ggaS0041001466995

Detail information of ggaS0041001466995

1.General Information

SNP ID:	ggaS0041001466995
Organism:	Gallus gallus
Individual:	15S_L6_I022

2.Allele information

Platform:	SOLEXA
Method:	sequence
SNP Class:	SNP
Genotype:	C

3.Reference Map information

Chrom	Position	Reference	15S_L6_I022
chr16	10596	T	C

4.Gene information

Var ID	Gene ID	Transcript ID	Gene Symbol	Variant Effect	Biotype	cDNA Position	Allele Change	Protein ID	Protein Position	Residue Change
ggaS0041001466995	ENSGALG00000019831		LTB4R2	upstream_gene_variant			=>			=>
ggaS0041001466995	ENSGALG00000027865		CD1.2	downstream_gene_variant			=>			=>

5.Individual Genotype

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Individual	Genotype
100S	T
101S_L1_I028	T
102S_L3_I037	T
103S	T
104S_L7_I029	Y
105S_L3_I039	C
106S_L6_I030	T
107S_L2_I031	Y
108S_L6_I032	Y
109S_L5_I033	C
10S_L1_I052	C
110S_L4_I034	T
111S_L3_I047	T
112S_L3_I035	Y
113S_L1_I036	T
114S_L3_I037	T
116S_L6_I038	C
117S_L2_I039	T
118S_L4_I040	Y
119S_L3_I041	Y
11S	Y
120S_L1_I041	T
121S_L3_I042	Y
122S_L4_I043	Y
123S_L4_I044	T
124S_L2_I048	T
125S_L3_I050	T
126S_L3_I051	Y
127S_L2_I045	C
128S_L1_I042	T
129S_L3_I043	T
12S_L4_I011	Y
130S_L4_I044	Y
131S_L2_I045	Y
132S_L2_I046	Y
133S_L8_I046	T
134S_L2_I047	T
135S_L3_I048	T
13S_L7_I012	Y
14S_L2_I021	T
16S_L5_I023	T
17S_L3_I024	Y
18833	T
18S_L7_I025	T
19297	Y
19912	Y
19S_L4_I026	Y
1S	T
20736	C
20S_L7_I027	C
21S_L6_I028	Y
22S_L6_I029	C
23S_L2_I030	T
24S_L4_I031	T
25S_L3_I032	C
26S	T
27S_L4_I034	Y
28S_L4_I035	T
29S_L3_I036	T
2S	T
30S_L2_I037	T
31S_L3_I038	Y
32S_L1_I039	T
33S	T
35S_L5_I041	T
36S_L5_I042	T
37S_L2_I043	T
38S_L6_I044	T
39S_L6_I053	T
3S_L4_I003	Y
40S_L2_I054	Y
41S_L5_I045	T
42S_L3_I055	Y
43S	T
44S_L4_I001	Y
45S_L2_I002	C
46S_L4_I003	Y
47S_L3_I046	Y
48S_L1_I004	C
49S_L1_I005	Y
4S_L4_I004	C
50S_L1_I047	Y
51S_L6_I048	Y
52S_L2_I050	Y
53S_L2_I006	T
54S_L2_I007	T
55S_L1_I008	T
56S_L1_I010	T
57S_L3_I046	Y
58S_L4_I051	T
59S_L5_I052	T
5S	T
60S_L5_I053	T
61S_L8_I054	C
62S_L8_I055	Y
63S_L5_I056	T
64S_L4_I001	T
65S_L5_I002	T
