ggaS0037002555245

Detail information of ggaS0037002555245

1.General Information

SNP ID:	ggaS0037002555245
Organism:	Gallus gallus
Individual:	134S_L2_I047

2.Allele information

Platform:	SOLEXA
Method:	sequence
SNP Class:	SNP
Genotype:	C

3.Reference Map information

Chrom	Position	Reference	134S_L2_I047
chr25	3451	T	C

4.Gene information

Var ID	Gene ID	Transcript ID	Gene Symbol	Variant Effect	Biotype	cDNA Position	Allele Change	Protein ID	Protein Position	Residue Change
ggaS0037002555245	ENSGALG00000009011		SMG5	intron_variant			=>			=>

5.Individual Genotype

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Individual	Genotype
100S	Y
101S_L1_I028	C
102S_L3_I037	Y
103S	T
104S_L7_I029	T
105S_L3_I039	T
106S_L6_I030	Y
107S_L2_I031	C
108S_L6_I032	Y
109S_L5_I033	C
10S_L1_I052	T
110S_L4_I034	T
111S_L3_I047	T
113S_L1_I036	T
114S_L3_I037	C
116S_L6_I038	C
117S_L2_I039	T
118S_L4_I040	C
11S	Y
120S_L1_I041	C
121S_L3_I042	Y
122S_L4_I043	T
123S_L4_I044	C
124S_L2_I048	T
125S_L3_I050	Y
126S_L3_I051	C
127S_L2_I045	C
128S_L1_I042	Y
129S_L3_I043	C
12S_L4_I011	T
130S_L4_I044	Y
131S_L2_I045	C
132S_L2_I046	Y
133S_L8_I046	T
135S_L3_I048	Y
13S_L7_I012	T
14S_L2_I021	T
15S_L6_I022	C
16S_L5_I023	T
17S_L3_I024	T
18833	Y
18S_L7_I025	T
19297	Y
19912	Y
19S_L4_I026	Y
1S	C
20736	C
20S_L7_I027	Y
21S_L6_I028	T
22S_L6_I029	C
23S_L2_I030	C
24S_L4_I031	Y
25S_L3_I032	Y
26S	T
27S_L4_I034	T
28S_L4_I035	Y
29S_L3_I036	T
2S	Y
30S_L2_I037	Y
31S_L3_I038	Y
32S_L1_I039	C
35S_L5_I041	C
36S_L5_I042	C
37S_L2_I043	C
38S_L6_I044	T
39S_L6_I053	C
3S_L4_I003	Y
40S_L2_I054	C
42S_L3_I055	C
43S	Y
44S_L4_I001	Y
45S_L2_I002	C
46S_L4_I003	C
47S_L3_I046	C
48S_L1_I004	T
49S_L1_I005	T
4S_L4_I004	T
50S_L1_I047	C
51S_L6_I048	C
52S_L2_I050	T
53S_L2_I006	Y
54S_L2_I007	C
55S_L1_I008	T
56S_L1_I010	Y
57S_L3_I046	Y
58S_L4_I051	C
59S_L5_I052	T
5S	Y
60S_L5_I053	T
61S_L8_I054	C
62S_L8_I055	Y
63S_L5_I056	Y
64S_L4_I001	C
65S_L5_I002	T
66S_L2_I003	Y
67S_L1_I011	C
68S_L3_I012	Y
69S	C
6S	C
70S	C
71S_L3_I023	T
72S_L1_I024	Y
73S_L1_I025	T
