ChickenSD

ChickenSD / Individual SNP / ggaS0040001561835

Detail information of ggaS0040001561835

1.General Information

SNP ID: ggaS0040001561835
Organism: Gallus gallus
Individual: 14S_L2_I021

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 14S_L2_I021
chr19 956 A C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0040001561835 - intergenic_variant => =>

5.Individual Genotype

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Individual Genotype
100S M
101S_L1_I028 C
102S_L3_I037 M
103S A
104S_L7_I029 M
105S_L3_I039 M
106S_L6_I030 A
107S_L2_I031 M
108S_L6_I032 M
109S_L5_I033 A
10S_L1_I052 A
110S_L4_I034 M
111S_L3_I047 A
112S_L3_I035 A
113S_L1_I036 A
114S_L3_I037 A
116S_L6_I038 A
117S_L2_I039 C
118S_L4_I040 A
119S_L3_I041 A
11S M
120S_L1_I041 A
121S_L3_I042 M
122S_L4_I043 M
123S_L4_I044 A
124S_L2_I048 M
125S_L3_I050 M
126S_L3_I051 C
127S_L2_I045 A
128S_L1_I042 A
129S_L3_I043 A
12S_L4_I011 C
130S_L4_I044 A
131S_L2_I045 M
132S_L2_I046 M
133S_L8_I046 A
134S_L2_I047 M
135S_L3_I048 A
13S_L7_I012 A
15S_L6_I022 A
16S_L5_I023 A
17S_L3_I024 C
18833 M
18S_L7_I025 M
19297 M
19912 M
19S_L4_I026 M
1S A
20736 M
20S_L7_I027 C
21S_L6_I028 A
22S_L6_I029 C
23S_L2_I030 A
24S_L4_I031 M
25S_L3_I032 A
26S A
27S_L4_I034 A
28S_L4_I035 A
29S_L3_I036 A
2S A
30S_L2_I037 M
31S_L3_I038 A
32S_L1_I039 A
33S M
35S_L5_I041 A
36S_L5_I042 M
37S_L2_I043 M
38S_L6_I044 A
39S_L6_I053 M
3S_L4_I003 A
40S_L2_I054 M
41S_L5_I045 M
42S_L3_I055 M
43S M
44S_L4_I001 A
45S_L2_I002 M
46S_L4_I003 M
47S_L3_I046 M
48S_L1_I004 A
49S_L1_I005 A
4S_L4_I004 M
50S_L1_I047 C
51S_L6_I048 M
52S_L2_I050 A
53S_L2_I006 M
54S_L2_I007 A
55S_L1_I008 M
56S_L1_I010 C
57S_L3_I046 C
58S_L4_I051 M
59S_L5_I052 M
5S A
60S_L5_I053 C
61S_L8_I054 M
62S_L8_I055 C
63S_L5_I056 M
64S_L4_I001 A
65S_L5_I002 M
66S_L2_I003 A
67S_L1_I011 C
68S_L3_I012 C
69S M
6S M
70S M
71S_L3_I023 A
72S_L1_I024 C
73S_L1_I025 A
74S_L4_I026 M
75S_L3_I027 M
76S_L1_I028 M
77S_L4_I029 A
78S_L4_I030 M
79S_L2_I031 A
7S_L4_I007 M
80S_L3_I004 M
81S_L1_I005 C
82S C
83S_L3_I033 M
84S_L5_I006 M