66S_L2_I003	C
67S_L1_I011	T
68S_L3_I012	T
69S	T
6S	Y
70S	T
71S_L3_I023	Y
72S_L1_I024	C
73S_L1_I025	Y
74S_L4_I026	C
75S_L3_I027	Y
76S_L1_I028	T
77S_L4_I029	Y
78S_L4_I030	Y
79S_L2_I031	Y
7S_L4_I007	Y
80S_L3_I004	C
81S_L1_I005	C
82S	Y
83S_L3_I033	C
84S_L5_I006	C
85S_L5_I007	Y
86S_L5_I008	T
87S_L5_I010	C
88S_L4_I011	C
89S_L6_I012	C
90S_L4_I021	C
92S_L5_I023	C
93S_L7_I024	C
95S_L8_I025	Y
96S_L4_I026	T
97S_L8_I027	T
98S_L3_I034	T
99S_L2_I035	T
9S	C
A1	T
A10	T
A12	T
A14	T
A3	T
A8	T
BKL2	C
BLB1_L2_I007	C
BLB2_L2_I008	T
BLO1	C
BLO11	Y
BLO15	Y
BLO2	Y
BLO3_L4_I022	C
BOJA2	T
BYW3_L3_I033	C
BYW5_L2_I010	C
GVF	Y
India1	C
India11	Y
India13	C
India15	Y
India17	C
India19	C
India21	Y
India23	T
India25	T
India27	Y
India29	Y
India31	T
India33	T
India35	C
India37	T
India39	C
India41	T
India43	T
India45	C
India47	T
India5	Y
India51	Y
India57	Y
India59	T
India61	Y
India7	Y
India9	C
L2	C
N1	C
N11	T
N13	T
N18	Y
N3	C
N5	T
N7	T
N8	T
S-f1_L4_I106	Y
S-f2_I107	Y
S-f3_I108	T
S-f4_L4_I109	T
S-m1_I101	C
S-m2_I102	C
S-m3_I103	T
S-m4_L2_I104	C
S-m5_I105	C
S6	Y
SAMN02486156	T
SAMN02486157	Y
SAMN02486158	C
SAMN02486159	C
SAMN02486160	T
SAMN02486161	C
SAMN02486163	Y
SAMN02486164	Y
SAMN02486165	T
SAMN02486166	C
SAMN02486167	T
Silkia	Y
T2	Y
T3	Y
T5	Y
TD1	Y
TD12	Y
TD15	C
TD22	C
TD27	C
TD30	Y
TD6	Y
TD9	C
Tibet	T
Xcelris_101	C
Xcelris_104	C
Xcelris_10A	C
Xcelris_10B	T
Xcelris_112	C
Xcelris_113	C
Xcelris_11B	T
Xcelris_12	T
Xcelris_120	C
Xcelris_13	T
Xcelris_137	C
Xcelris_14	C
Xcelris_141	Y
Xcelris_142	Y
Xcelris_143	T
Xcelris_14A	T
Xcelris_14B	T
Xcelris_174	C
Xcelris_175	C
Xcelris_176	C
Xcelris_1B	T
Xcelris_219	C
Xcelris_222	C
Xcelris_224	C
Xcelris_226	C
Xcelris_227	C
Xcelris_275	C
Xcelris_276	T
Xcelris_278	C
Xcelris_279	C
Xcelris_280	C
Xcelris_282	C
Xcelris_2B	T
Xcelris_332	C
Xcelris_333	C
Xcelris_335	Y
Xcelris_336	C
Xcelris_339	C
Xcelris_340	C
Xcelris_341	T
Xcelris_36	C
Xcelris_378	C
Xcelris_379	C
Xcelris_380	Y
Xcelris_381	C
Xcelris_382	Y
Xcelris_383	Y
Xcelris_385	C
Xcelris_392	C
Xcelris_394	C
Xcelris_44	C
Xcelris_5A	T
Xcelris_5B	C
Xcelris_67	T
