ChickenSD

ChickenSD / Individual SNP / ggaS0041001466991

Detail information of ggaS0041001466991

1.General Information

SNP ID: ggaS0041001466991
Organism: Gallus gallus
Individual: 15S_L6_I022

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: T

3.Reference Map information

Chrom Position Reference 15S_L6_I022
chr16 6581 A T

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0041001466991 ENSGALG00000019831 LTB4R2 downstream_gene_variant => =>
ggaS0041001466991 ENSGALG00000027865 CD1.2 intron_variant => =>
ggaS0041001466991 ENSGALG00000012494 CD1A1 downstream_gene_variant => =>
ggaS0041001466991 ENSGALG00000012494 CD1A1 downstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S W
101S_L1_I028 T
102S_L3_I037 T
103S A
104S_L7_I029 A
105S_L3_I039 A
106S_L6_I030 W
107S_L2_I031 A
108S_L6_I032 A
109S_L5_I033 A
10S_L1_I052 A
110S_L4_I034 A
111S_L3_I047 A
112S_L3_I035 A
113S_L1_I036 W
114S_L3_I037 A
116S_L6_I038 A
117S_L2_I039 A
118S_L4_I040 A
119S_L3_I041 A
11S A
120S_L1_I041 A
121S_L3_I042 A
122S_L4_I043 A
123S_L4_I044 W
125S_L3_I050 T
126S_L3_I051 A
127S_L2_I045 A
128S_L1_I042 T
129S_L3_I043 W
12S_L4_I011 A
130S_L4_I044 W
131S_L2_I045 T
132S_L2_I046 W
133S_L8_I046 W
134S_L2_I047 A
135S_L3_I048 A
13S_L7_I012 T
14S_L2_I021 A
16S_L5_I023 W
17S_L3_I024 A
18833 T
18S_L7_I025 W
19297 A
19912 W
19S_L4_I026 W
1S W
20736 A
20S_L7_I027 A
21S_L6_I028 A
22S_L6_I029 A
23S_L2_I030 W
24S_L4_I031 T
25S_L3_I032 A
26S T
27S_L4_I034 A
28S_L4_I035 W
29S_L3_I036 T
2S A
30S_L2_I037 W
31S_L3_I038 A
32S_L1_I039 W
33S W
35S_L5_I041 A
36S_L5_I042 A
37S_L2_I043 A
38S_L6_I044 W
39S_L6_I053 A
3S_L4_I003 A
40S_L2_I054 A
41S_L5_I045 A
42S_L3_I055 A
43S T
44S_L4_I001 W
45S_L2_I002 A
46S_L4_I003 W
47S_L3_I046 A
48S_L1_I004 A
49S_L1_I005 A
4S_L4_I004 A
50S_L1_I047 A
51S_L6_I048 A
52S_L2_I050 A
53S_L2_I006 W
54S_L2_I007 W
55S_L1_I008 W
56S_L1_I010 W
57S_L3_I046 T
58S_L4_I051 T
59S_L5_I052 T
5S A
60S_L5_I053 W
61S_L8_I054 A
62S_L8_I055 A
63S_L5_I056 W
64S_L4_I001 A
65S_L5_I002 A
66S_L2_I003 A
67S_L1_I011 W
68S_L3_I012 A
69S W
6S A
70S A
71S_L3_I023 A
72S_L1_I024 A
73S_L1_I025 A
74S_L4_I026 A
75S_L3_I027 A
76S_L1_I028 A
77S_L4_I029 W
78S_L4_I030 A
79S_L2_I031 T
7S_L4_I007 W
80S_L3_I004 A
81S_L1_I005 A
82S A
83S_L3_I033 W
84S_L5_I006 A
85S_L5_I007 A
86S_L5_I008 A
87S_L5_I010 A
88S_L4_I011 A
89S_L6_I012 A
90S_L4_I021 A
92S_L5_I023 A
93S_L7_I024 A
95S_L8_I025 A
96S_L4_I026 T
97S_L8_I027 T
98S_L3_I034 T
99S_L2_I035 T
9S A
A1 A
A10 W
A12 A
A14 A
A3 W
A8 A
BKL2 A
BLB2_L2_I008 A