85S_L5_I007 A
86S_L5_I008 M
87S_L5_I010 M
88S_L4_I011 M
89S_L6_I012 A
90S_L4_I021 A
91S_L4_I022 M
92S_L5_I023 A
93S_L7_I024 A
95S_L8_I025 A
96S_L4_I026 M
97S_L8_I027 C
98S_L3_I034 M
99S_L2_I035 A
9S M
A1 A
A10 A
A12 M
A14 M
A3 C
A8 M
BKL2 C
BLB1_L2_I007 A
BLO1 A
BLO11 A
BLO15 A
BLO2 A
BLO3_L4_I022 A
BOJA2 A
BYW3_L3_I033 A
GVF A
India1 M
India11 A
India13 C
India15 A
India17 A
India21 A
India23 M
India25 C
India27 C
India29 A
India31 A
India33 A
India35 C
India37 C
India39 M
India41 M
India43 A
India45 A
India47 C
India5 C
India51 M
India57 M
India59 M
India61 M
India7 A
India9 A
L2 M
N1 C
N11 A
N13 A
N18 M
N3 C
N7 A
N8 M
S-f1_L4_I106 M
S-f2_I107 M
S-f3_I108 C
S-f4_L4_I109 C
S-m1_I101 A
S-m2_I102 C
S-m3_I103 M
S-m4_L2_I104 C
S-m5_I105 C
S6 C
SAMN02486156 C
SAMN02486157 M
SAMN02486158 M
SAMN02486159 A
SAMN02486160 M
SAMN02486161 C
SAMN02486163 M
SAMN02486164 A
SAMN02486165 M
SAMN02486166 A
SAMN02486167 A
Silkia M
T2 A
T3 M
T5 M
TD1 C
TD12 C
TD15 A
TD22 C
TD27 C
TD30 M
TD6 A
TD9 A
Tibet C
Xcelris_101 A
Xcelris_104 C
Xcelris_105 C
Xcelris_10A A
Xcelris_10B M
Xcelris_112 A
Xcelris_113 A
Xcelris_114 A
Xcelris_12 A
Xcelris_120 A
Xcelris_127 A
Xcelris_128 A
Xcelris_129 A
Xcelris_12A M
Xcelris_13B A
Xcelris_14 A
Xcelris_141 A
Xcelris_143 A
Xcelris_144 A
Xcelris_14A M
Xcelris_14B M
Xcelris_175 A
Xcelris_176 M
Xcelris_1B C
Xcelris_219 A
Xcelris_221 A
Xcelris_224 A
Xcelris_226 A
Xcelris_227 A
Xcelris_275 A
Xcelris_276 A
Xcelris_278 A
Xcelris_279 A
Xcelris_280 A
Xcelris_2B C
Xcelris_3 A
Xcelris_331 A
Xcelris_332 A
Xcelris_335 A
Xcelris_339 A
Xcelris_340 A
Xcelris_341 A
Xcelris_36 A
Xcelris_377 A
Xcelris_378 A
Xcelris_379 A
Xcelris_380 A
Xcelris_381 A
Xcelris_382 A
Xcelris_383 A
Xcelris_384 A
Xcelris_385 A
Xcelris_392 A
Xcelris_44 A
Xcelris_4A A
Xcelris_4B A
Xcelris_5A A
Xcelris_5B A
Xcelris_67 A
Xcelris_6A A
Xcelris_6B M
Xcelris_7 A
Xcelris_77 A
Xcelris_8 A
Xcelris_84 A
Xcelris_8A M
Xcelris_8B A
Xcelris_90 A
Xcelris_97 A
Xcelris_98 A
Xcelris_MT-134 A
Xcelris_MT-18 A
Xcelris_MT-46 A
Xcelris_MT-48 A
Xcelris_MT-6 A