Xcelris_6A	C
Xcelris_77	Y
Xcelris_84	Y
Xcelris_97	T
Xcelris_98	C
Xcelris_MT-134	C
Xcelris_MT-18	C
Xcelris_MT-46	T
Xcelris_MT-48	T
Xcelris_MT-6	T
Xcelris_MT-85	C
Xcelris_MT-99	C
Y1-f1_L5_I119	T
Y1-f2_L6_I121	T
Y1-f3_L7_I101	T
Y1-m1_L6_I120	T
Y1-m2_L4_I122	T
Y1-m3_L7_I123	T
Y1-m4_I124	Y
Y1-m5_L7_I102	T
YPt565	T
YPt601	T
YPt604	C
YPt609	Y
YPt610	T
YPt637	Y
YPt641	C
YPt648	T
You1	C
You3_L7_I1000005	T
Ypt566	Y
Ypt567	C
Ypt568	C
Ypt569	Y
Ypt570	C
Ypt571	T
Ypt572	Y
Ypt573	C
Ypt574	C
Ypt575	Y
Ypt576	T
Ypt577	C
Ypt578	T
Ypt579	Y
Ypt580	Y
Ypt581	T
Ypt582	Y
Ypt583	Y
Ypt584	T
Ypt585	Y
Ypt586	T
Ypt587	T
Ypt588	T
Ypt589	T
Ypt590	T
Ypt591	T
Ypt592	T
Ypt593	T
Ypt594	T
Ypt595	T
Ypt596	T
Ypt597	T
Ypt598	T
Ypt599	T
Ypt600	T
Ypt602	Y
Ypt603	C
Ypt606	Y
Ypt607	C
Ypt608	Y
Ypt622	Y
Ypt623	C
Ypt624	Y
Ypt626	C
Ypt638	Y
Ypt640	Y
Ypt643	C
Ypt645	T
Ypt646	Y
Ypt647	Y
Yt516	T
Yt517	C
Yt518	Y
Yt519	Y
Yt520	C
Yt521	Y
Yt522	C
Yt523	Y
Yt524	T
Yt525	C
Yt526	Y
Yt527	Y
Yt528	Y
Yt529	T
Yt530	T
Yt531	C
Yt536	Y
Yt538	T
Yt539	Y
Yt540	Y
ZJ1	T
ZJ2	T
ZJ3	T
ZJ4	T
india3	C
india49	Y
production	T
yp914ypt	T
ypt169_L3_I011	T
ypt170_L2_I012	T
ypt171_L2_I021	T
ypt173_L2_I022	Y
ypt175_L2_I023	T
ypt2041_L6_I002	C
ypt2051_L3_I003	Y
ypt2053_L6_I004	Y
ypt2063_L6_I005	T
ypt2069_L6_I006	Y
ypt2071_L1_I038	C
ypt2082	Y
ypt2086	Y
ypt2087	T
ypt2091	T
ypt2092	T
ypt2093	T
ypt2094	T
ypt2095	T
ypt2098	C
ypt2100	T
ypt2101	T
ypt2102	T
ypt2103	C
ypt2105	T
ypt2106	T
ypt2107	Y
ypt2108	Y
ypt2109	C
ypt2110	C
ypt2111	T
ypt2112	Y
ypt2114	T
ypt2115	Y
ypt2116	T
ypt2117	C
ypt2118	C
ypt2119	T
ypt2120	C
ypt2121	Y
ypt2122	C
ypt2124_L4_I052	T
ypt2126_L3_I053	T
ypt2127_L1_I036	Y
ypt2128_L6_I054	Y
ypt2144_L6_I055	C
ypt2145_L6_I056	Y
ypt2146_L6_I001	Y
ypt2163	C
ypt2164	C
ypt2165	Y
ypt2166	Y
ypt2167	Y
ypt2168	C
ypt2169	Y
ypt2170	Y
ypt2171	Y
ypt2172	C
ypt2173	C
ypt2174	Y
ypt2175	Y
ypt2176	C
ypt2177	C
ypt2178	Y
ypt217_L2_I024	Y
ypt2184	T
ypt2185	T
ypt2186	T
ypt2187	Y
ypt2189	T
ypt2190	Y
ypt2191	Y
ypt219_L3_I025	Y
ypt2200	Y
ypt2201	Y
ypt2205	Y
ypt2209	C
ypt220_L2_I026	T
ypt2214	Y
ypt2215	T
ypt2216	C
