ChickenSD

ChickenSD / Individual SNP / ggaS0043002533625

Detail information of ggaS0043002533625

1.General Information

SNP ID: ggaS0043002533625
Organism: Gallus gallus
Individual: 17S_L3_I024

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 17S_L3_I024
chr25 355 G C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0043002533625 ENSGALG00000009011 SMG5 downstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S G
101S_L1_I028 G
102S_L3_I037 C
103S G
104S_L7_I029 G
105S_L3_I039 G
106S_L6_I030 S
107S_L2_I031 G
108S_L6_I032 G
109S_L5_I033 G
110S_L4_I034 G
112S_L3_I035 G
113S_L1_I036 G
116S_L6_I038 C
117S_L2_I039 G
119S_L3_I041 G
11S G
120S_L1_I041 C
122S_L4_I043 S
123S_L4_I044 G
124S_L2_I048 C
125S_L3_I050 G
126S_L3_I051 C
127S_L2_I045 G
128S_L1_I042 S
129S_L3_I043 C
12S_L4_I011 G
130S_L4_I044 C
131S_L2_I045 C
132S_L2_I046 G
134S_L2_I047 G
135S_L3_I048 G
13S_L7_I012 C
14S_L2_I021 C
15S_L6_I022 C
16S_L5_I023 C
18833 G
19297 C
19912 G
19S_L4_I026 G
1S C
21S_L6_I028 G
22S_L6_I029 S
23S_L2_I030 G
24S_L4_I031 C
25S_L3_I032 S
26S G
27S_L4_I034 S
28S_L4_I035 G
29S_L3_I036 C
2S G
30S_L2_I037 G
32S_L1_I039 S
33S G
35S_L5_I041 G
37S_L2_I043 G
38S_L6_I044 G
39S_L6_I053 G
3S_L4_I003 C
40S_L2_I054 S
41S_L5_I045 S
43S G
44S_L4_I001 G
45S_L2_I002 S
46S_L4_I003 G
47S_L3_I046 G
48S_L1_I004 S
49S_L1_I005 G
4S_L4_I004 C
50S_L1_I047 S
51S_L6_I048 S
52S_L2_I050 C
53S_L2_I006 G
54S_L2_I007 G
55S_L1_I008 G
56S_L1_I010 C
57S_L3_I046 S
58S_L4_I051 G
59S_L5_I052 C
5S S
60S_L5_I053 C
61S_L8_I054 G
62S_L8_I055 G
63S_L5_I056 G
64S_L4_I001 C
65S_L5_I002 G
66S_L2_I003 S
67S_L1_I011 G
68S_L3_I012 G
69S S
6S C
71S_L3_I023 G
72S_L1_I024 G
73S_L1_I025 C
74S_L4_I026 C
75S_L3_I027 G
77S_L4_I029 C
78S_L4_I030 G
79S_L2_I031 C
7S_L4_I007 S
83S_L3_I033 G
84S_L5_I006 C
85S_L5_I007 C
87S_L5_I010 G
88S_L4_I011 S
89S_L6_I012 C
90S_L4_I021 S
95S_L8_I025 C
96S_L4_I026 G
97S_L8_I027 G
98S_L3_I034 C
99S_L2_I035 S
9S C
A1 C
A10 G
A12 G
A14 G
A3 G
A8 C
BKL2 C
BLB1_L2_I007 C
BLB2_L2_I008 C
BLO1 C
BLO11 C
BLO15 C
BLO2 C
BLO3_L4_I022 C
BOJA2 C
GVF C
India1 G
India11 S
India13 G
India15 G
India17 C
India19 S
India25 G
India29 C
India31 C
India33 C
India35 C
India37 S
India39 G
India41 G
India43 S
India45 G
India47 G
India5 C
India55 S
India57 G