74S_L4_I026	Y
75S_L3_I027	C
76S_L1_I028	C
77S_L4_I029	C
78S_L4_I030	T
79S_L2_I031	Y
7S_L4_I007	Y
80S_L3_I004	C
81S_L1_I005	T
82S	Y
83S_L3_I033	C
84S_L5_I006	Y
85S_L5_I007	T
86S_L5_I008	T
87S_L5_I010	C
88S_L4_I011	Y
91S_L4_I022	T
92S_L5_I023	C
93S_L7_I024	C
95S_L8_I025	T
96S_L4_I026	Y
97S_L8_I027	T
99S_L2_I035	Y
9S	T
A1	T
A10	T
A12	T
A14	C
A3	T
A8	T
BKL2	C
BLB1_L2_I007	T
BLB2_L2_I008	T
BLO1	T
BLO11	T
BLO15	T
BLO2	T
BLO3_L4_I022	T
BOJA2	T
BYW3_L3_I033	T
GVF	T
India1	T
India11	Y
India13	T
India15	C
India17	C
India19	Y
India21	T
India23	C
India25	Y
India27	T
India29	C
India31	Y
India33	C
India35	C
India37	C
India39	C
India41	C
India43	Y
India45	Y
India47	Y
India5	Y
India51	Y
India55	C
India57	Y
India59	Y
India61	C
India7	T
India9	Y
L2	C
N1	T
N11	T
N13	Y
N18	T
N3	C
N5	T
N8	Y
S-f1_L4_I106	C
S-f2_I107	Y
S-f3_I108	C
S-f4_L4_I109	Y
S-m1_I101	C
S-m2_I102	C
S-m3_I103	C
S-m4_L2_I104	C
S-m5_I105	Y
S6	Y
SAMN02486156	T
SAMN02486157	C
SAMN02486158	T
SAMN02486159	T
SAMN02486160	Y
SAMN02486161	Y
SAMN02486162	T
SAMN02486163	Y
SAMN02486164	Y
SAMN02486165	T
SAMN02486166	C
SAMN02486167	Y
Silkia	Y
T2	C
T3	T
T5	C
TD1	C
TD12	Y
TD15	T
TD22	Y
TD27	T
TD30	Y
TD6	Y
TD9	C
Tibet	T
Xcelris_101	T
Xcelris_104	C
Xcelris_10A	C
Xcelris_10B	Y
Xcelris_112	Y
Xcelris_113	C
Xcelris_11B	Y
Xcelris_12	T
Xcelris_120	C
Xcelris_127	Y
Xcelris_128	C
Xcelris_129	T
Xcelris_13	T
Xcelris_13B	C
Xcelris_14	T
Xcelris_141	C
Xcelris_143	T
Xcelris_14A	Y
Xcelris_174	T
Xcelris_1A	T
Xcelris_1B	C
Xcelris_219	C
Xcelris_221	Y
Xcelris_222	C
Xcelris_224	C
Xcelris_226	Y
Xcelris_227	C
Xcelris_276	C
Xcelris_2A	T
Xcelris_2B	C
Xcelris_331	T
Xcelris_332	Y
Xcelris_333	C
Xcelris_335	C
Xcelris_336	Y
Xcelris_339	C
Xcelris_340	Y
Xcelris_341	T
Xcelris_377	C
Xcelris_378	C
Xcelris_379	Y
Xcelris_380	Y
Xcelris_381	C
Xcelris_382	C
Xcelris_383	C
Xcelris_384	C
Xcelris_385	C
Xcelris_392	Y
Xcelris_394	C
Xcelris_4B	C
Xcelris_5	T
Xcelris_5A	T
Xcelris_5B	C
Xcelris_67	Y
Xcelris_6A	C
Xcelris_6B	T
Xcelris_7	Y
Xcelris_77	C
Xcelris_8	T
Xcelris_84	C
Xcelris_8A	Y
