627 | R |
ypt2628 | R |
ypt2629 | R |
ypt262_L3_I030 | G |
ypt2630 | R |
ypt2636 | R |
ypt2638 | R |
ypt263_L3_I031 | R |
ypt2640 | A |
ypt2641 | R |
ypt2643 | G |
ypt2644 | R |
ypt2646 | R |
ypt264_L3_I032 | R |
ypt2650 | R |
ypt2653 | G |
ypt2656 | R |
ypt2657 | R |
ypt2658 | R |
ypt2661 | R |
ypt2664 | R |
ypt2665 | R |
ypt2669 | R |
ypt2670 | R |
ypt2671 | G |
ypt2672 | R |
ypt2673 | R |
ypt2678 | R |
ypt2706 | R |
ypt2722 | G |
ypt2724 | R |
ypt2729 | A |
ypt2733 | G |
ypt2739 | R |
ypt2740 | R |
ypt2745 | R |
ypt2746 | R |
ypt2760 | R |
ypt2761 | R |
ypt2765 | R |
ypt2766 | R |
ypt2775 | G |
ypt2780 | R |
ypt2781 | R |
ypt2782 | R |
ypt2783 | A |
ypt2784 | G |
ypt2785 | R |
ypt2786 | R |
ypt2787 | R |
ypt2788 | R |
ypt2789 | R |
ypt2790 | A |
ypt2791 | R |
ypt2792 | R |
ypt2799 | R |
ypt2800 | R |
ypt2810 | R |
ypt2812 | R |
ypt2813 | R |
ypt2814 | R |
ypt2815 | R |
ypt2816 | R |
ypt2817 | R |
ypt2819 | R |
ypt2821 | R |
ypt2822 | R |
ypt2823 | R |
ypt2824 | R |
ypt2825 | R |
ypt2826 | R |
ypt2827 | R |
ypt2828 | R |
ypt2831 | R |
ypt2832 | G |
ypt2842 | R |
ypt2843 | R |
ypt2849 | G |
ypt2859 | G |
ypt2861 | A |
ypt2862 | A |
ypt2863 | A |
ypt2870 | A |
ypt2871 | A |
ypt2887 | A |
ypt2888 | A |
ypt2889 | A |
ypt2891_L3_I041 | A |
ypt2892 | R |
ypt2893_L3_I025 | R |
ypt2894 | R |
ypt2895_L3_I026 | A |
ypt2902 | R |
ypt2909 | R |
ypt2910 | G |
ypt2911 | R |
ypt2912 | R |
ypt2918 | A |
ypt2929 | R |
ypt3001 | R |
ypt3002 | G |
ypt3003 | R |
ypt3004 | R |
ypt3005 | R |
ypt3006 | R |
ypt3007 | R |
ypt3008 | G |
ypt3009 | R |
ypt3010 | G |
ypt3011 | R |
ypt3012 | R |
ypt3016 | R |
ypt3017 | R |
ypt3028 | R |
ypt3038 | R |
ypt3040 | R |
ypt3041 | R |
ypt3042 | R |
ypt3043 | R |
ypt3044 | R |
ypt3045 | R |
ypt3046 | G |
ypt3047 | R |
ypt3050 | R |
ypt3051 | R |
ypt3052 | G |
ypt3061 | G |
ypt3069 | G |
ypt3072 | R |
ypt3133 | G |
ypt3134 | G |
ypt3135 | R |
ypt3136 | R |
ypt3137 | G |
ypt3138 | R |
ypt3139 | R |
ypt3140 | R |
ypt3141 | R |
ypt3142 | R |
ypt3143 | R |
ypt3144_L3_I039 | G |
ypt3145 | R |
ypt3146 | R |
ypt3149_L2_I034 | R |
ypt3150_L8_I023 | R |
ypt3159_L6_I035 | R |
ypt3160_L8_I024 | R |
ypt3162_L6_I036 | R |
ypt3179_L8_I025 | R |
ypt3180 | A |
ypt3181_L7_I038 | R |
ypt3182_L1_I039 | R |
ypt3189_L1_I040 | R |
ypt3190_L8_I026 | R |
ypt3191_L2_I041 | R |
ypt3193_L1_I027 | R |
ypt3195_L1_I042 | G |
ypt3196_L2_I043 | R |
ypt3197_L1_I044 | R |