India59 G
India61 G
India7 S
India9 C
L2 G
N1 C
N11 G
N13 S
N18 C
N3 G
N7 G
N8 G
S-f1_L4_I106 G
S-f2_I107 G
S-f3_I108 C
S-f4_L4_I109 G
S-m1_I101 S
S-m4_L2_I104 G
S-m5_I105 G
S6 G
SAMN02486156 G
SAMN02486157 G
SAMN02486158 G
SAMN02486161 S
SAMN02486162 C
SAMN02486164 C
SAMN02486165 C
SAMN02486166 G
SAMN02486167 S
Silkia G
T2 S
T3 G
T5 G
TD12 C
TD15 S
TD22 C
TD27 C
TD6 S
TD9 G
Tibet S
Xcelris_101 C
Xcelris_104 C
Xcelris_105 C
Xcelris_10B G
Xcelris_112 S
Xcelris_113 S
Xcelris_114 C
Xcelris_11B C
Xcelris_12 C
Xcelris_120 C
Xcelris_127 S
Xcelris_128 S
Xcelris_129 C
Xcelris_13 G
Xcelris_13B C
Xcelris_14 C
Xcelris_141 G
Xcelris_142 G
Xcelris_143 S
Xcelris_144 G
Xcelris_14A G
Xcelris_14B G
Xcelris_174 S
Xcelris_176 G
Xcelris_1B C
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 S
Xcelris_227 C
Xcelris_276 C
Xcelris_278 C
Xcelris_279 C
Xcelris_2A C
Xcelris_2B G
Xcelris_331 C
Xcelris_332 C
Xcelris_333 C
Xcelris_336 C
Xcelris_339 C
Xcelris_340 C
Xcelris_341 C
Xcelris_36 C
Xcelris_377 C
Xcelris_378 C
Xcelris_379 C
Xcelris_380 C
Xcelris_381 C
Xcelris_382 C
Xcelris_383 C
Xcelris_384 C
Xcelris_385 C
Xcelris_392 C
Xcelris_394 S
Xcelris_44 S
Xcelris_4A G
Xcelris_4B G
Xcelris_5A S
Xcelris_5B C
Xcelris_67 C
Xcelris_6B G
Xcelris_7 C
Xcelris_77 C
Xcelris_8 C
Xcelris_84 C
Xcelris_8A G
Xcelris_90 C
Xcelris_98 C
Xcelris_MT-134 C
Xcelris_MT-18 C
Xcelris_MT-38 C
Xcelris_MT-48 C
Xcelris_MT-6 C
Xcelris_MT-9 G
Xcelris_MT-99 C
Y1-f1_L5_I119 G
Y1-f2_L6_I121 G
Y1-m2_L4_I122 S
Y1-m3_L7_I123 C
Y1-m5_L7_I102 G
YPt565 G
YPt601 C
YPt610 G
YPt637 G
YPt641 S
YPt648 G
You1 C
You3_L7_I1000005 G
Ypt566 G
Ypt567 S
Ypt568 G
Ypt569 S
Ypt570 S
Ypt571 G
Ypt572 S
Ypt573 S
Ypt574 G
Ypt575 G
Ypt576 S
Ypt577 G
Ypt578 C
Ypt579 S
Ypt580 G
Ypt581 G
Ypt582 S
Ypt583 S
Ypt584 C
Ypt585 S
Ypt586 C
Ypt587 S
Ypt588 S
Ypt589 G
Ypt590 C
Ypt591 S
Ypt592 S
Ypt593 S
Ypt594 C
Ypt597 C
Ypt598 S
Ypt599 C
Ypt600 C
Ypt602 S
Ypt603 S
Ypt606 S
Ypt607 G
Ypt608 G
Ypt622 C
Ypt623 S
Ypt624 C
Ypt626 S
Ypt638 S
Ypt640 C
Ypt642 G
Ypt643 G
Ypt645 G
Ypt646 G
Ypt647 S
Yt516 G
Yt517 G
Yt518 S
Yt519 G
Yt520 G
Yt521 S
Yt523 G
Yt524 G
Yt525 G
Yt526 S
Yt527 S
Yt528 S
Yt529 S
Yt530 C
Yt531 S
Yt536 G
Yt538 G
Yt539 G
Yt540 S
ZJ1 S
ZJ2 G
ZJ3 G
ZJ4 G
india3 S
production C
ypt169_L3_I011 G