Xcelris_8B	C
Xcelris_90	C
Xcelris_97	T
Xcelris_98	C
Xcelris_MT-18	T
Xcelris_MT-6	C
Xcelris_MT-85	T
Xcelris_MT-99	C
Y1-f1_L5_I119	T
Y1-f2_L6_I121	T
Y1-f3_L7_I101	T
Y1-m1_L6_I120	T
Y1-m2_L4_I122	T
Y1-m3_L7_I123	Y
Y1-m4_I124	C
Y1-m5_L7_I102	T
YPt565	Y
YPt601	C
YPt604	Y
YPt609	Y
YPt610	T
YPt637	Y
YPt641	C
YPt648	Y
You1	T
You3_L7_I1000005	T
Ypt566	Y
Ypt567	Y
Ypt568	T
Ypt569	T
Ypt570	Y
Ypt571	T
Ypt572	T
Ypt573	C
Ypt574	C
Ypt575	T
Ypt576	T
Ypt577	T
Ypt578	C
Ypt579	C
Ypt580	C
Ypt581	Y
Ypt582	C
Ypt583	Y
Ypt584	C
Ypt585	C
Ypt586	C
Ypt587	C
Ypt588	C
Ypt589	Y
Ypt590	C
Ypt591	C
Ypt592	C
Ypt593	C
Ypt594	C
Ypt595	C
Ypt596	C
Ypt597	C
Ypt598	C
Ypt599	C
Ypt600	C
Ypt602	C
Ypt603	Y
Ypt606	T
Ypt607	C
Ypt608	C
Ypt622	C
Ypt623	Y
Ypt624	Y
Ypt626	C
Ypt638	Y
Ypt640	C
Ypt642	Y
Ypt643	C
Ypt645	Y
Ypt646	T
Ypt647	Y
Yt516	C
Yt517	Y
Yt518	Y
Yt519	C
Yt520	T
Yt521	T
Yt522	C
Yt523	C
Yt524	Y
Yt525	Y
Yt526	Y
Yt527	Y
Yt528	Y
Yt529	Y
Yt530	Y
Yt531	Y
Yt536	T
Yt538	T
Yt539	T
Yt540	Y
ZJ1	Y
ZJ2	T
ZJ3	C
ZJ4	C
india3	T
india49	Y
production	C
yp914ypt	Y
ypt169_L3_I011	C
ypt170_L2_I012	C
ypt171_L2_I021	Y
ypt175_L2_I023	C
ypt2051_L3_I003	C
ypt2053_L6_I004	Y
ypt2063_L6_I005	T
ypt2069_L6_I006	Y
ypt2071_L1_I038	Y
ypt2082	T
ypt2086	T
ypt2087	Y
ypt2091	C
ypt2092	C
ypt2093	Y
ypt2094	Y
ypt2095	Y
ypt2098	T
ypt2100	Y
ypt2101	Y
ypt2102	Y
ypt2103	Y
ypt2105	Y
ypt2106	T
ypt2107	Y
ypt2108	C
ypt2109	T
ypt2110	Y
ypt2111	Y
ypt2112	T
ypt2114	Y
ypt2115	C
ypt2116	Y
ypt2117	C
ypt2118	T
ypt2119	C
ypt2120	C
ypt2121	C
ypt2122	Y
ypt2124_L4_I052	Y
ypt2127_L1_I036	Y
ypt2128_L6_I054	C
ypt2144_L6_I055	T
ypt2145_L6_I056	C
ypt2146_L6_I001	C
ypt2163	C
ypt2164	T
ypt2165	Y
ypt2166	Y
ypt2167	C
ypt2168	Y
ypt2169	Y
ypt2170	Y
ypt2171	T
ypt2172	C
ypt2173	Y
ypt2174	T
ypt2175	T
ypt2176	T
ypt2177	T
ypt2178	C
ypt217_L2_I024	T
ypt2184	Y
ypt2185	T
ypt2186	T
ypt2187	Y
ypt2189	Y
ypt2190	T
ypt2191	Y
ypt219_L3_I025	C
ypt2200	C
ypt2201	C
ypt2205	T
ypt2209	T
ypt220_L2_I026	Y
ypt2214	C
ypt2215	T
ypt2216	Y
ypt2217	Y
ypt2218	C
ypt2219	C
ypt221_L3_I042	Y
ypt2220	C
ypt2221	Y
