ChickenSD

ChickenSD / Individual SNP / ggaS0042002597961

Detail information of ggaS0042002597961

1.General Information

SNP ID: ggaS0042002597961
Organism: Gallus gallus
Individual: 16S_L5_I023

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: A

3.Reference Map information

Chrom Position Reference 16S_L5_I023
chr27 3813 T A

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0042002597961 ENSGALG00000000149 - downstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S T
101S_L1_I028 W
102S_L3_I037 T
103S T
104S_L7_I029 W
105S_L3_I039 T
106S_L6_I030 A
107S_L2_I031 T
108S_L6_I032 W
109S_L5_I033 T
10S_L1_I052 T
110S_L4_I034 W
111S_L3_I047 T
112S_L3_I035 T
113S_L1_I036 A
114S_L3_I037 T
116S_L6_I038 A
117S_L2_I039 T
118S_L4_I040 T
119S_L3_I041 T
11S W
120S_L1_I041 T
121S_L3_I042 T
122S_L4_I043 T
123S_L4_I044 T
124S_L2_I048 A
125S_L3_I050 T
126S_L3_I051 T
127S_L2_I045 W
128S_L1_I042 W
129S_L3_I043 W
12S_L4_I011 T
130S_L4_I044 T
131S_L2_I045 W
132S_L2_I046 T
133S_L8_I046 T
134S_L2_I047 T
135S_L3_I048 W
13S_L7_I012 T
14S_L2_I021 T
15S_L6_I022 W
17S_L3_I024 T
18833 T
18S_L7_I025 T
19297 T
19912 T
19S_L4_I026 T
1S T
20736 T
20S_L7_I027 T
21S_L6_I028 W
22S_L6_I029 T
23S_L2_I030 T
24S_L4_I031 T
25S_L3_I032 T
26S T
27S_L4_I034 W
28S_L4_I035 T
29S_L3_I036 T
2S T
30S_L2_I037 T
31S_L3_I038 T
32S_L1_I039 W
33S W
35S_L5_I041 W
36S_L5_I042 T
37S_L2_I043 T
38S_L6_I044 T
39S_L6_I053 T
3S_L4_I003 T
40S_L2_I054 T
41S_L5_I045 T
42S_L3_I055 T
43S T
44S_L4_I001 T
45S_L2_I002 W
46S_L4_I003 T
47S_L3_I046 T
48S_L1_I004 T
49S_L1_I005 T
4S_L4_I004 T
50S_L1_I047 T
51S_L6_I048 T
52S_L2_I050 T
53S_L2_I006 T
54S_L2_I007 T
55S_L1_I008 T
56S_L1_I010 W
57S_L3_I046 W
58S_L4_I051 T
59S_L5_I052 W
5S T
60S_L5_I053 T
61S_L8_I054 T
62S_L8_I055 T
63S_L5_I056 T
64S_L4_I001 A
65S_L5_I002 T
66S_L2_I003 T
67S_L1_I011 T
68S_L3_I012 T
69S T
6S W
70S T
71S_L3_I023 T
72S_L1_I024 W
73S_L1_I025 A
74S_L4_I026 T
75S_L3_I027 W
76S_L1_I028 W
77S_L4_I029 T
78S_L4_I030 T
79S_L2_I031 T
7S_L4_I007 A
80S_L3_I004 T
81S_L1_I005 T
82S W
83S_L3_I033 T
84S_L5_I006 W
85S_L5_I007 T
86S_L5_I008 T
87S_L5_I010 T
88S_L4_I011 T
89S_L6_I012 T
90S_L4_I021 T
91S_L4_I022 W
92S_L5_I023 T
93S_L7_I024 T
95S_L8_I025 T
96S_L4_I026 T
97S_L8_I027 A
98S_L3_I034 W
99S_L2_I035 W
9S T
A1 T
A10 T
A12 T
A14 T
A3 T
A8 T
BKL2 T
BLB1_L2_I007 A
BLB2_L2_I008 A
BLO11 A
BLO15 A
BLO2 A
BLO3_L4_I022 A
BOJA2 A
BYW3_L3_I033 A
BYW5_L2_I010 A
GVF A
India1 W
India11 A
India13 T
India15 A
India17 T
India21 A
India23 T
India25 T
India27 W
India29 T