ypt3204_L7_I046 | R |
ypt3205_L2_I047 | R |
ypt3206_L1_I048 | R |
ypt3207_L6_I050 | R |
ypt3210_L6_I051 | R |
ypt3211_L6_I052 | R |
ypt3212_L4_I028 | R |
ypt3213_L8_I029 | G |
ypt3219_L1_I030 | G |
ypt3220_L1_I031 | A |
ypt3221_L1_I032 | G |
ypt3222_L1_I033 | G |
ypt3224_L8_I043 | G |
ypt3225_L2_I053 | R |
ypt3226_L3_I044 | R |
ypt3228-7_L1_I034 | G |
ypt3229_L8_I045 | A |
ypt3238_L3_I046 | G |
ypt3239_L1_I035 | A |
ypt3240_L6_I054 | A |
ypt3243_L8_I047 | A |
ypt3245 | R |
ypt3246_L6_I050 | G |
ypt3247_L6_I051 | R |
ypt3257_L1_I056 | R |
ypt3258_L3_I001 | R |
ypt3259_L6_I002 | R |
ypt3260_L6_I003 | R |
ypt3261_L7_I004 | G |
ypt3262_L7_I005 | R |
ypt3269_L7_I006 | R |
ypt3270_L1_I007 | R |
ypt3271_L7_I008 | R |
ypt3272_L7_I010 | R |
ypt3274A_L7_I011 | R |
ypt3277_L6_I027 | A |
ypt3278_L3_I028 | G |
ypt3289_L8_I021 | G |
ypt47_L2_I029 | R |
ypt50_L2_I030 | R |
ypt51_L2_I031 | G |
ypt53_L2_I032 | R |
ypt55_L1_I033 | R |
ypt890 | R |
ypt891 | R |
ypt896_L2_I047 | R |
ypt897_L3_I048 | R |
ypt898 | G |
ypt899_L6_I051 | R |
ypt901_L1_I052 | R |
ypt902_L1_I053 | R |
ypt903_L2_I054 | R |
ypt904_L4_I055 | R |
ypt905_L6_I056 | R |
ypt906_L3_I001 | R |
ypt907_L6_I002 | R |
ypt908_L1_I003 | G |
ypt909_L5_I004 | R |
ypt911_L6_I006 | G |
ypt912 | A |
ypt913 | G |
ypt915 | G |
ypt917 | R |
ypt918_L3_I007 | R |
ypt919_L4_I008 | R |
ypt920_L5_I010 | G |
ypt921_L8_I011 | G |
ypt922_L4_I012 | R |
ypt923_L2_I051 | R |
ypt924_L3_I021 | G |
ypt925_L2_I022 | R |
ypt928 | R |
ypt929 | R |
ypt930 | G |
ypt931 | A |
ypt932 | A |
ypt933 | A |
ypt936 | A |
ypt937 | A |
ypt938x | R |
ypt939_L5_I025 | G |
ypt940_L4_I026 | A |
ypt941_L5_I027 | R |
ypt942_L7_I028 | R |
ypt943 | R |
ypt944_L3_I030 | R |
ypt945_L4_I031 | R |
ypt946_L4_I032 | R |
ypt947_L5_I033 | R |
ypt948_L2_I034 | R |
ypt949_L3_I035 | R |
ypt950_L5_I036 | R |
ypt951 | R |
ypt952 | A |
ypt953 | R |
ypt954 | R |
ypt955 | R |
ypt956x | R |
ypt957 | R |
ypt958 | R |
ypt959 | G |
ypt960 | R |
ypt961 | R |
ypt962 | R |
ypt963 | R |
ypt964 | G |
ypt965 | G |
ypt966 | R |
ypt971 | R |
ypt972x | R |
ypt973_L4_I037 | R |
ypt974 | R |
ypt975_L8_I039 | R |
ypt976_L7_I040 | G |
ypt977_L2_I041 | R |
ypt978_L2_I052 | R |
ypt979_L6_I042 | R |
ypt980_L3_I043 | G |
ypt981_L2_I044 | G |
ypt982_L4_I045 | G |
ypt984 | G |
yptwj | G |
147209 | G |
147830 | R |
GLF_denovo | R |
Gallus_Sonneriatii_d | R |
Ypt4000 | R |
Ypt4879 | R |