Xcelris_MT-99 A
Y1-f1_L5_I119 M
Y1-f2_L6_I121 A
Y1-f3_L7_I101 M
Y1-m1_L6_I120 M
Y1-m2_L4_I122 A
Y1-m3_L7_I123 A
Y1-m4_I124 M
Y1-m5_L7_I102 C
YPt565 C
YPt601 C
YPt604 C
YPt609 A
YPt610 A
YPt637 C
YPt641 M
YPt648 C
You1 C
You3_L7_I1000005 C
Ypt566 C
Ypt567 M
Ypt568 C
Ypt569 C
Ypt570 C
Ypt571 C
Ypt572 C
Ypt573 M
Ypt574 M
Ypt575 M
Ypt576 M
Ypt577 A
Ypt578 C
Ypt579 A
Ypt580 C
Ypt581 C
Ypt582 M
Ypt583 C
Ypt584 C
Ypt585 M
Ypt586 M
Ypt587 C
Ypt588 M
Ypt589 M
Ypt590 C
Ypt591 C
Ypt592 C
Ypt593 C
Ypt594 C
Ypt595 C
Ypt596 C
Ypt597 C
Ypt598 C
Ypt599 M
Ypt600 C
Ypt602 A
Ypt606 M
Ypt607 M
Ypt608 A
Ypt622 C
Ypt623 M
Ypt624 C
Ypt626 C
Ypt638 C
Ypt640 C
Ypt642 M
Ypt643 M
Ypt645 A
Ypt646 A
Ypt647 A
Yt516 M
Yt517 M
Yt518 A
Yt519 M
Yt520 C
Yt521 M
Yt522 C
Yt523 M
Yt524 M
Yt525 C
Yt526 A
Yt527 M
Yt528 M
Yt529 M
Yt530 A
Yt531 C
Yt536 A
Yt538 A
Yt539 M
Yt540 A
ZJ1 M
ZJ2 A
ZJ3 M
ZJ4 M
india3 M
india49 C
production A
yp914ypt C
ypt169_L3_I011 M
ypt170_L2_I012 M
ypt171_L2_I021 M
ypt173_L2_I022 M
ypt175_L2_I023 M
ypt2041_L6_I002 C
ypt2043_L1_I037 C
ypt2051_L3_I003 C
ypt2053_L6_I004 A
ypt2063_L6_I005 C
ypt2069_L6_I006 A
ypt2071_L1_I038 C
ypt2082 M
ypt2086 A
ypt2087 M
ypt2091 C
ypt2092 C
ypt2093 A
ypt2094 M
ypt2095 M
ypt2098 A
ypt2100 A
ypt2101 A
ypt2102 A
ypt2103 A
ypt2105 M
ypt2106 C
ypt2107 A
ypt2108 M
ypt2109 A
ypt2110 A
ypt2111 M
ypt2112 A
ypt2114 M
ypt2115 A
ypt2116 A
ypt2117 A
ypt2118 A
ypt2119 C
ypt2120 A
ypt2121 M
ypt2122 A
ypt2124_L4_I052 C
ypt2126_L3_I053 M
ypt2127_L1_I036 A
ypt2128_L6_I054 A
ypt2144_L6_I055 A
ypt2145_L6_I056 A
ypt2146_L6_I001 M
ypt2163 A
ypt2164 M
ypt2165 A
ypt2166 C
ypt2167 M
ypt2168 M
ypt2169 A
ypt2170 M
ypt2171 A
ypt2172 A
ypt2173 A
ypt2174 C
ypt2175 M
ypt2176 M
ypt2177 M
ypt2178 C
ypt217_L2_I024 M
ypt2184 C
ypt2185 A
ypt2186 C
ypt2187 C
ypt2189 C
ypt2190 A
ypt2191 C
ypt219_L3_I025 A
ypt2200 A
ypt2201 M
ypt2205 C
ypt2209 M
ypt220_L2_I026 C
ypt2214 M
ypt2215 M
ypt2216 A
ypt2217 M
ypt2219 C
ypt221_L3_I042 M
ypt2220 C
ypt2221 M
ypt2222 A
ypt222_L3_I027 M
ypt2437 M
ypt2438 A
ypt2439 M
ypt2440 M