BLO1 A
BLO11 A
BLO15 A
BLO2 A
BLO3_L4_I022 A
BOJA2 A
BYW3_L3_I033 A
BYW5_L2_I010 A
GVF A
India1 A
India11 W
India13 A
India15 W
India17 A
India19 A
India21 A
India23 T
India25 A
India27 A
India29 W
India31 A
India33 W
India35 A
India37 A
India41 A
India43 W
India45 A
India47 A
India5 W
India51 A
India57 W
India59 W
India61 W
India7 W
India9 A
L2 A
N1 A
N11 W
N13 W
N18 W
N3 A
N5 A
N7 T
N8 W
S-f1_L4_I106 W
S-f2_I107 W
S-f3_I108 T
S-f4_L4_I109 T
S-m1_I101 A
S-m2_I102 A
S-m3_I103 T
S-m4_L2_I104 A
S-m5_I105 A
S6 W
SAMN02486156 T
SAMN02486157 A
SAMN02486158 A
SAMN02486159 A
SAMN02486160 A
SAMN02486161 A
SAMN02486162 A
SAMN02486163 A
SAMN02486164 A
SAMN02486165 W
SAMN02486166 A
SAMN02486167 W
Silkia W
T2 W
T3 W
T5 A
TD1 W
TD12 W
TD15 A
TD22 A
TD27 A
TD30 A
TD6 A
TD9 A
Tibet T
Xcelris_101 A
Xcelris_104 A
Xcelris_105 A
Xcelris_10A A
Xcelris_112 A
Xcelris_113 A
Xcelris_11B T
Xcelris_12 A
Xcelris_120 A
Xcelris_127 W
Xcelris_128 A
Xcelris_129 A
Xcelris_141 A
Xcelris_143 A
Xcelris_14A T
Xcelris_174 A
Xcelris_1B T
Xcelris_219 A
Xcelris_221 A
Xcelris_222 A
Xcelris_224 A
Xcelris_226 A
Xcelris_227 A
Xcelris_275 A
Xcelris_276 A
Xcelris_278 A
Xcelris_2A T
Xcelris_2B T
Xcelris_3 A
Xcelris_331 A
Xcelris_332 A
Xcelris_333 A
Xcelris_335 A
Xcelris_336 A
Xcelris_340 A
Xcelris_341 A
Xcelris_36 A
Xcelris_377 A
Xcelris_378 A
Xcelris_379 A
Xcelris_380 A
Xcelris_381 A
Xcelris_383 A
Xcelris_384 A
Xcelris_385 A
Xcelris_4A A
Xcelris_4B A
Xcelris_5B A
Xcelris_67 A
Xcelris_6A A
Xcelris_7 A
Xcelris_77 A
Xcelris_8 A
Xcelris_84 A
Xcelris_90 W
Xcelris_98 A
Xcelris_MT-134 A
Xcelris_MT-18 A
Xcelris_MT-6 A
Xcelris_MT-9 A
Xcelris_MT-99 A
Y1-f1_L5_I119 W
Y1-f2_L6_I121 T
Y1-f3_L7_I101 A
Y1-m1_L6_I120 T
Y1-m2_L4_I122 T
Y1-m3_L7_I123 T
Y1-m4_I124 W
Y1-m5_L7_I102 T
YPt565 W
YPt601 T
YPt604 A
YPt609 W
YPt610 W
YPt637 A
YPt641 A
YPt648 W
You1 A
You3_L7_I1000005 W
Ypt567 A
Ypt568 A
Ypt569 W
Ypt570 A
Ypt571 T
Ypt572 W
Ypt573 A
Ypt574 A
Ypt575 W
Ypt576 A
Ypt577 A
Ypt578 T
Ypt579 T
Ypt580 W
Ypt581 T
Ypt582 W
Ypt583 W
Ypt584 T
Ypt585 W
Ypt586 T
Ypt587 T
Ypt588 T
Ypt589 T
Ypt590 T
Ypt591 T
Ypt592 T
Ypt593 T
Ypt594 T
Ypt595 T
Ypt596 T
Ypt597 T
Ypt598 T
Ypt599 T
Ypt600 T
Ypt602 T
Ypt603 A
Ypt606 A
Ypt607 A
Ypt608 W
Ypt622 W
Ypt623 W
Ypt624 A
Ypt626 A
Ypt638 A
Ypt640 A
Ypt643 A
Ypt645 A
Ypt646 A
Yt516 A
Yt517 A
Yt518 W
Yt519 A
Yt520 A
Yt521 A
Yt522 A
Yt523 W
Yt524 W
Yt525 A
Yt526 W
Yt527 A
Yt528 W
Yt529 A
Yt530 A
Yt531 A
Yt536 A
Yt538 T
Yt539 A
Yt540 W
ZJ1 T
ZJ2 T
ZJ3 A
ZJ4 A
india3 A
india49 W
production W