ypt2217	C
ypt2218	C
ypt2219	T
ypt221_L3_I042	T
ypt2220	T
ypt2221	T
ypt2222	T
ypt222_L3_I027	Y
ypt2437	C
ypt2438	T
ypt2439	Y
ypt2440	Y
ypt2441	C
ypt2442	C
ypt2443	T
ypt2444	T
ypt2445	Y
ypt2446	T
ypt2447	T
ypt2448	C
ypt2449	T
ypt2454	Y
ypt2459	Y
ypt2468	Y
ypt2496	T
ypt2497	Y
ypt2498	Y
ypt2499	T
ypt2500	T
ypt2503	T
ypt2504	Y
ypt2507	C
ypt2512	T
ypt2516	T
ypt2521	Y
ypt2523	Y
ypt2534	Y
ypt2541	Y
ypt2543	T
ypt2544	T
ypt2545	T
ypt2546	Y
ypt2547	T
ypt2552	T
ypt2562	T
ypt2563	Y
ypt2569	T
ypt2570	T
ypt2571	Y
ypt2572	Y
ypt2573	Y
ypt2574	T
ypt2575	C
ypt2579	C
ypt258_L3_I028	Y
ypt2598	C
ypt259_L2_I029	T
ypt2601	T
ypt2606	C
ypt2608	T
ypt2615	Y
ypt2622	T
ypt2623	T
ypt2624	T
ypt2625	T
ypt2627	Y
ypt2628	T
ypt2629	T
ypt262_L3_I030	T
ypt2630	T
ypt2636	T
ypt2638	T
ypt263_L3_I031	T
ypt2640	Y
ypt2641	Y
ypt2643	T
ypt2644	Y
ypt2646	T
ypt264_L3_I032	Y
ypt2650	C
ypt2653	Y
ypt2656	Y
ypt2657	C
ypt2658	Y
ypt2661	C
ypt2664	Y
ypt2665	Y
ypt2669	Y
ypt2670	T
ypt2671	T
ypt2672	T
ypt2673	T
ypt2678	Y
ypt2706	T
ypt2722	T
ypt2724	T
ypt2729	T
ypt2733	C
ypt2739	Y
ypt2740	T
ypt2745	T
ypt2746	T
ypt2760	C
ypt2761	T
ypt2765	T
ypt2766	T
ypt2775	Y
ypt2780	T
ypt2781	Y
ypt2782	C
ypt2783	Y
ypt2784	C
ypt2785	Y
ypt2786	T
ypt2787	Y
ypt2788	Y
ypt2789	Y
ypt2790	Y
ypt2791	C
ypt2792	C
ypt2799	Y
ypt2800	C
ypt2808	C
ypt2810	Y
ypt2812	T
ypt2813	C
ypt2814	C
ypt2815	C
ypt2816	C
ypt2819	C
ypt2821	C
ypt2822	Y
ypt2823	T
ypt2824	T
ypt2825	T
ypt2826	T
ypt2827	C
ypt2828	T
ypt2831	T
ypt2832	T
ypt2842	T
ypt2843	T
ypt2849	T
ypt2859	C
ypt2860	C
ypt2861	T
ypt2862	C
ypt2863	Y
ypt2870	Y
ypt2871	Y
ypt2887	C
ypt2888	T
ypt2889	C
ypt2890_L3_I040	C
ypt2891_L3_I041	Y
ypt2892	C
ypt2893_L3_I025	Y
ypt2894	C
ypt2895_L3_I026	Y
ypt2902	C
ypt2909	C
ypt2910	Y
ypt2911	T
ypt2912	T
ypt2918	Y
ypt2929	Y
ypt2930	T
ypt3001	T
ypt3002	C
ypt3003	T
ypt3004	C
ypt3005	T
ypt3006	T
ypt3007	C
ypt3008	T
ypt3009	Y
ypt3010	Y
ypt3012	Y
ypt3016	T
ypt3017	Y
ypt3028	Y
ypt3038	C
ypt3040	C
ypt3041	C
ypt3042	T
ypt3043	T
ypt3044	Y
ypt3045	C
ypt3046	T
ypt3047	T
ypt3050	T
ypt3051	Y
ypt3052	Y
ypt3061	T
ypt3069	T
ypt3072	C