ypt2222	T
ypt222_L3_I027	T
ypt2437	T
ypt2438	Y
ypt2439	C
ypt2440	Y
ypt2441	C
ypt2442	T
ypt2443	T
ypt2444	T
ypt2446	T
ypt2447	C
ypt2448	C
ypt2449	T
ypt2454	C
ypt2468	Y
ypt2496	C
ypt2497	Y
ypt2498	T
ypt2499	C
ypt2500	T
ypt2503	Y
ypt2504	C
ypt2507	C
ypt2512	Y
ypt2516	C
ypt2521	T
ypt2523	Y
ypt2534	C
ypt2541	Y
ypt2543	T
ypt2544	T
ypt2545	Y
ypt2546	T
ypt2547	T
ypt2552	C
ypt2562	T
ypt2563	T
ypt2569	Y
ypt2570	T
ypt2571	Y
ypt2572	Y
ypt2573	Y
ypt2574	C
ypt2575	C
ypt2579	Y
ypt258_L3_I028	T
ypt2598	C
ypt259_L2_I029	C
ypt2601	Y
ypt2606	Y
ypt2608	T
ypt2615	T
ypt2622	Y
ypt2623	T
ypt2624	Y
ypt2625	Y
ypt2627	Y
ypt2628	C
ypt262_L3_I030	C
ypt2630	C
ypt2636	C
ypt2638	T
ypt263_L3_I031	C
ypt2640	Y
ypt2641	C
ypt2644	C
ypt2646	Y
ypt264_L3_I032	Y
ypt2650	C
ypt2653	C
ypt2656	C
ypt2657	T
ypt2658	T
ypt2661	T
ypt2664	C
ypt2665	C
ypt2669	T
ypt2670	Y
ypt2671	C
ypt2672	T
ypt2673	Y
ypt2678	Y
ypt2706	C
ypt2722	T
ypt2724	Y
ypt2729	T
ypt2733	C
ypt2739	Y
ypt2740	Y
ypt2745	C
ypt2746	T
ypt2760	Y
ypt2761	C
ypt2765	Y
ypt2766	C
ypt2775	C
ypt2780	C
ypt2781	T
ypt2782	Y
ypt2783	T
ypt2784	Y
ypt2785	C
ypt2786	C
ypt2787	C
ypt2788	T
ypt2789	Y
ypt2790	Y
ypt2791	C
ypt2792	T
ypt2799	Y
ypt2800	C
ypt2808	Y
ypt2810	T
ypt2812	T
ypt2813	C
ypt2814	Y
ypt2817	T
ypt2819	C
ypt2821	C
ypt2822	T
ypt2823	Y
ypt2824	T
ypt2826	Y
ypt2827	T
ypt2828	T
ypt2831	T
ypt2832	T
ypt2842	C
ypt2843	T
ypt2849	T
ypt2859	C
ypt2860	T
ypt2861	T
ypt2862	T
ypt2863	T
ypt2870	T
ypt2871	T
ypt2887	T
ypt2888	T
ypt2889	T
ypt2891_L3_I041	T
ypt2892	T
ypt2893_L3_I025	Y
ypt2894	T
ypt2895_L3_I026	C
ypt2902	C
ypt2909	Y
ypt2910	T
ypt2911	C
ypt2912	Y
ypt2918	T
ypt2929	C
ypt2930	Y
ypt3001	C
ypt3002	C
ypt3003	C
ypt3004	C
ypt3005	C
ypt3006	Y
ypt3007	Y
ypt3008	Y
ypt3009	Y
ypt3010	Y
ypt3011	C
ypt3012	Y
ypt3016	Y
ypt3017	C
ypt3028	T
ypt3038	Y
ypt3040	C
ypt3041	T
ypt3042	T
ypt3043	Y
ypt3044	T
ypt3045	C
ypt3046	T
ypt3050	Y
ypt3051	C
ypt3052	Y
ypt3061	C
ypt3069	Y
ypt3072	C
ypt3133	C
ypt3134	C
ypt3135	C
ypt3136	Y
ypt3137	Y
ypt3138	T
ypt3139	C
ypt3140	T
ypt3141	T
ypt3142	Y
ypt3143	Y
