ChickenSD

ChickenSD / Individual SNP / ggaS0037002555239

Detail information of ggaS0037002555239

1.General Information

SNP ID: ggaS0037002555239
Organism: Gallus gallus
Individual: 134S_L2_I047

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 134S_L2_I047
chr25 1319 A C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0037002555239 ENSGALG00000009011 SMG5 intron_variant => =>

5.Individual Genotype

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Individual Genotype
100S M
101S_L1_I028 C
102S_L3_I037 C
103S A
104S_L7_I029 A
105S_L3_I039 A
106S_L6_I030 C
107S_L2_I031 M
108S_L6_I032 C
109S_L5_I033 M
10S_L1_I052 M
110S_L4_I034 M
111S_L3_I047 M
112S_L3_I035 C
113S_L1_I036 C
114S_L3_I037 M
116S_L6_I038 C
117S_L2_I039 C
118S_L4_I040 A
119S_L3_I041 A
11S C
120S_L1_I041 C
123S_L4_I044 M
124S_L2_I048 C
125S_L3_I050 A
126S_L3_I051 A
127S_L2_I045 A
128S_L1_I042 C
129S_L3_I043 C
12S_L4_I011 C
130S_L4_I044 M
131S_L2_I045 M
132S_L2_I046 M
133S_L8_I046 C
135S_L3_I048 M
13S_L7_I012 M
14S_L2_I021 C
15S_L6_I022 C
16S_L5_I023 C
17S_L3_I024 M
18833 C
18S_L7_I025 C
19297 M
19912 C
19S_L4_I026 C
1S C
20736 C
20S_L7_I027 C
21S_L6_I028 C
22S_L6_I029 M
23S_L2_I030 C
24S_L4_I031 C
25S_L3_I032 C
26S A
27S_L4_I034 M
28S_L4_I035 M
29S_L3_I036 C
2S M
30S_L2_I037 A
31S_L3_I038 C
32S_L1_I039 A
33S M
35S_L5_I041 A
36S_L5_I042 C
37S_L2_I043 M
39S_L6_I053 C
3S_L4_I003 M
40S_L2_I054 C
41S_L5_I045 C
42S_L3_I055 C
43S C
44S_L4_I001 C
45S_L2_I002 C
46S_L4_I003 M
47S_L3_I046 C
48S_L1_I004 C
49S_L1_I005 C
4S_L4_I004 M
50S_L1_I047 M
51S_L6_I048 C
52S_L2_I050 C
53S_L2_I006 M
54S_L2_I007 M
55S_L1_I008 M
56S_L1_I010 A
57S_L3_I046 C
58S_L4_I051 A
59S_L5_I052 A
5S A
60S_L5_I053 C
62S_L8_I055 A
63S_L5_I056 C
64S_L4_I001 C
66S_L2_I003 C
67S_L1_I011 M
68S_L3_I012 C
69S M
6S M
70S M
71S_L3_I023 C
72S_L1_I024 C
73S_L1_I025 M
74S_L4_I026 M
75S_L3_I027 C
76S_L1_I028 C
77S_L4_I029 M
78S_L4_I030 C
79S_L2_I031 C
7S_L4_I007 M
80S_L3_I004 C
81S_L1_I005 A
82S A
83S_L3_I033 C
84S_L5_I006 M
85S_L5_I007 M
86S_L5_I008 A
87S_L5_I010 C
88S_L4_I011 A
89S_L6_I012 A
90S_L4_I021 A
91S_L4_I022 C
92S_L5_I023 C
93S_L7_I024 M
95S_L8_I025 A
96S_L4_I026 A
97S_L8_I027 A
98S_L3_I034 A
99S_L2_I035 M
9S C
A1 A
A10 A
A12 C
A14 C
A3 C
A8 C
BKL2 C
BLB1_L2_I007 C
BLB2_L2_I008 C
BLO1 C
BLO11 C
BLO15 C
BLO2 C
BLO3_L4_I022 C
BOJA2 C
GVF C
India1 C
India11 C
India13 A
India17 C
India19 C
India21 A
India23 C
India25 C
India27 M
India29 M
