ChickenSD

ChickenSD / Individual SNP / ggaS0037002555240

Detail information of ggaS0037002555240

1.General Information

SNP ID: ggaS0037002555240
Organism: Gallus gallus
Individual: 134S_L2_I047

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: T

3.Reference Map information

Chrom Position Reference 134S_L2_I047
chr25 1802 C T

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0037002555240 ENSGALG00000009011 SMG5 intron_variant => =>

5.Individual Genotype

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Individual Genotype
100S C
101S_L1_I028 T
102S_L3_I037 C
103S C
105S_L3_I039 T
106S_L6_I030 T
107S_L2_I031 C
108S_L6_I032 T
109S_L5_I033 T
10S_L1_I052 C
110S_L4_I034 C
111S_L3_I047 T
112S_L3_I035 T
113S_L1_I036 Y
114S_L3_I037 T
116S_L6_I038 T
117S_L2_I039 T
118S_L4_I040 Y
119S_L3_I041 Y
11S T
120S_L1_I041 T
121S_L3_I042 C
124S_L2_I048 T
125S_L3_I050 C
126S_L3_I051 T
127S_L2_I045 T
128S_L1_I042 Y
129S_L3_I043 C
12S_L4_I011 T
130S_L4_I044 Y
131S_L2_I045 Y
132S_L2_I046 T
135S_L3_I048 T
13S_L7_I012 T
14S_L2_I021 T
15S_L6_I022 T
16S_L5_I023 T
17S_L3_I024 T
18833 T
18S_L7_I025 T
19297 Y
19912 T
19S_L4_I026 T
1S Y
20736 C
20S_L7_I027 T
21S_L6_I028 Y
22S_L6_I029 T
24S_L4_I031 T
25S_L3_I032 T
26S T
27S_L4_I034 Y
29S_L3_I036 T
2S Y
30S_L2_I037 C
31S_L3_I038 T
32S_L1_I039 C
33S Y
35S_L5_I041 T
36S_L5_I042 Y
38S_L6_I044 C
39S_L6_I053 C
40S_L2_I054 T
42S_L3_I055 T
43S Y
44S_L4_I001 T
45S_L2_I002 T
46S_L4_I003 Y
48S_L1_I004 Y
49S_L1_I005 T
4S_L4_I004 T
50S_L1_I047 T
51S_L6_I048 T
52S_L2_I050 T
53S_L2_I006 Y
54S_L2_I007 T
55S_L1_I008 T
56S_L1_I010 T
57S_L3_I046 T
58S_L4_I051 T
59S_L5_I052 T
5S T
60S_L5_I053 C
61S_L8_I054 C
62S_L8_I055 C
63S_L5_I056 T
64S_L4_I001 T
65S_L5_I002 T
66S_L2_I003 T
67S_L1_I011 Y
68S_L3_I012 T
69S Y
6S T
71S_L3_I023 T
72S_L1_I024 T
73S_L1_I025 Y
74S_L4_I026 C
75S_L3_I027 T
76S_L1_I028 T
77S_L4_I029 T
78S_L4_I030 T
79S_L2_I031 C
7S_L4_I007 Y
80S_L3_I004 T
81S_L1_I005 C
82S T
83S_L3_I033 T
84S_L5_I006 T
85S_L5_I007 T
86S_L5_I008 T
87S_L5_I010 T
90S_L4_I021 T
92S_L5_I023 T
93S_L7_I024 T
95S_L8_I025 T
96S_L4_I026 T
97S_L8_I027 C
98S_L3_I034 T
99S_L2_I035 T
9S T
A1 C
A10 T
A12 T
A14 T
A3 T
A8 C
BKL2 T
BLO1 C
BLO11 Y
BLO15 C
BLO2 C
BOJA2 C
GVF C
India1 T
India11 T
India13 Y