yp914ypt A
ypt169_L3_I011 A
ypt170_L2_I012 A
ypt171_L2_I021 W
ypt173_L2_I022 W
ypt175_L2_I023 A
ypt2041_L6_I002 A
ypt2043_L1_I037 A
ypt2051_L3_I003 A
ypt2053_L6_I004 A
ypt2063_L6_I005 T
ypt2069_L6_I006 A
ypt2071_L1_I038 A
ypt2082 W
ypt2086 W
ypt2091 W
ypt2092 W
ypt2093 T
ypt2094 T
ypt2095 T
ypt2098 A
ypt2100 A
ypt2101 W
ypt2102 W
ypt2103 A
ypt2105 W
ypt2106 A
ypt2107 W
ypt2108 A
ypt2109 A
ypt2110 A
ypt2111 W
ypt2112 A
ypt2114 W
ypt2115 W
ypt2116 T
ypt2117 A
ypt2118 A
ypt2119 A
ypt2120 W
ypt2121 W
ypt2122 A
ypt2124_L4_I052 W
ypt2126_L3_I053 A
ypt2127_L1_I036 A
ypt2128_L6_I054 A
ypt2144_L6_I055 A
ypt2145_L6_I056 A
ypt2146_L6_I001 W
ypt2163 A
ypt2164 A
ypt2165 W
ypt2166 A
ypt2167 W
ypt2168 A
ypt2169 W
ypt2170 T
ypt2171 A
ypt2172 A
ypt2173 W
ypt2174 A
ypt2175 W
ypt2176 A
ypt2177 A
ypt2178 W
ypt217_L2_I024 T
ypt2185 A
ypt2186 W
ypt2187 W
ypt2189 T
ypt2190 W
ypt2191 T
ypt219_L3_I025 A
ypt2200 A
ypt2201 W
ypt2205 A
ypt2209 A
ypt220_L2_I026 W
ypt2214 W
ypt2215 A
ypt2216 A
ypt2217 A
ypt2218 W
ypt2219 W
ypt221_L3_I042 W
ypt2220 T
ypt2221 T
ypt2222 A
ypt222_L3_I027 A
ypt2437 A
ypt2438 W
ypt2439 A
ypt2440 A
ypt2441 A
ypt2442 A
ypt2443 A
ypt2444 A
ypt2445 A
ypt2446 W
ypt2447 A
ypt2448 A
ypt2449 A
ypt2454 A
ypt2459 A
ypt2468 A
ypt2496 A
ypt2497 A
ypt2498 A
ypt2499 W
ypt2503 T
ypt2504 A
ypt2507 A
ypt2512 T
ypt2516 W
ypt2521 A
ypt2523 W
ypt2534 T
ypt2541 W
ypt2543 W
ypt2544 A
ypt2545 A
ypt2546 T
ypt2547 A
ypt2552 T
ypt2562 W
ypt2563 A
ypt2569 T
ypt2570 W
ypt2571 A
ypt2572 W
ypt2573 W
ypt2574 W
ypt2575 A
ypt2579 A
ypt258_L3_I028 A
ypt2598 A
ypt259_L2_I029 W
ypt2601 T
ypt2606 A
ypt2608 T
ypt2615 A
ypt2622 W
ypt2623 T
ypt2624 A
ypt2625 W
ypt2627 A
ypt2628 W
ypt2629 W
ypt262_L3_I030 A
ypt2630 A
ypt2636 A
ypt2638 W
ypt263_L3_I031 A
ypt2640 A
ypt2641 A
ypt2643 A
ypt2644 A
ypt2646 T
ypt264_L3_I032 W
ypt2650 A
ypt2653 W
ypt2656 A
ypt2657 A
ypt2658 A
ypt2661 A
ypt2664 A
ypt2665 A
ypt2669 A
ypt2670 W
ypt2671 W
ypt2672 W
ypt2673 W
ypt2678 T
ypt2706 T
ypt2722 T
ypt2724 A
ypt2729 W
ypt2733 A
ypt2739 A
ypt2740 W
ypt2745 A
ypt2746 A
ypt2760 A
ypt2761 W
ypt2765 A
ypt2766 W
ypt2775 A
ypt2780 A
ypt2781 A
ypt2782 A
ypt2783 A
ypt2784 A
ypt2785 A
ypt2786 A
ypt2787 W
ypt2788 A
ypt2789 T
ypt2790 W
ypt2791 A
ypt2792 A
ypt2799 A
ypt2800 W
ypt2808 A
ypt2810 A
ypt2812 A
ypt2813 A
ypt2814 A
ypt2815 A
ypt2816 A
ypt2819 A
ypt2821 A
ypt2822 A
ypt2823 T
ypt2824 T
ypt2825 T
ypt2826 T
ypt2827 A
ypt2828 A
ypt2831 W
ypt2832 A
ypt2842 A
ypt2843 W
ypt2849 A
ypt2859 A
ypt2861 A
ypt2862 A
ypt2863 A