India31 C
India33 C
India35 C
India37 M
India39 A
India41 C
India43 C
India45 C
India47 M
India5 C
India51 M
India55 C
India57 C
India59 C
India61 C
India7 C
India9 C
L2 A
N1 M
N11 C
N13 C
N18 C
N3 M
N5 C
N7 C
N8 C
S-f1_L4_I106 M
S-f2_I107 C
S-f3_I108 A
S-f4_L4_I109 M
S-m1_I101 M
S-m2_I102 C
S-m3_I103 A
S-m4_L2_I104 C
S-m5_I105 C
S6 C
SAMN02486156 C
SAMN02486157 A
SAMN02486158 C
SAMN02486159 C
SAMN02486160 M
SAMN02486161 C
SAMN02486163 C
SAMN02486165 C
SAMN02486166 C
SAMN02486167 A
Silkia A
T2 M
T3 M
T5 M
TD1 C
TD12 M
TD15 C
TD22 C
TD27 C
TD30 M
TD6 M
TD9 A
Tibet M
Xcelris_101 C
Xcelris_104 C
Xcelris_105 C
Xcelris_10A C
Xcelris_10B C
Xcelris_112 A
Xcelris_12 C
Xcelris_120 C
Xcelris_127 C
Xcelris_128 C
Xcelris_129 C
Xcelris_12A M
Xcelris_137 C
Xcelris_13B A
Xcelris_14 C
Xcelris_142 C
Xcelris_143 C
Xcelris_14A C
Xcelris_14B C
Xcelris_174 A
Xcelris_1B C
Xcelris_219 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 C
Xcelris_227 C
Xcelris_276 C
Xcelris_279 C
Xcelris_280 C
Xcelris_2B A
Xcelris_3 C
Xcelris_331 C
Xcelris_332 C
Xcelris_333 C
Xcelris_335 C
Xcelris_336 C
Xcelris_339 C
Xcelris_340 C
Xcelris_341 C
Xcelris_377 C
Xcelris_378 C
Xcelris_380 C
Xcelris_381 C
Xcelris_382 C
Xcelris_384 C
Xcelris_385 C
Xcelris_392 A
Xcelris_394 C
Xcelris_44 C
Xcelris_4B A
Xcelris_5A M
Xcelris_5B A
Xcelris_67 C
Xcelris_6B M
Xcelris_7 C
Xcelris_77 C
Xcelris_84 C
Xcelris_8A C
Xcelris_90 C
Xcelris_97 C
Xcelris_98 C
Xcelris_MT-134 C
Xcelris_MT-18 C
Xcelris_MT-48 C
Xcelris_MT-9 A
Y1-f1_L5_I119 C
Y1-f2_L6_I121 C
Y1-f3_L7_I101 A
Y1-m1_L6_I120 M
Y1-m2_L4_I122 M
Y1-m3_L7_I123 A
Y1-m4_I124 A
Y1-m5_L7_I102 C
YPt565 C
YPt601 C
YPt604 M
YPt609 C
YPt610 C
YPt637 M
YPt641 M
YPt648 C
You1 A
You3_L7_I1000005 A
Ypt566 C
Ypt567 M
Ypt568 C
Ypt569 M
Ypt570 C
Ypt571 C
Ypt572 C
Ypt573 C
Ypt574 C
Ypt575 C
Ypt576 C
Ypt577 C
Ypt578 C
Ypt579 C
Ypt580 M
Ypt581 A
Ypt582 C
Ypt583 C
Ypt584 M
Ypt585 M
Ypt586 C
Ypt587 M
Ypt588 M
Ypt589 A
Ypt590 C
Ypt591 M
Ypt592 A
Ypt593 C
Ypt594 C
Ypt595 M
Ypt596 C
Ypt597 C
Ypt598 M
Ypt599 C
Ypt600 M
Ypt603 M
Ypt606 C
Ypt607 M
Ypt608 C
Ypt622 C
Ypt623 M
Ypt624 M
Ypt626 C
Ypt638 C
Ypt640 M
Ypt642 M
Ypt643 M
Ypt645 M
Ypt646 M
Ypt647 C
Yt516 M
Yt517 M
Yt518 M
Yt519 M
Yt520 M
Yt521 C
Yt522 M
Yt523 C
Yt524 C
Yt525 C
Yt526 M
Yt527 C
Yt528 C
Yt529 C
Yt530 M
Yt531 C
Yt536 C
Yt538 M
Yt539 M
Yt540 C
ZJ1 C
ZJ3 C
ZJ4 C
india3 M
india49 A
production A
yp914ypt M
ypt171_L2_I021 C
ypt173_L2_I022 C