ypt173_L2_I022 G
ypt2043_L1_I037 G
ypt2053_L6_I004 C
ypt2063_L6_I005 C
ypt2086 C
ypt2087 C
ypt2091 C
ypt2092 C
ypt2093 C
ypt2095 C
ypt2098 C
ypt2100 C
ypt2101 C
ypt2102 C
ypt2103 C
ypt2106 S
ypt2107 C
ypt2108 C
ypt2109 G
ypt2110 G
ypt2112 C
ypt2114 C
ypt2115 G
ypt2116 G
ypt2117 G
ypt2119 G
ypt2122 G
ypt2124_L4_I052 G
ypt2126_L3_I053 G
ypt2127_L1_I036 G
ypt2128_L6_I054 G
ypt2144_L6_I055 G
ypt2145_L6_I056 S
ypt2163 G
ypt2164 C
ypt2165 S
ypt2166 C
ypt2167 G
ypt2168 S
ypt2169 G
ypt2171 S
ypt2172 S
ypt2173 C
ypt2174 G
ypt2175 C
ypt2176 G
ypt2177 G
ypt2178 C
ypt217_L2_I024 S
ypt2184 G
ypt2185 G
ypt2186 G
ypt2189 C
ypt2190 S
ypt2201 G
ypt2205 C
ypt2209 G
ypt2215 S
ypt2216 G
ypt2217 S
ypt2219 G
ypt221_L3_I042 G
ypt2220 G
ypt2221 C
ypt2222 G
ypt222_L3_I027 G
ypt2437 G
ypt2438 S
ypt2439 G
ypt2440 G
ypt2441 G
ypt2443 G
ypt2445 G
ypt2446 G
ypt2448 C
ypt2449 G
ypt2459 G
ypt2468 G
ypt2496 C
ypt2498 S
ypt2499 G
ypt2500 C
ypt2503 G
ypt2504 C
ypt2507 G
ypt2512 S
ypt2516 C
ypt2521 G
ypt2523 C
ypt2534 C
ypt2541 G
ypt2544 G
ypt2545 G
ypt2546 C
ypt2547 C
ypt2552 C
ypt2562 C
ypt2569 G
ypt2571 C
ypt2572 G
ypt2573 G
ypt2574 C
ypt258_L3_I028 G
ypt2598 S
ypt259_L2_I029 G
ypt2601 C
ypt2606 S
ypt2608 G
ypt2615 S
ypt2622 G
ypt2623 C
ypt2624 G
ypt2625 G
ypt2628 S
ypt2629 G
ypt262_L3_I030 G
ypt2636 G
ypt2638 G
ypt263_L3_I031 G
ypt2640 C
ypt2641 S
ypt2643 S
ypt2646 G
ypt264_L3_I032 G
ypt2650 S
ypt2653 G
ypt2656 G
ypt2657 S
ypt2658 G
ypt2661 C
ypt2664 S
ypt2665 S
ypt2669 C
ypt2670 G
ypt2671 G
ypt2672 G
ypt2673 C
ypt2678 S
ypt2706 G
ypt2722 C
ypt2724 S
ypt2729 C
ypt2733 G
ypt2739 G
ypt2740 G
ypt2745 C
ypt2746 G
ypt2760 S
ypt2761 G
ypt2765 G
ypt2766 S
ypt2775 C
ypt2781 G
ypt2782 G
ypt2783 C
ypt2784 C
ypt2785 G
ypt2787 C
ypt2788 G
ypt2789 C
ypt2790 S
ypt2800 G
ypt2808 C
ypt2810 C
ypt2813 G
ypt2814 S
ypt2815 C
ypt2816 S
ypt2822 C
ypt2823 G
ypt2824 G
ypt2825 C
ypt2826 S
ypt2827 C
ypt2828 C
ypt2831 G
ypt2832 G
ypt2842 G
ypt2843 G
ypt2849 C
ypt2859 C
ypt2860 C
ypt2861 C
ypt2862 C
ypt2863 C
ypt2870 C
ypt2871 C
ypt2887 C
ypt2888 C
ypt2891_L3_I041 C
ypt2892 G
ypt2893_L3_I025 S
ypt2894 G
ypt2895_L3_I026 G
ypt2902 C
ypt2909 S
ypt2912 G
ypt2929 C
ypt2930 C
ypt3001 C
ypt3002 C
ypt3003 S
ypt3004 G
ypt3005 G
ypt3006 S
ypt3007 G
ypt3008 G
ypt3009 C