India15 T
India17 T
India19 Y
India21 C
India23 Y
India25 T
India27 Y
India29 Y
India31 T
India33 Y
India35 T
India37 Y
India39 Y
India43 T
India45 T
India47 Y
India5 T
India51 T
India55 Y
India59 Y
India61 T
India7 Y
India9 Y
L2 T
N1 C
N11 T
N13 Y
N18 Y
N5 C
N7 T
N8 T
S-f1_L4_I106 C
S-f2_I107 T
S-f3_I108 T
S-m1_I101 T
S-m2_I102 T
S-m3_I103 Y
S-m4_L2_I104 C
S-m5_I105 T
SAMN02486156 T
SAMN02486157 C
SAMN02486158 Y
SAMN02486159 T
SAMN02486160 T
SAMN02486163 T
SAMN02486164 T
SAMN02486165 Y
SAMN02486166 T
SAMN02486167 T
Silkia Y
T2 T
T3 Y
T5 Y
TD1 C
TD12 T
TD15 T
TD22 Y
TD27 C
TD30 C
TD6 C
TD9 C
Tibet Y
Xcelris_10 T
Xcelris_101 T
Xcelris_104 T
Xcelris_105 T
Xcelris_10A T
Xcelris_10B T
Xcelris_112 T
Xcelris_11B C
Xcelris_12 Y
Xcelris_120 C
Xcelris_127 T
Xcelris_128 Y
Xcelris_129 C
Xcelris_12A C
Xcelris_137 C
Xcelris_141 T
Xcelris_143 T
Xcelris_14B T
Xcelris_174 T
Xcelris_175 T
Xcelris_176 T
Xcelris_1A C
Xcelris_1B T
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 C
Xcelris_276 Y
Xcelris_280 C
Xcelris_2A Y
Xcelris_2B C
Xcelris_333 C
Xcelris_335 Y
Xcelris_336 C
Xcelris_339 C
Xcelris_340 C
Xcelris_341 C
Xcelris_378 T
Xcelris_379 C
Xcelris_380 C
Xcelris_382 T
Xcelris_383 C
Xcelris_384 C
Xcelris_385 C
Xcelris_394 T
Xcelris_6B Y
Xcelris_7 T
Xcelris_8 T
Xcelris_84 C
Xcelris_8A T
Xcelris_90 C
Xcelris_97 T
Xcelris_98 T
Xcelris_MT-134 C
Xcelris_MT-18 C
Xcelris_MT-38 C
Xcelris_MT-48 Y
Xcelris_MT-6 T
Xcelris_MT-85 C
Y1-f1_L5_I119 T
Y1-f2_L6_I121 T
Y1-f3_L7_I101 C
Y1-m1_L6_I120 T
Y1-m2_L4_I122 T
Y1-m3_L7_I123 T
Y1-m5_L7_I102 T
YPt565 T
YPt601 T
YPt604 C
YPt609 T
YPt610 T
YPt637 Y
YPt641 T
YPt648 T
You1 C
You3_L7_I1000005 T
Ypt566 T
Ypt567 Y
Ypt568 C
Ypt569 C
Ypt570 C
Ypt571 T
Ypt572 C
Ypt573 T
Ypt574 Y
Ypt575 Y
Ypt577 T
Ypt578 Y
Ypt579 C
Ypt580 T
Ypt581 Y
Ypt582 T
Ypt583 T
Ypt584 Y
Ypt585 C
Ypt586 T
Ypt587 Y
Ypt588 T
Ypt589 Y
Ypt590 T
Ypt592 T
Ypt593 T
Ypt594 T
Ypt595 C
Ypt596 T
Ypt597 T
Ypt598 C
Ypt599 T
Ypt602 Y
Ypt603 C
Ypt606 Y
Ypt607 Y
Ypt608 Y
Ypt622 T
Ypt623 Y
Ypt624 T
Ypt626 T
Ypt638 T
Ypt640 Y
Ypt642 T
Ypt643 T
Ypt645 T
Ypt646 T
Ypt647 Y
Yt516 T
Yt517 Y
Yt518 T
Yt519 Y
Yt520 Y
Yt521 C
Yt522 Y
Yt523 T
Yt524 Y
Yt525 Y
Yt526 Y
Yt527 C
Yt528 T
Yt529 T
Yt530 T
Yt531 T
Yt536 T
Yt538 T
Yt539 Y
Yt540 T