ypt175_L2_I023 M
ypt2043_L1_I037 A
ypt2051_L3_I003 M
ypt2053_L6_I004 M
ypt2063_L6_I005 C
ypt2069_L6_I006 C
ypt2071_L1_I038 M
ypt2082 C
ypt2086 C
ypt2087 M
ypt2091 C
ypt2092 C
ypt2093 A
ypt2094 C
ypt2095 C
ypt2098 M
ypt2100 C
ypt2101 M
ypt2102 M
ypt2103 C
ypt2105 C
ypt2106 A
ypt2108 M
ypt2109 A
ypt2110 C
ypt2111 C
ypt2112 C
ypt2114 C
ypt2115 C
ypt2116 M
ypt2117 M
ypt2118 M
ypt2119 C
ypt2120 M
ypt2121 C
ypt2122 M
ypt2124_L4_I052 C
ypt2127_L1_I036 C
ypt2128_L6_I054 C
ypt2144_L6_I055 A
ypt2145_L6_I056 M
ypt2163 C
ypt2164 C
ypt2165 C
ypt2166 C
ypt2167 C
ypt2168 C
ypt2169 M
ypt2170 C
ypt2171 M
ypt2172 C
ypt2173 C
ypt2174 C
ypt2175 C
ypt2176 A
ypt2177 M
ypt2178 C
ypt217_L2_I024 A
ypt2185 C
ypt2186 A
ypt2187 M
ypt2190 A
ypt2191 C
ypt219_L3_I025 C
ypt2200 C
ypt2201 A
ypt2205 C
ypt2209 C
ypt220_L2_I026 C
ypt2214 C
ypt2215 M
ypt2216 C
ypt2217 C
ypt2218 M
ypt2219 C
ypt221_L3_I042 M
ypt2220 C
ypt2221 C
ypt2222 A
ypt222_L3_I027 A
ypt2437 A
ypt2438 C
ypt2439 M
ypt2440 C
ypt2441 M
ypt2442 M
ypt2443 M
ypt2444 M
ypt2445 C
ypt2446 C
ypt2447 M
ypt2448 C
ypt2449 C
ypt2454 A
ypt2459 A
ypt2468 C
ypt2496 C
ypt2499 M
ypt2500 C
ypt2503 A
ypt2504 A
ypt2507 A
ypt2512 C
ypt2516 C
ypt2521 C
ypt2523 M
ypt2534 M
ypt2541 M
ypt2543 C
ypt2544 C
ypt2545 M
ypt2546 M
ypt2547 C
ypt2552 C
ypt2562 C
ypt2563 M
ypt2569 C
ypt2570 C
ypt2571 M
ypt2572 C
ypt2573 C
ypt2574 C
ypt2575 C
ypt2579 C
ypt258_L3_I028 C
ypt2598 M
ypt259_L2_I029 C
ypt2601 C
ypt2606 C
ypt2608 A
ypt2615 M
ypt2622 M
ypt2623 C
ypt2624 M
ypt2625 A
ypt2627 C
ypt2628 A
ypt2629 M
ypt262_L3_I030 A
ypt2630 C
ypt2636 M
ypt263_L3_I031 C
ypt2640 M
ypt2641 C
ypt2643 C
ypt2644 C
ypt2646 C
ypt264_L3_I032 C
ypt2650 C
ypt2653 M
ypt2656 C
ypt2657 C
ypt2658 C
ypt2661 M
ypt2664 M
ypt2665 C
ypt2669 C
ypt2670 M
ypt2671 M
ypt2672 M
ypt2673 A
ypt2678 C
ypt2706 A
ypt2722 A
ypt2724 A
ypt2729 C
ypt2739 A
ypt2740 C
ypt2745 C
ypt2760 C
ypt2761 M
ypt2765 C
ypt2766 M
ypt2775 M
ypt2780 M
ypt2781 C
ypt2782 C
ypt2783 M
ypt2784 M
ypt2785 C
ypt2786 C
ypt2787 M
ypt2788 C
ypt2789 C
ypt2790 M
ypt2791 C
ypt2792 A
ypt2799 A
ypt2800 C
ypt2808 M
ypt2810 M
ypt2812 A
ypt2813 C
ypt2814 A
ypt2815 A
ypt2816 A
ypt2817 C
ypt2819 C
ypt2821 M
ypt2822 A
ypt2823 A
ypt2824 A
ypt2825 A
ypt2826 M
ypt2827 C
ypt2828 A
ypt2831 A
ypt2832 C
ypt2842 C
ypt2843 C
ypt2849 C
ypt2859 C
ypt2860 C
ypt2861 C
ypt2862 C
ypt2863 C
ypt2870 C
ypt2871 C
ypt2887 C
ypt2888 C
ypt2891_L3_I041 C
ypt2892 C
ypt2893_L3_I025 C