India31 T
India33 W
India35 T
India37 W
India39 A
India41 W
India43 W
India45 T
India47 W
India5 T
India51 W
India55 T
India57 W
India59 T
India61 T
India7 W
India9 T
L2 T
N1 T
N11 A
N13 T
N18 T
N3 A
N5 A
N7 W
S-f1_L4_I106 T
S-f2_I107 T
S-f3_I108 T
S-f4_L4_I109 W
S-m1_I101 T
S-m2_I102 W
S-m3_I103 W
S-m4_L2_I104 W
S-m5_I105 W
S6 A
SAMN02486156 T
SAMN02486157 W
SAMN02486158 W
SAMN02486159 T
SAMN02486160 T
SAMN02486161 W
SAMN02486162 W
SAMN02486163 T
SAMN02486164 W
SAMN02486165 W
SAMN02486166 T
SAMN02486167 W
Silkia W
T2 T
T5 T
TD12 T
TD15 A
TD27 A
TD30 T
TD6 A
TD9 T
Tibet A
Xcelris_10 W
Xcelris_101 A
Xcelris_104 T
Xcelris_105 T
Xcelris_10A T
Xcelris_10B T
Xcelris_112 T
Xcelris_113 W
Xcelris_114 T
Xcelris_11B T
Xcelris_120 T
Xcelris_127 T
Xcelris_128 T
Xcelris_129 A
Xcelris_12A T
Xcelris_13 W
Xcelris_137 W
Xcelris_13B T
Xcelris_143 A
Xcelris_144 T
Xcelris_14A T
Xcelris_14B T
Xcelris_174 A
Xcelris_175 T
Xcelris_1A W
Xcelris_219 W
Xcelris_221 W
Xcelris_222 A
Xcelris_224 T
Xcelris_226 T
Xcelris_227 T
Xcelris_278 A
Xcelris_280 A
Xcelris_2A T
Xcelris_2B W
Xcelris_3 T
Xcelris_331 T
Xcelris_332 T
Xcelris_333 T
Xcelris_335 T
Xcelris_336 W
Xcelris_339 A
Xcelris_340 A
Xcelris_341 T
Xcelris_377 A
Xcelris_378 T
Xcelris_379 T
Xcelris_381 W
Xcelris_382 T
Xcelris_383 A
Xcelris_384 W
Xcelris_392 T
Xcelris_394 T
Xcelris_44 A
Xcelris_4A T
Xcelris_4B T
Xcelris_5 T
Xcelris_5B T
Xcelris_67 W
Xcelris_6A T
Xcelris_77 T
Xcelris_8 A
Xcelris_84 T
Xcelris_90 T
Xcelris_97 T
Xcelris_98 W
Xcelris_MT-134 T
Xcelris_MT-18 A
Xcelris_MT-48 T
Xcelris_MT-85 T
Xcelris_MT-9 T
Xcelris_MT-99 T
Y1-f1_L5_I119 T
Y1-f2_L6_I121 T
Y1-f3_L7_I101 T
Y1-m1_L6_I120 T
Y1-m2_L4_I122 T
Y1-m3_L7_I123 T
Y1-m4_I124 T
Y1-m5_L7_I102 T
YPt565 W
YPt601 T
YPt604 W
YPt609 T
YPt610 W
YPt637 T
YPt641 A
YPt648 W
You1 T
You3_L7_I1000005 W
Ypt566 A
Ypt567 T
Ypt568 W
Ypt569 T
Ypt570 T
Ypt571 T
Ypt572 W
Ypt573 W
Ypt574 T
Ypt575 W
Ypt576 W
Ypt577 W
Ypt578 T
Ypt579 T
Ypt580 T
Ypt581 T
Ypt582 W
Ypt584 T
Ypt585 A
Ypt586 T
Ypt587 T
Ypt588 T
Ypt589 T
Ypt590 T
Ypt591 T
Ypt592 T
Ypt593 T
Ypt594 T
Ypt595 T
Ypt596 T
Ypt597 T
Ypt598 T
Ypt599 T
Ypt600 T
Ypt602 T
Ypt603 T
Ypt606 T
Ypt607 T
Ypt608 W
Ypt622 A
Ypt624 A
Ypt626 T
Ypt638 W
Ypt640 T
Ypt646 T
Yt516 T
Yt517 T
Yt518 W
Yt519 T
Yt520 W
Yt522 W
Yt523 W
Yt524 W
Yt525 W
Yt526 W
Yt527 W
Yt528 W
Yt529 A
Yt530 W
Yt531 T
Yt536 T
Yt538 T
Yt539 A
Yt540 W
ZJ1 W
ZJ2 T
ZJ3 W
ZJ4 T
india3 W
india49 W
production T
yp914ypt T
ypt169_L3_I011 T
ypt170_L2_I012 W
ypt171_L2_I021 W
ypt173_L2_I022 W
ypt175_L2_I023 A