ypt2441 A
ypt2442 A
ypt2443 M
ypt2444 A
ypt2445 A
ypt2446 A
ypt2447 A
ypt2448 A
ypt2449 C
ypt2454 A
ypt2459 A
ypt2468 M
ypt2496 A
ypt2497 M
ypt2498 M
ypt2499 A
ypt2500 M
ypt2503 M
ypt2504 C
ypt2507 A
ypt2512 A
ypt2516 A
ypt2521 C
ypt2523 A
ypt2534 M
ypt2541 M
ypt2543 A
ypt2544 M
ypt2545 A
ypt2546 A
ypt2547 C
ypt2552 A
ypt2562 A
ypt2563 C
ypt2569 M
ypt2570 M
ypt2571 M
ypt2572 M
ypt2573 M
ypt2574 A
ypt2575 M
ypt2579 C
ypt258_L3_I028 A
ypt2598 C
ypt259_L2_I029 A
ypt2601 M
ypt2606 A
ypt2608 A
ypt2615 A
ypt2622 A
ypt2623 A
ypt2624 A
ypt2625 M
ypt2627 A
ypt2628 A
ypt2629 M
ypt262_L3_I030 A
ypt2630 M
ypt2636 M
ypt2638 A
ypt263_L3_I031 M
ypt2640 A
ypt2641 M
ypt2643 M
ypt2644 M
ypt2646 M
ypt264_L3_I032 A
ypt2650 M
ypt2653 M
ypt2656 M
ypt2657 A
ypt2658 A
ypt2661 M
ypt2664 C
ypt2665 M
ypt2669 A
ypt2670 M
ypt2671 A
ypt2672 M
ypt2673 C
ypt2678 C
ypt2706 M
ypt2722 M
ypt2724 A
ypt2729 C
ypt2733 M
ypt2739 C
ypt2740 M
ypt2745 A
ypt2746 M
ypt2760 A
ypt2761 C
ypt2765 C
ypt2766 M
ypt2775 M
ypt2780 M
ypt2781 A
ypt2782 C
ypt2783 A
ypt2784 M
ypt2785 M
ypt2786 M
ypt2787 A
ypt2788 M
ypt2789 A
ypt2790 M
ypt2791 M
ypt2792 C
ypt2799 C
ypt2800 M
ypt2808 M
ypt2810 A
ypt2812 M
ypt2813 M
ypt2814 M
ypt2815 A
ypt2816 A
ypt2817 M
ypt2819 A
ypt2821 A
ypt2822 A
ypt2823 M
ypt2824 C
ypt2825 M
ypt2826 A
ypt2827 M
ypt2828 A
ypt2831 A
ypt2832 M
ypt2842 M
ypt2843 C
ypt2849 M
ypt2859 C
ypt2860 A
ypt2862 A
ypt2863 A
ypt2870 A
ypt2871 A
ypt2887 A
ypt2888 A
ypt2889 A
ypt2891_L3_I041 A
ypt2892 M
ypt2893_L3_I025 A
ypt2894 C
ypt2895_L3_I026 A
ypt2902 A
ypt2910 A
ypt2911 M
ypt2912 C
ypt2918 C
ypt2929 A
ypt2930 A
ypt3001 A
ypt3002 C
ypt3003 C
ypt3004 M
ypt3005 M
ypt3006 A
ypt3007 A
ypt3008 C
ypt3009 C
ypt3010 M
ypt3012 M
ypt3016 M
ypt3017 M
ypt3028 A
ypt3038 A
ypt3040 M
ypt3041 C
ypt3042 A
ypt3043 A
ypt3044 M
ypt3045 C
ypt3047 A
ypt3050 M
ypt3051 M
ypt3052 M
ypt3061 C
ypt3069 C
ypt3072 A
ypt3133 C
ypt3134 M
ypt3135 C
ypt3136 C
ypt3137 C
ypt3138 C
ypt3139 M
ypt3140 M
ypt3141 A
ypt3142 M
ypt3143 C
ypt3145 M
ypt3146 A
ypt3149_L2_I034 M
ypt3150_L8_I023 A