ypt2894 A
ypt2902 C
ypt2909 C
ypt2910 A
ypt2911 C
ypt2912 C
ypt2918 M
ypt2929 M
ypt2930 C
ypt3001 C
ypt3002 C
ypt3003 M
ypt3004 A
ypt3005 C
ypt3006 C
ypt3007 C
ypt3008 M
ypt3009 C
ypt3010 M
ypt3011 C
ypt3012 C
ypt3016 C
ypt3017 C
ypt3028 C
ypt3038 C
ypt3040 A
ypt3041 M
ypt3042 C
ypt3043 C
ypt3044 C
ypt3045 M
ypt3046 C
ypt3047 C
ypt3050 C
ypt3051 M
ypt3052 C
ypt3061 A
ypt3069 M
ypt3072 M
ypt3133 C
ypt3134 A
ypt3135 C
ypt3136 C
ypt3137 C
ypt3138 C
ypt3139 A
ypt3140 C
ypt3141 C
ypt3142 M
ypt3143 C
ypt3145 C
ypt3149_L2_I034 C
ypt3150_L8_I023 C
ypt3159_L6_I035 A
ypt3160_L8_I024 A
ypt3162_L6_I036 M
ypt3179_L8_I025 M
ypt3180 M
ypt3181_L7_I038 C
ypt3182_L1_I039 M
ypt3189_L1_I040 C
ypt3190_L8_I026 C
ypt3191_L2_I041 C
ypt3193_L1_I027 M
ypt3195_L1_I042 M
ypt3196_L2_I043 A
ypt3197_L1_I044 M
ypt3204_L7_I046 C
ypt3205_L2_I047 C
ypt3206_L1_I048 C
ypt3207_L6_I050 C
ypt3210_L6_I051 C
ypt3211_L6_I052 A
ypt3220_L1_I031 C
ypt3221_L1_I032 C
ypt3222_L1_I033 C
ypt3224_L8_I043 C
ypt3225_L2_I053 C
ypt3226_L3_I044 M
ypt3229_L8_I045 C
ypt3238_L3_I046 A
ypt3239_L1_I035 C
ypt3241_L6_I055 C
ypt3243_L8_I047 C
ypt3246_L6_I050 C
ypt3247_L6_I051 C
ypt3257_L1_I056 A
ypt3261_L7_I004 C
ypt3262_L7_I005 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 C
ypt3274A_L7_I011 C
ypt3276_L7_I021 C
ypt3278_L3_I028 C
ypt3289_L8_I021 C
ypt50_L2_I030 A
ypt51_L2_I031 C
ypt53_L2_I032 C
ypt55_L1_I033 C
ypt890 C
ypt891 C
ypt896_L2_I047 C
ypt897_L3_I048 C
ypt898 C
ypt899_L6_I051 C
ypt901_L1_I052 C
ypt902_L1_I053 C
ypt904_L4_I055 C
ypt905_L6_I056 C
ypt906_L3_I001 C
ypt908_L1_I003 C
ypt909_L5_I004 C
ypt910_L3_I005 A
ypt911_L6_I006 C
ypt912 C
ypt915 A
ypt917 M
ypt918_L3_I007 A
ypt919_L4_I008 C
ypt921_L8_I011 M
ypt922_L4_I012 C
ypt923_L2_I051 C
ypt925_L2_I022 C
ypt926_L2_I023 C
ypt929 C
ypt930 C
ypt931 C
ypt932 C
ypt933 C
ypt936 C
ypt939_L5_I025 A
ypt941_L5_I027 C
ypt942_L7_I028 C
ypt943 A
ypt944_L3_I030 M
ypt945_L4_I031 M
ypt946_L4_I032 A
ypt947_L5_I033 A
ypt948_L2_I034 C
ypt949_L3_I035 C
ypt950_L5_I036 C
ypt951 M
ypt952 C
ypt953 C
ypt954 M
ypt955 M
ypt956x C
ypt957 A
ypt958 A
ypt959 C
ypt960 M
ypt961 C
ypt962 M
ypt963 C
ypt964 C
ypt965 C
ypt966 C
ypt971 C
ypt972x C
ypt973_L4_I037 C
ypt974 C
ypt975_L8_I039 C
ypt976_L7_I040 C
ypt977_L2_I041 M
ypt978_L2_I052 A
ypt979_L6_I042 C
ypt980_L3_I043 C
ypt981_L2_I044 M
ypt982_L4_I045 M
ypt984 C
yptwj M
147209 M
147830 A
GLF_denovo C
Gallus_Sonneriatii_d M
Ypt4000 A
Ypt4879 C
Ypt4880 C