ChickenSD

ChickenSD / Individual SNP / ggaS0033001557546

Detail information of ggaS0033001557546

1.General Information

SNP ID: ggaS0033001557546
Organism: Gallus gallus
Individual: 130S_L4_I044

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: T

3.Reference Map information

Chrom Position Reference 130S_L4_I044
chr15 121 C T

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0033001557546 - intergenic_variant => =>

5.Individual Genotype

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Individual Genotype
100S Y
101S_L1_I028 Y
102S_L3_I037 C
103S C
104S_L7_I029 C
105S_L3_I039 Y
106S_L6_I030 Y
107S_L2_I031 C
108S_L6_I032 Y
109S_L5_I033 Y
10S_L1_I052 C
110S_L4_I034 Y
111S_L3_I047 C
112S_L3_I035 C
113S_L1_I036 C
114S_L3_I037 Y
116S_L6_I038 C
117S_L2_I039 Y
119S_L3_I041 C
120S_L1_I041 C
122S_L4_I043 C
124S_L2_I048 C
125S_L3_I050 T
126S_L3_I051 Y
127S_L2_I045 Y
128S_L1_I042 Y
129S_L3_I043 Y
12S_L4_I011 Y
131S_L2_I045 Y
132S_L2_I046 Y
133S_L8_I046 Y
134S_L2_I047 Y
135S_L3_I048 Y
13S_L7_I012 T
14S_L2_I021 Y
15S_L6_I022 C
16S_L5_I023 Y
17S_L3_I024 Y
18833 Y
18S_L7_I025 Y
19297 C
19912 Y
19S_L4_I026 Y
1S C
20736 Y
20S_L7_I027 Y
21S_L6_I028 Y
22S_L6_I029 Y
23S_L2_I030 C
24S_L4_I031 Y
25S_L3_I032 Y
26S C
27S_L4_I034 C
28S_L4_I035 Y
29S_L3_I036 Y
2S C
30S_L2_I037 C
31S_L3_I038 Y
32S_L1_I039 Y
33S Y
35S_L5_I041 C
36S_L5_I042 C
37S_L2_I043 Y
38S_L6_I044 Y
39S_L6_I053 Y
3S_L4_I003 C
40S_L2_I054 C
41S_L5_I045 Y
42S_L3_I055 Y
43S Y
44S_L4_I001 Y
45S_L2_I002 C
46S_L4_I003 C
47S_L3_I046 T
48S_L1_I004 Y
49S_L1_I005 Y
4S_L4_I004 C
50S_L1_I047 C
51S_L6_I048 Y
52S_L2_I050 C
53S_L2_I006 Y
54S_L2_I007 Y
55S_L1_I008 C
56S_L1_I010 Y
57S_L3_I046 Y
58S_L4_I051 Y
59S_L5_I052 Y
5S C
61S_L8_I054 T
62S_L8_I055 C
63S_L5_I056 C
64S_L4_I001 Y
65S_L5_I002 Y
66S_L2_I003 C
67S_L1_I011 Y
68S_L3_I012 Y
69S C
6S C
70S C
71S_L3_I023 C
72S_L1_I024 C
73S_L1_I025 Y
74S_L4_I026 Y
75S_L3_I027 Y
76S_L1_I028 C
77S_L4_I029 Y
78S_L4_I030 C
79S_L2_I031 Y
7S_L4_I007 Y
80S_L3_I004 Y
81S_L1_I005 T
82S C
83S_L3_I033 C
84S_L5_I006 Y
85S_L5_I007 Y
86S_L5_I008 Y
87S_L5_I010 Y
88S_L4_I011 Y
89S_L6_I012 Y
90S_L4_I021 C
91S_L4_I022 C
92S_L5_I023 Y
93S_L7_I024 T
95S_L8_I025 Y
96S_L4_I026 Y
97S_L8_I027 Y
98S_L3_I034 Y
99S_L2_I035 Y
9S Y
A1 Y
A10 Y
A12 C
A14 T
A3 C
A8 Y
BKL2 Y
BLB1_L2_I007 C
BLO2 C
GVF C
India1 C
India11 C
India13 C
India15 C
India17 C
India19 C
India21 C
India23 Y