ZJ1 Y
ZJ2 T
ZJ3 T
ZJ4 T
india3 T
production T
ypt169_L3_I011 T
ypt170_L2_I012 T
ypt171_L2_I021 T
ypt173_L2_I022 T
ypt175_L2_I023 C
ypt2041_L6_I002 T
ypt2051_L3_I003 C
ypt2053_L6_I004 C
ypt2063_L6_I005 T
ypt2071_L1_I038 T
ypt2086 Y
ypt2087 Y
ypt2091 T
ypt2092 T
ypt2093 T
ypt2094 T
ypt2095 C
ypt2098 Y
ypt2100 T
ypt2101 T
ypt2102 T
ypt2103 Y
ypt2105 T
ypt2106 C
ypt2107 T
ypt2108 T
ypt2110 T
ypt2111 T
ypt2112 T
ypt2115 T
ypt2116 T
ypt2117 T
ypt2120 Y
ypt2121 T
ypt2124_L4_I052 T
ypt2127_L1_I036 T
ypt2163 T
ypt2164 T
ypt2165 Y
ypt2166 C
ypt2167 T
ypt2168 T
ypt2169 T
ypt2170 Y
ypt2171 C
ypt2172 Y
ypt2173 Y
ypt2174 T
ypt2175 Y
ypt2176 T
ypt2177 Y
ypt2178 T
ypt217_L2_I024 T
ypt2184 T
ypt2186 C
ypt2187 Y
ypt2189 Y
ypt2190 T
ypt2191 T
ypt219_L3_I025 T
ypt2200 T
ypt2201 Y
ypt2205 T
ypt2209 T
ypt220_L2_I026 T
ypt2214 T
ypt2215 Y
ypt2217 C
ypt2218 T
ypt221_L3_I042 C
ypt2220 T
ypt2221 C
ypt2222 C
ypt2437 T
ypt2438 T
ypt2439 C
ypt2440 T
ypt2441 T
ypt2442 C
ypt2443 C
ypt2444 T
ypt2445 T
ypt2446 Y
ypt2447 T
ypt2448 T
ypt2449 T
ypt2454 Y
ypt2459 Y
ypt2468 T
ypt2496 T
ypt2497 C
ypt2500 T
ypt2503 C
ypt2504 T
ypt2507 T
ypt2512 Y
ypt2516 C
ypt2521 T
ypt2523 Y
ypt2534 Y
ypt2541 T
ypt2544 T
ypt2545 T
ypt2546 T
ypt2547 T
ypt2552 T
ypt2562 T
ypt2563 T
ypt2569 T
ypt2570 T
ypt2571 Y
ypt2572 T
ypt2573 T
ypt2574 Y
ypt2575 C
ypt2579 T
ypt258_L3_I028 Y
ypt2598 T
ypt2601 T
ypt2606 T
ypt2608 T
ypt2615 Y
ypt2623 T
ypt2624 Y
ypt2625 C
ypt2627 T
ypt2628 C
ypt2629 Y
ypt262_L3_I030 T
ypt2630 Y
ypt2638 C
ypt263_L3_I031 C
ypt2641 T
ypt2644 T
ypt2646 Y
ypt264_L3_I032 T
ypt2650 T
ypt2653 Y
ypt2657 Y
ypt2658 T
ypt2661 T
ypt2664 T
ypt2665 T
ypt2669 T
ypt2670 Y
ypt2671 T
ypt2672 T
ypt2673 T
ypt2678 T
ypt2706 T
ypt2722 T
ypt2724 T
ypt2729 C
ypt2733 C
ypt2739 C
ypt2740 T
ypt2745 T
ypt2746 T
ypt2760 T
ypt2761 Y
ypt2765 T
ypt2766 Y
ypt2775 T
ypt2781 T
ypt2782 T
ypt2783 Y
ypt2784 C
ypt2785 T
ypt2786 T
ypt2787 T
ypt2788 T
ypt2789 C
ypt2790 Y
ypt2791 T
ypt2792 C
ypt2799 T
ypt2800 T
ypt2808 T
ypt2810 T
ypt2812 T
ypt2813 T
ypt2816 T
ypt2819 T
ypt2821 T
ypt2822 T
ypt2823 T
ypt2824 C
ypt2825 T
ypt2826 T
ypt2827 T
ypt2828 C
ypt2831 T
ypt2832 T
ypt2842 T
ypt2843 T
ypt2849 C
ypt2859 T
ypt2862 C
ypt2863 Y
ypt2870 C
ypt2871 C
ypt2888 C
ypt2891_L3_I041 C