ypt2870 A
ypt2871 A
ypt2887 A
ypt2888 A
ypt2889 A
ypt2890_L3_I040 A
ypt2891_L3_I041 A
ypt2892 A
ypt2893_L3_I025 W
ypt2894 A
ypt2895_L3_I026 W
ypt2902 A
ypt2909 A
ypt2910 A
ypt2911 T
ypt2912 A
ypt2918 A
ypt2929 W
ypt2930 A
ypt3001 W
ypt3002 A
ypt3003 A
ypt3005 A
ypt3006 W
ypt3007 A
ypt3008 A
ypt3009 W
ypt3010 A
ypt3012 W
ypt3016 W
ypt3017 W
ypt3028 W
ypt3038 A
ypt3040 A
ypt3041 A
ypt3042 W
ypt3043 W
ypt3044 W
ypt3045 A
ypt3046 A
ypt3047 T
ypt3050 W
ypt3051 W
ypt3052 W
ypt3061 T
ypt3069 T
ypt3072 A
ypt3133 A
ypt3134 T
ypt3135 A
ypt3136 A
ypt3137 W
ypt3138 T
ypt3139 A
ypt3140 A
ypt3141 A
ypt3142 A
ypt3143 A
ypt3144_L3_I039 A
ypt3145 A
ypt3146 A
ypt3149_L2_I034 W
ypt3150_L8_I023 A
ypt3159_L6_I035 W
ypt3160_L8_I024 W
ypt3162_L6_I036 W
ypt3179_L8_I025 W
ypt3180 A
ypt3181_L7_I038 W
ypt3182_L1_I039 W
ypt3189_L1_I040 A
ypt3190_L8_I026 A
ypt3191_L2_I041 A
ypt3193_L1_I027 A
ypt3195_L1_I042 A
ypt3196_L2_I043 A
ypt3197_L1_I044 T
ypt3204_L7_I046 A
ypt3205_L2_I047 A
ypt3206_L1_I048 A
ypt3207_L6_I050 A
ypt3211_L6_I052 A
ypt3212_L4_I028 A
ypt3219_L1_I030 T
ypt3220_L1_I031 A
ypt3221_L1_I032 A
ypt3222_L1_I033 W
ypt3224_L8_I043 A
ypt3225_L2_I053 A
ypt3240_L6_I054 A
ypt3243_L8_I047 A
ypt3246_L6_I050 T
ypt3257_L1_I056 A
ypt3261_L7_I004 T
ypt3262_L7_I005 A
ypt3269_L7_I006 A
ypt3270_L1_I007 A
ypt3271_L7_I008 A
ypt3272_L7_I010 A
ypt3274A_L7_I011 A
ypt3275_L1_I012 A
ypt3276_L7_I021 A
ypt3277_L6_I027 A
ypt47_L2_I029 T
ypt50_L2_I030 T
ypt51_L2_I031 A
ypt53_L2_I032 A
ypt55_L1_I033 A
ypt890 A
ypt891 A
ypt896_L2_I047 A
ypt898 A
ypt899_L6_I051 A
ypt900_L2_I050 A
ypt901_L1_I052 A
ypt902_L1_I053 A
ypt903_L2_I054 A
ypt904_L4_I055 A
ypt905_L6_I056 A
ypt907_L6_I002 A
ypt908_L1_I003 A
ypt909_L5_I004 A
ypt913 A
ypt915 A
ypt918_L3_I007 A
ypt919_L4_I008 A
ypt920_L5_I010 A
ypt922_L4_I012 A
ypt923_L2_I051 A
ypt924_L3_I021 A
ypt925_L2_I022 A
ypt929 W
ypt931 A
ypt932 A
ypt933 A
ypt937 A
ypt939_L5_I025 A
ypt940_L4_I026 A
ypt941_L5_I027 W
ypt942_L7_I028 T
ypt943 A
ypt944_L3_I030 T
ypt945_L4_I031 T
ypt946_L4_I032 T
ypt947_L5_I033 W
ypt948_L2_I034 T
ypt949_L3_I035 W
ypt950_L5_I036 T
ypt951 A
ypt952 W
ypt953 W
ypt954 A
ypt955 A
ypt956x W
ypt957 A
ypt958 W
ypt960 A
ypt961 A
ypt962 W
ypt963 A
ypt964 T
ypt965 W
ypt966 A
ypt971 A
ypt972x W
ypt973_L4_I037 A
ypt974 A
ypt975_L8_I039 T
ypt976_L7_I040 T
ypt977_L2_I041 W
ypt978_L2_I052 T
ypt979_L6_I042 W
ypt980_L3_I043 W
ypt981_L2_I044 T
ypt982_L4_I045 W
ypt984 T
yptwj T
147209 T
147830 T
GLF_denovo T
Gallus_Sonneriatii_d T
Ypt4000 T
Ypt4879 T
Ypt4880 T