ypt3133	C
ypt3134	T
ypt3135	C
ypt3136	C
ypt3137	Y
ypt3138	T
ypt3139	Y
ypt3140	C
ypt3141	C
ypt3142	T
ypt3143	C
ypt3145	Y
ypt3146	Y
ypt3149_L2_I034	T
ypt3150_L8_I023	C
ypt3159_L6_I035	T
ypt3160_L8_I024	Y
ypt3162_L6_I036	Y
ypt3179_L8_I025	Y
ypt3180	Y
ypt3181_L7_I038	Y
ypt3182_L1_I039	Y
ypt3189_L1_I040	C
ypt3190_L8_I026	C
ypt3191_L2_I041	C
ypt3193_L1_I027	Y
ypt3195_L1_I042	Y
ypt3196_L2_I043	C
ypt3197_L1_I044	T
ypt3204_L7_I046	C
ypt3205_L2_I047	C
ypt3207_L6_I050	C
ypt3210_L6_I051	T
ypt3211_L6_I052	C
ypt3212_L4_I028	C
ypt3219_L1_I030	T
ypt3220_L1_I031	T
ypt3221_L1_I032	C
ypt3228-7_L1_I034	T
ypt3229_L8_I045	C
ypt3239_L1_I035	C
ypt3240_L6_I054	Y
ypt3241_L6_I055	Y
ypt3243_L8_I047	T
ypt3246_L6_I050	T
ypt3247_L6_I051	T
ypt3257_L1_I056	C
ypt3258_L3_I001	C
ypt3259_L6_I002	C
ypt3261_L7_I004	T
ypt3262_L7_I005	C
ypt3270_L1_I007	C
ypt3271_L7_I008	C
ypt3272_L7_I010	C
ypt3274A_L7_I011	C
ypt3275_L1_I012	C
ypt3276_L7_I021	T
ypt3277_L6_I027	C
ypt3278_L3_I028	C
ypt3289_L8_I021	C
ypt4001	C
ypt50_L2_I030	T
ypt55_L1_I033	C
ypt890	C
ypt891	Y
ypt896_L2_I047	C
ypt897_L3_I048	C
ypt898	C
ypt899_L6_I051	T
ypt900_L2_I050	C
ypt902_L1_I053	C
ypt903_L2_I054	C
ypt904_L4_I055	Y
ypt905_L6_I056	C
ypt906_L3_I001	Y
ypt907_L6_I002	Y
ypt909_L5_I004	C
ypt910_L3_I005	C
ypt911_L6_I006	C
ypt912	C
ypt917	T
ypt918_L3_I007	C
ypt919_L4_I008	T
ypt920_L5_I010	C
ypt923_L2_I051	Y
ypt925_L2_I022	Y
ypt930	T
ypt931	C
ypt932	C
ypt933	C
ypt935	T
ypt936	T
ypt937	T
ypt938x	C
ypt940_L4_I026	C
ypt941_L5_I027	T
ypt942_L7_I028	T
ypt943	T
ypt944_L3_I030	T
ypt945_L4_I031	T
ypt946_L4_I032	T
ypt947_L5_I033	Y
ypt948_L2_I034	T
ypt949_L3_I035	T
ypt950_L5_I036	T
ypt951	C
ypt952	Y
ypt953	T
ypt954	Y
ypt955	C
ypt956x	T
ypt957	C
ypt958	T
ypt959	Y
ypt960	C
ypt961	C
ypt962	Y
ypt963	C
ypt964	T
ypt965	Y
ypt966	C
ypt971	C
ypt972x	Y
ypt973_L4_I037	T
ypt974	C
ypt975_L8_I039	T
ypt976_L7_I040	Y
ypt977_L2_I041	Y
ypt978_L2_I052	T
ypt979_L6_I042	Y
ypt980_L3_I043	Y
ypt981_L2_I044	T
ypt982_L4_I045	Y
ypt984	T
yptwj	T
147209	T
147830	T
GLF_denovo	T
Gallus_Sonneriatii_d	T
Ypt4000	T
Ypt4879	T
Ypt4880	T