ypt2041_L6_I002 W
ypt2043_L1_I037 A
ypt2051_L3_I003 A
ypt2053_L6_I004 T
ypt2063_L6_I005 A
ypt2069_L6_I006 A
ypt2071_L1_I038 W
ypt2082 T
ypt2086 T
ypt2087 T
ypt2091 W
ypt2092 W
ypt2093 A
ypt2094 T
ypt2095 T
ypt2098 T
ypt2100 T
ypt2101 T
ypt2102 T
ypt2103 T
ypt2105 W
ypt2106 W
ypt2107 T
ypt2108 W
ypt2109 W
ypt2110 T
ypt2111 W
ypt2112 T
ypt2114 W
ypt2115 T
ypt2116 T
ypt2117 W
ypt2118 T
ypt2119 T
ypt2120 T
ypt2121 T
ypt2122 W
ypt2124_L4_I052 T
ypt2126_L3_I053 T
ypt2127_L1_I036 T
ypt2128_L6_I054 T
ypt2144_L6_I055 T
ypt2145_L6_I056 T
ypt2146_L6_I001 T
ypt2163 T
ypt2164 T
ypt2166 T
ypt2167 T
ypt2168 T
ypt2169 T
ypt2170 T
ypt2171 T
ypt2172 W
ypt2173 W
ypt2174 W
ypt2175 W
ypt2176 W
ypt2177 A
ypt2178 A
ypt217_L2_I024 W
ypt2184 A
ypt2185 A
ypt2186 T
ypt2187 T
ypt2189 W
ypt2190 A
ypt2191 T
ypt219_L3_I025 T
ypt2200 W
ypt2201 W
ypt2205 T
ypt2209 T
ypt220_L2_I026 W
ypt2214 W
ypt2215 T
ypt2216 T
ypt2217 W
ypt2218 W
ypt2219 T
ypt221_L3_I042 T
ypt2220 W
ypt2221 T
ypt2222 T
ypt222_L3_I027 W
ypt2437 T
ypt2438 A
ypt2439 T
ypt2440 W
ypt2441 T
ypt2442 T
ypt2443 W
ypt2444 T
ypt2445 T
ypt2446 A
ypt2447 T
ypt2448 A
ypt2449 T
ypt2454 T
ypt2459 T
ypt2468 W
ypt2496 T
ypt2497 T
ypt2498 T
ypt2499 T
ypt2500 A
ypt2503 T
ypt2504 T
ypt2507 W
ypt2512 W
ypt2516 W
ypt2521 T
ypt2523 T
ypt2534 W
ypt2541 T
ypt2543 T
ypt2544 T
ypt2545 W
ypt2546 T
ypt2547 T
ypt2552 W
ypt2562 T
ypt2563 T
ypt2569 T
ypt2570 T
ypt2571 T
ypt2572 T
ypt2573 T
ypt2574 T
ypt2575 T
ypt2579 T
ypt258_L3_I028 W
ypt2598 T
ypt259_L2_I029 T
ypt2601 T
ypt2606 T
ypt2608 T
ypt2615 W
ypt2622 T
ypt2623 T
ypt2624 T
ypt2625 T
ypt2627 T
ypt2628 W
ypt2629 W
ypt262_L3_I030 W
ypt2630 T
ypt2636 T
ypt2638 T
ypt263_L3_I031 T
ypt2640 T
ypt2641 T
ypt2643 T
ypt2644 T
ypt2646 T
ypt264_L3_I032 T
ypt2650 W
ypt2653 T
ypt2656 T
ypt2657 T
ypt2658 T
ypt2661 T
ypt2664 T
ypt2665 T
ypt2669 T
ypt2670 T
ypt2671 T
ypt2672 T
ypt2673 W
ypt2678 W
ypt2706 T
ypt2722 W
ypt2724 T
ypt2729 T
ypt2733 T
ypt2739 T
ypt2740 T
ypt2745 A
ypt2746 T
ypt2760 T
ypt2761 T
ypt2765 T
ypt2766 T
ypt2775 W
ypt2780 T
ypt2781 T
ypt2782 W
ypt2783 A
ypt2784 T
ypt2785 W
ypt2786 W
ypt2787 T
ypt2788 T
ypt2789 T
ypt2790 A
ypt2791 T
ypt2792 T
ypt2799 W
ypt2800 T
ypt2808 W
ypt2810 T
ypt2812 T
ypt2813 T
ypt2814 T
ypt2815 T
ypt2816 T
ypt2817 W
ypt2819 T
ypt2821 T
ypt2822 T
ypt2823 T
ypt2824 A
ypt2825 W
ypt2826 W
ypt2827 T
ypt2828 T
ypt2831 T
ypt2832 T
ypt2842 T
ypt2843 T
ypt2849 T
ypt2859 T
ypt2860 A
ypt2861 A
ypt2863 A
ypt2870 A
ypt2871 A
ypt2887 A
ypt2888 A
ypt2889 A
ypt2890_L3_I040 A
ypt2891_L3_I041 A