Ypt4880 | R |
4. Population Genetics Analyses
Population | Sample # | Allele:Frequency | Genotype:Frequency |
---|---|---|---|
Afghan | 11 | G:0.55; A:0.45; | AG:0.91; GG:0.09; |
Beijing | 11 | G:0.50; A:0.50; | AG:1.00; |
Bengal | 15 | G:0.67; A:0.33; | GG:0.40; AG:0.53; AA:0.07; |
Cornish_UK | 1 | G:0.50; A:0.50; | AG:1.00; |
Europe_egg | 13 | G:0.50; A:0.50; | AG:1.00; |
Europe_meat | 4 | G:0.67; A:0.33; | GG:0.33; AG:0.67; |
Gallus_lafayetii | 4 | G:0; A:0; | NN:; |
Gallus_sonnerattii | 3 | G:0.00; A:1.00; | AA:1.00; |
G.g.bankiva | 4 | G:0.25; A:0.75; | AG:0.50; AA:0.50; |
G.g.gallus | 6 | G:0.30; A:0.70; | GG:0.20; AG:0.20; AA:0.60; |
G.g.jabouillei | 27 | G:0.52; A:0.48; | GG:0.11; AG:0.81; AA:0.07; |
G.g.murghi | 68 | G:0.48; A:0.52; | AG:0.59; GG:0.19; AA:0.22; |
G.g.spadiceus | 36 | G:0.67; A:0.33; | AG:0.59; GG:0.38; AA:0.03; |
G.g.spadiceus_Thai | 9 | G:0.56; A:0.44; | AG:0.62; GG:0.25; AA:0.12; |
Guangxi | 6 | G:0.50; A:0.50; | AG:1.00; |
Guangzhou | 6 | G:0.58; A:0.42; | AG:0.83; GG:0.17; |
G.varius | 12 | G:0.00; A:1.00; | AA:1.00; |
Hainan | 1 | G:0.50; A:0.50; | AG:1.00; |
Henan | 8 | G:0.69; A:0.31; | AA:0.12; GG:0.50; AG:0.38; |
India | 52 | G:0.64; A:0.36; | AG:0.64; AA:0.04; GG:0.32; |
Indonesia | 36 | G:0.46; A:0.54; | AG:0.69; GG:0.11; AA:0.20; |
Iran | 182 | G:0.55; A:0.45; | AG:0.77; GG:0.16; AA:0.06; |
Jiangsu | 10 | G:0.62; A:0.38; | GG:0.50; AG:0.25; AA:0.25; |
Jiangxi | 30 | G:0.71; A:0.29; | AG:0.59; GG:0.41; |
Liaoning | 8 | G:0.69; A:0.31; | AG:0.38; GG:0.50; AA:0.12; |
Pakistan | 37 | G:0.53; A:0.47; | AG:0.56; AA:0.19; GG:0.25; |
Rhode_USA | 1 | G:0.50; A:0.50; | AG:1.00; |
Shandong | 18 | G:0.56; A:0.44; | AG:0.65; GG:0.24; AA:0.12; |
Shanxi | 8 | G:0.36; A:0.64; | AA:0.29; AG:0.71; |
Srilanka | 7 | G:0.50; A:0.50; | AG:0.71; GG:0.14; AA:0.14; |
Taiwan | 1 | G:0.50; A:0.50; | AG:1.00; |
Thailand | 6 | G:0.50; A:0.50; | AG:0.67; GG:0.17; AA:0.17; |
Tibet | 113 | G:0.56; A:0.44; | AG:0.69; AA:0.10; GG:0.21; |
Vietnan | 7 | G:0.79; A:0.21; | GG:0.57; AG:0.43; |
WhitePlymouth_USA | 1 | G:0.50; A:0.50; | AG:1.00; |
Xinjiang | 30 | G:0.60; A:0.40; | AG:0.80; GG:0.20; |
Yuanbao | 24 | G:0.67; A:0.33; | AG:0.67; GG:0.33; |
Yunnan | 49 | G:0.56; A:0.44; | AG:0.80; GG:0.16; AA:0.04; |
5. Genotype-Phenotype Information
Chr | Position | RSID | Species/Population | Trait | Effect Allele | P-value | Reported Gene(s) Symbol | PMID |
---|