ypt2892 T
ypt2893_L3_I025 T
ypt2894 Y
ypt2895_L3_I026 T
ypt2902 T
ypt2909 Y
ypt2910 C
ypt2911 Y
ypt2912 T
ypt2918 Y
ypt2929 Y
ypt2930 T
ypt3001 Y
ypt3002 T
ypt3003 Y
ypt3004 Y
ypt3006 T
ypt3007 T
ypt3008 Y
ypt3009 T
ypt3010 T
ypt3011 Y
ypt3016 Y
ypt3017 T
ypt3028 Y
ypt3038 Y
ypt3040 T
ypt3041 C
ypt3042 T
ypt3043 Y
ypt3044 Y
ypt3046 C
ypt3047 T
ypt3050 T
ypt3051 C
ypt3052 T
ypt3061 T
ypt3072 T
ypt3133 T
ypt3134 Y
ypt3135 C
ypt3136 T
ypt3138 T
ypt3139 C
ypt3140 Y
ypt3141 T
ypt3142 T
ypt3145 T
ypt3146 T
ypt3149_L2_I034 Y
ypt3150_L8_I023 T
ypt3159_L6_I035 T
ypt3160_L8_I024 Y
ypt3162_L6_I036 T
ypt3179_L8_I025 Y
ypt3180 Y
ypt3181_L7_I038 C
ypt3182_L1_I039 T
ypt3189_L1_I040 T
ypt3190_L8_I026 Y
ypt3191_L2_I041 C
ypt3193_L1_I027 C
ypt3195_L1_I042 C
ypt3196_L2_I043 C
ypt3197_L1_I044 Y
ypt3198_L2_I045 T
ypt3204_L7_I046 T
ypt3205_L2_I047 T
ypt3206_L1_I048 T
ypt3207_L6_I050 T
ypt3210_L6_I051 T
ypt3211_L6_I052 T
ypt3219_L1_I030 C
ypt3220_L1_I031 Y
ypt3221_L1_I032 C
ypt3222_L1_I033 T
ypt3224_L8_I043 Y
ypt3225_L2_I053 C
ypt3226_L3_I044 C
ypt3229_L8_I045 C
ypt3240_L6_I054 T
ypt3243_L8_I047 T
ypt3247_L6_I051 T
ypt3257_L1_I056 T
ypt3258_L3_I001 T
ypt3259_L6_I002 T
ypt3260_L6_I003 C
ypt3261_L7_I004 T
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 C
ypt3276_L7_I021 Y
ypt3289_L8_I021 C
ypt47_L2_I029 Y
ypt50_L2_I030 C
ypt890 C
ypt891 Y
ypt896_L2_I047 C
ypt897_L3_I048 C
ypt898 C
ypt899_L6_I051 C
ypt902_L1_I053 T
ypt903_L2_I054 C
ypt904_L4_I055 C
ypt906_L3_I001 T
ypt907_L6_I002 C
ypt908_L1_I003 C
ypt909_L5_I004 C
ypt911_L6_I006 T
ypt921_L8_I011 Y
ypt922_L4_I012 T
ypt924_L3_I021 T
ypt925_L2_I022 C
ypt926_L2_I023 T
ypt929 C
ypt930 T
ypt931 T
ypt932 C
ypt933 C
ypt934x C
ypt936 Y
ypt937 T
ypt938x C
ypt941_L5_I027 T
ypt942_L7_I028 T
ypt943 C
ypt944_L3_I030 T
ypt945_L4_I031 T
ypt946_L4_I032 T
ypt948_L2_I034 T
ypt949_L3_I035 T
ypt950_L5_I036 T
ypt951 C
ypt952 T
ypt953 T
ypt954 Y
ypt955 T
ypt956x T
ypt957 C
ypt958 T
ypt959 T
ypt960 Y
ypt961 C
ypt962 C
ypt963 C
ypt964 T
ypt965 C
ypt966 T
ypt971 Y
ypt972x Y
ypt974 T
ypt975_L8_I039 Y
ypt976_L7_I040 C
ypt977_L2_I041 T
ypt978_L2_I052 Y
ypt979_L6_I042 T
ypt980_L3_I043 T
ypt981_L2_I044 Y
ypt982_L4_I045 C
ypt984 T
yptwj Y
147209 T
147830 Y
GLF_denovo T
Ypt4000 T
Ypt4879 T
Ypt4880 T