ypt3159_L6_I035 A
ypt3160_L8_I024 M
ypt3162_L6_I036 A
ypt3179_L8_I025 M
ypt3180 M
ypt3181_L7_I038 C
ypt3182_L1_I039 C
ypt3189_L1_I040 A
ypt3190_L8_I026 C
ypt3191_L2_I041 C
ypt3193_L1_I027 M
ypt3195_L1_I042 A
ypt3196_L2_I043 A
ypt3197_L1_I044 C
ypt3204_L7_I046 A
ypt3205_L2_I047 C
ypt3206_L1_I048 C
ypt3207_L6_I050 A
ypt3210_L6_I051 M
ypt3211_L6_I052 A
ypt3212_L4_I028 A
ypt3213_L8_I029 A
ypt3220_L1_I031 A
ypt3221_L1_I032 A
ypt3222_L1_I033 A
ypt3224_L8_I043 A
ypt3225_L2_I053 A
ypt3226_L3_I044 M
ypt3238_L3_I046 A
ypt3239_L1_I035 A
ypt3240_L6_I054 A
ypt3243_L8_I047 A
ypt3245 A
ypt3246_L6_I050 M
ypt3247_L6_I051 M
ypt3258_L3_I001 A
ypt3259_L6_I002 M
ypt3261_L7_I004 C
ypt3262_L7_I005 A
ypt3269_L7_I006 A
ypt3271_L7_I008 A
ypt3272_L7_I010 A
ypt3274A_L7_I011 A
ypt3275_L1_I012 A
ypt3276_L7_I021 A
ypt3277_L6_I027 A
ypt3278_L3_I028 A
ypt3289_L8_I021 A
ypt50_L2_I030 C
ypt51_L2_I031 A
ypt53_L2_I032 A
ypt55_L1_I033 A
ypt891 A
ypt897_L3_I048 A
ypt898 A
ypt899_L6_I051 A
ypt900_L2_I050 A
ypt901_L1_I052 A
ypt902_L1_I053 A
ypt903_L2_I054 A
ypt904_L4_I055 A
ypt905_L6_I056 A
ypt906_L3_I001 A
ypt907_L6_I002 A
ypt908_L1_I003 A
ypt909_L5_I004 A
ypt910_L3_I005 A
ypt912 A
ypt913 A
ypt915 A
ypt917 A
ypt918_L3_I007 A
ypt919_L4_I008 A
ypt920_L5_I010 A
ypt921_L8_I011 M
ypt922_L4_I012 A
ypt923_L2_I051 A
ypt924_L3_I021 A
ypt925_L2_I022 A
ypt926_L2_I023 M
ypt928 A
ypt929 A
ypt930 A
ypt931 A
ypt932 A
ypt933 A
ypt935 A
ypt936 A
ypt937 A
ypt940_L4_I026 A
ypt941_L5_I027 M
ypt942_L7_I028 A
ypt943 M
ypt944_L3_I030 M
ypt945_L4_I031 A
ypt946_L4_I032 A
ypt947_L5_I033 M
ypt948_L2_I034 C
ypt949_L3_I035 C
ypt950_L5_I036 C
ypt951 C
ypt952 A
ypt953 A
ypt954 C
ypt955 M
ypt956x C
ypt957 C
ypt958 C
ypt959 C
ypt960 M
ypt961 C
ypt962 C
ypt963 C
ypt964 C
ypt965 C
ypt966 M
ypt971 M
ypt972x M
ypt973_L4_I037 M
ypt974 A
ypt975_L8_I039 C
ypt976_L7_I040 A
ypt977_L2_I041 C
ypt978_L2_I052 C
ypt979_L6_I042 M
ypt980_L3_I043 C
ypt981_L2_I044 C
ypt982_L4_I045 M
ypt984 M
yptwj C
147209 M
147830 M
GLF_denovo C
Gallus_Sonneriatii_d C
Ypt4000 C
Ypt4879 C
Ypt4880 C