ypt3011 S
ypt3012 G
ypt3016 G
ypt3017 G
ypt3028 S
ypt3038 C
ypt3040 G
ypt3041 C
ypt3042 G
ypt3043 S
ypt3044 C
ypt3045 G
ypt3047 G
ypt3050 G
ypt3051 G
ypt3052 G
ypt3061 C
ypt3069 G
ypt3072 S
ypt3135 G
ypt3136 G
ypt3137 G
ypt3138 G
ypt3139 G
ypt3140 G
ypt3143 S
ypt3144_L3_I039 C
ypt3146 C
ypt3149_L2_I034 C
ypt3150_L8_I023 G
ypt3159_L6_I035 S
ypt3160_L8_I024 G
ypt3162_L6_I036 S
ypt3179_L8_I025 G
ypt3180 G
ypt3182_L1_I039 C
ypt3189_L1_I040 S
ypt3190_L8_I026 C
ypt3191_L2_I041 C
ypt3195_L1_I042 S
ypt3196_L2_I043 G
ypt3197_L1_I044 S
ypt3204_L7_I046 C
ypt3205_L2_I047 C
ypt3206_L1_I048 C
ypt3210_L6_I051 G
ypt3211_L6_I052 S
ypt3212_L4_I028 S
ypt3213_L8_I029 C
ypt3219_L1_I030 C
ypt3220_L1_I031 C
ypt3221_L1_I032 C
ypt3222_L1_I033 S
ypt3224_L8_I043 S
ypt3225_L2_I053 C
ypt3228-7_L1_I034 G
ypt3238_L3_I046 C
ypt3239_L1_I035 C
ypt3240_L6_I054 G
ypt3241_L6_I055 G
ypt3243_L8_I047 S
ypt3245 G
ypt3246_L6_I050 G
ypt3247_L6_I051 G
ypt3257_L1_I056 S
ypt3259_L6_I002 G
ypt3261_L7_I004 C
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 S
ypt3274A_L7_I011 C
ypt3276_L7_I021 C
ypt3277_L6_I027 C
ypt3278_L3_I028 C
ypt47_L2_I029 C
ypt50_L2_I030 G
ypt53_L2_I032 C
ypt55_L1_I033 C
ypt890 C
ypt896_L2_I047 C
ypt897_L3_I048 C
ypt898 C
ypt899_L6_I051 C
ypt900_L2_I050 C
ypt901_L1_I052 C
ypt902_L1_I053 C
ypt903_L2_I054 C
ypt904_L4_I055 C
ypt905_L6_I056 C
ypt906_L3_I001 C
ypt907_L6_I002 C
ypt908_L1_I003 C
ypt909_L5_I004 C
ypt910_L3_I005 C
ypt911_L6_I006 S
ypt912 S
ypt913 G
ypt915 G
ypt917 S
ypt918_L3_I007 C
ypt919_L4_I008 C
ypt921_L8_I011 G
ypt922_L4_I012 C
ypt923_L2_I051 C
ypt924_L3_I021 C
ypt925_L2_I022 C
ypt926_L2_I023 G
ypt929 C
ypt931 C
ypt932 C
ypt933 C
ypt934x C
ypt936 C
ypt937 C
ypt939_L5_I025 G
ypt940_L4_I026 C
ypt941_L5_I027 G
ypt942_L7_I028 G
ypt945_L4_I031 S
ypt946_L4_I032 C
ypt948_L2_I034 G
ypt949_L3_I035 G
ypt950_L5_I036 C
ypt953 G
ypt954 G
ypt955 S
ypt956x G
ypt957 C
ypt958 G
ypt959 G
ypt960 S
ypt961 G
ypt962 S
ypt963 S
ypt964 G
ypt965 S
ypt966 S
ypt971 G
ypt972x G
ypt973_L4_I037 S
ypt974 G
ypt975_L8_I039 C
ypt976_L7_I040 S
ypt977_L2_I041 G
ypt978_L2_I052 G
ypt979_L6_I042 S
ypt980_L3_I043 S
ypt981_L2_I044 C
ypt982_L4_I045 S
ypt984 C
yptwj S
147209 S
147830 G
GLF_denovo C
Gallus_Sonneriatii_d S
Ypt4000 S
Ypt4879 S
Ypt4880 C