ypt3144_L3_I039	T
ypt3145	Y
ypt3146	Y
ypt3149_L2_I034	T
ypt3150_L8_I023	C
ypt3159_L6_I035	Y
ypt3160_L8_I024	Y
ypt3162_L6_I036	C
ypt3179_L8_I025	T
ypt3180	C
ypt3181_L7_I038	C
ypt3182_L1_I039	Y
ypt3189_L1_I040	T
ypt3190_L8_I026	Y
ypt3191_L2_I041	T
ypt3193_L1_I027	Y
ypt3195_L1_I042	Y
ypt3196_L2_I043	C
ypt3197_L1_I044	T
ypt3204_L7_I046	T
ypt3205_L2_I047	C
ypt3207_L6_I050	C
ypt3210_L6_I051	Y
ypt3211_L6_I052	Y
ypt3212_L4_I028	C
ypt3219_L1_I030	Y
ypt3220_L1_I031	T
ypt3221_L1_I032	C
ypt3222_L1_I033	Y
ypt3224_L8_I043	C
ypt3225_L2_I053	T
ypt3228-7_L1_I034	T
ypt3238_L3_I046	C
ypt3239_L1_I035	T
ypt3240_L6_I054	C
ypt3243_L8_I047	T
ypt3246_L6_I050	Y
ypt3257_L1_I056	T
ypt3260_L6_I003	T
ypt3261_L7_I004	C
ypt3262_L7_I005	C
ypt3269_L7_I006	Y
ypt3270_L1_I007	C
ypt3271_L7_I008	C
ypt3272_L7_I010	Y
ypt3274A_L7_I011	C
ypt3276_L7_I021	C
ypt47_L2_I029	T
ypt50_L2_I030	C
ypt53_L2_I032	T
ypt55_L1_I033	Y
ypt890	C
ypt891	C
ypt896_L2_I047	Y
ypt897_L3_I048	C
ypt898	Y
ypt899_L6_I051	T
ypt901_L1_I052	C
ypt902_L1_I053	C
ypt903_L2_I054	Y
ypt904_L4_I055	Y
ypt905_L6_I056	C
ypt906_L3_I001	C
ypt907_L6_I002	C
ypt908_L1_I003	C
ypt909_L5_I004	C
ypt910_L3_I005	Y
ypt911_L6_I006	C
ypt915	C
ypt916	T
ypt917	T
ypt918_L3_I007	C
ypt919_L4_I008	Y
ypt920_L5_I010	C
ypt921_L8_I011	T
ypt922_L4_I012	Y
ypt923_L2_I051	C
ypt924_L3_I021	T
ypt925_L2_I022	C
ypt926_L2_I023	Y
ypt928	C
ypt929	C
ypt930	T
ypt931	C
ypt933	T
ypt937	C
ypt938x	T
ypt940_L4_I026	C
ypt941_L5_I027	T
ypt942_L7_I028	T
ypt943	T
ypt944_L3_I030	T
ypt945_L4_I031	T
ypt946_L4_I032	Y
ypt947_L5_I033	C
ypt948_L2_I034	T
ypt949_L3_I035	Y
ypt950_L5_I036	C
ypt951	Y
ypt952	Y
ypt953	T
ypt954	Y
ypt955	C
ypt956x	Y
ypt957	T
ypt958	T
ypt959	Y
ypt960	Y
ypt961	T
ypt962	T
ypt963	Y
ypt964	T
ypt965	T
ypt966	C
ypt971	C
ypt972x	T
ypt973_L4_I037	T
ypt974	T
ypt975_L8_I039	C
ypt976_L7_I040	C
ypt977_L2_I041	C
ypt978_L2_I052	Y
ypt979_L6_I042	C
ypt980_L3_I043	Y
ypt981_L2_I044	C
ypt982_L4_I045	C
ypt984	C
yptwj	C
147209	C
147830	Y
GLF_denovo	C
Gallus_Sonneriatii_d	C
Ypt4000	C
Ypt4879	C
Ypt4880	C