ypt2892 W
ypt2893_L3_I025 A
ypt2894 T
ypt2895_L3_I026 A
ypt2902 T
ypt2910 A
ypt2911 T
ypt2912 T
ypt2918 W
ypt2929 T
ypt2930 T
ypt3001 W
ypt3002 T
ypt3003 W
ypt3004 A
ypt3005 W
ypt3006 W
ypt3007 T
ypt3008 W
ypt3009 T
ypt3010 W
ypt3011 T
ypt3012 W
ypt3016 T
ypt3017 T
ypt3028 W
ypt3038 T
ypt3040 T
ypt3041 T
ypt3042 A
ypt3043 T
ypt3044 T
ypt3045 A
ypt3046 A
ypt3047 W
ypt3051 T
ypt3052 T
ypt3061 T
ypt3069 W
ypt3072 T
ypt3133 W
ypt3134 W
ypt3135 W
ypt3136 W
ypt3137 A
ypt3138 T
ypt3139 W
ypt3140 W
ypt3141 T
ypt3142 T
ypt3143 W
ypt3144_L3_I039 W
ypt3145 T
ypt3146 W
ypt3149_L2_I034 W
ypt3150_L8_I023 T
ypt3159_L6_I035 W
ypt3160_L8_I024 W
ypt3162_L6_I036 T
ypt3180 T
ypt3182_L1_I039 T
ypt3189_L1_I040 A
ypt3191_L2_I041 A
ypt3193_L1_I027 T
ypt3195_L1_I042 A
ypt3196_L2_I043 T
ypt3197_L1_I044 A
ypt3198_L2_I045 W
ypt3204_L7_I046 A
ypt3205_L2_I047 T
ypt3206_L1_I048 T
ypt3207_L6_I050 T
ypt3210_L6_I051 T
ypt3211_L6_I052 T
ypt3212_L4_I028 W
ypt3213_L8_I029 T
ypt3219_L1_I030 T
ypt3221_L1_I032 T
ypt3222_L1_I033 T
ypt3224_L8_I043 T
ypt3225_L2_I053 A
ypt3226_L3_I044 T
ypt3228-7_L1_I034 W
ypt3229_L8_I045 W
ypt3238_L3_I046 T
ypt3243_L8_I047 A
ypt3245 T
ypt3246_L6_I050 T
ypt3247_L6_I051 T
ypt3257_L1_I056 A
ypt3258_L3_I001 T
ypt3260_L6_I003 W
ypt3262_L7_I005 W
ypt3269_L7_I006 W
ypt3270_L1_I007 A
ypt3271_L7_I008 T
ypt3272_L7_I010 T
ypt3274A_L7_I011 T
ypt3277_L6_I027 A
ypt3289_L8_I021 A
ypt47_L2_I029 T
ypt50_L2_I030 W
ypt51_L2_I031 T
ypt53_L2_I032 T
ypt55_L1_I033 T
ypt890 T
ypt891 T
ypt896_L2_I047 W
ypt897_L3_I048 A
ypt898 A
ypt899_L6_I051 T
ypt901_L1_I052 A
ypt902_L1_I053 T
ypt903_L2_I054 T
ypt905_L6_I056 W
ypt906_L3_I001 T
ypt907_L6_I002 A
ypt908_L1_I003 W
ypt910_L3_I005 T
ypt911_L6_I006 T
ypt912 A
ypt913 T
ypt915 T
ypt916 T
ypt918_L3_I007 T
ypt919_L4_I008 W
ypt920_L5_I010 T
ypt923_L2_I051 T
ypt924_L3_I021 A
ypt925_L2_I022 T
ypt929 T
ypt930 T
ypt931 W
ypt932 T
ypt933 A
ypt936 T
ypt938x T
ypt939_L5_I025 T
ypt940_L4_I026 T
ypt941_L5_I027 T
ypt942_L7_I028 T
ypt943 T
ypt944_L3_I030 T
ypt945_L4_I031 T
ypt946_L4_I032 T
ypt947_L5_I033 T
ypt948_L2_I034 T
ypt949_L3_I035 W
ypt950_L5_I036 T
ypt951 W
ypt952 T
ypt953 W
ypt954 T
ypt955 A
ypt956x W
ypt957 T
ypt958 W
ypt959 A
ypt960 T
ypt961 W
ypt962 T
ypt963 T
ypt964 T
ypt965 W
ypt966 W
ypt971 T
ypt972x W
ypt973_L4_I037 W
ypt974 W
ypt975_L8_I039 T
ypt976_L7_I040 T
ypt977_L2_I041 T
ypt978_L2_I052 T
ypt979_L6_I042 W
ypt981_L2_I044 T
ypt982_L4_I045 A
ypt984 T
yptwj T
147209 T
147830 T
GLF_denovo T
Gallus_Sonneriatii_d T
Ypt4000 T
Ypt4879 T
Ypt4880 T