India25 Y
India27 Y
India29 C
India31 C
India33 C
India35 C
India37 C
India39 C
India41 C
India43 C
India45 C
India47 C
India5 C
India51 Y
India55 Y
India57 C
India59 Y
India61 C
India7 Y
India9 C
L2 C
N1 C
N11 C
N13 T
N18 Y
N5 C
N7 C
N8 C
S-f1_L4_I106 C
S-f3_I108 C
S-f4_L4_I109 Y
S-m1_I101 C
S-m2_I102 C
S-m5_I105 C
S6 C
SAMN02486156 Y
SAMN02486157 Y
SAMN02486158 Y
SAMN02486159 C
SAMN02486160 C
SAMN02486161 Y
SAMN02486162 T
SAMN02486164 Y
SAMN02486165 Y
SAMN02486166 T
SAMN02486167 Y
Silkia Y
T2 Y
T5 C
TD1 T
TD12 C
TD22 C
TD9 T
Tibet C
Xcelris_10 Y
Xcelris_101 C
Xcelris_104 Y
Xcelris_105 Y
Xcelris_10A C
Xcelris_10B C
Xcelris_112 C
Xcelris_113 Y
Xcelris_114 Y
Xcelris_11B Y
Xcelris_12 Y
Xcelris_120 C
Xcelris_127 T
Xcelris_128 Y
Xcelris_129 T
Xcelris_12A Y
Xcelris_13 Y
Xcelris_137 Y
Xcelris_13B Y
Xcelris_14 Y
Xcelris_141 Y
Xcelris_142 C
Xcelris_143 T
Xcelris_144 Y
Xcelris_14A Y
Xcelris_14B C
Xcelris_174 C
Xcelris_175 C
Xcelris_219 Y
Xcelris_221 C
Xcelris_222 C
Xcelris_224 Y
Xcelris_226 Y
Xcelris_227 C
Xcelris_276 C
Xcelris_278 C
Xcelris_279 C
Xcelris_280 Y
Xcelris_282 C
Xcelris_2A C
Xcelris_2B C
Xcelris_331 Y
Xcelris_332 C
Xcelris_333 C
Xcelris_335 Y
Xcelris_336 C
Xcelris_339 Y
Xcelris_340 C
Xcelris_341 Y
Xcelris_377 C
Xcelris_378 Y
Xcelris_379 C
Xcelris_380 C
Xcelris_381 C
Xcelris_382 Y
Xcelris_383 C
Xcelris_384 C
Xcelris_385 T
Xcelris_392 C
Xcelris_394 Y
Xcelris_44 C
Xcelris_4A Y
Xcelris_4B Y
Xcelris_5 C
Xcelris_5A Y
Xcelris_5B T
Xcelris_67 Y
Xcelris_6A C
Xcelris_7 C
Xcelris_77 Y
Xcelris_8 Y
Xcelris_84 C
Xcelris_8B C
Xcelris_90 C
Xcelris_97 C
Xcelris_98 Y
Xcelris_MT-134 Y
Xcelris_MT-18 Y
Xcelris_MT-38 Y
Xcelris_MT-48 C
Xcelris_MT-6 T
Xcelris_MT-85 Y
Y1-f1_L5_I119 Y
Y1-f2_L6_I121 C
Y1-f3_L7_I101 T
Y1-m3_L7_I123 C
Y1-m4_I124 Y
Y1-m5_L7_I102 Y
YPt565 Y
YPt601 Y
YPt604 C
YPt609 C
YPt610 C
YPt637 Y
YPt641 Y
YPt648 Y
You1 Y
You3_L7_I1000005 Y
Ypt566 Y
Ypt567 Y
Ypt568 Y
Ypt569 Y
Ypt570 C
Ypt573 C
Ypt574 C
Ypt575 C
Ypt576 C
Ypt577 Y
Ypt578 Y
Ypt579 Y
Ypt580 Y
Ypt582 C
Ypt583 Y
Ypt584 C
Ypt585 C
Ypt586 Y
Ypt587 C
Ypt588 Y
Ypt589 Y
Ypt590 Y
Ypt591 Y
Ypt592 C
Ypt593 T
Ypt594 Y
Ypt595 C
Ypt596 C
Ypt597 C
Ypt598 Y
Ypt599 Y
Ypt600 Y
Ypt602 C
Ypt603 Y
Ypt606 Y
Ypt607 Y
Ypt608 Y
Ypt622 C
Ypt623 Y
Ypt624 C
Ypt626 Y
Ypt638 Y
Ypt640 Y
Ypt642 T
Ypt643 Y
Ypt645 Y
Ypt646 C
Ypt647 C
Yt516 Y
Yt517 C
Yt518 C
Yt519 C
Yt520 Y
Yt521 C
Yt522 C
Yt523 C
Yt524 Y
Yt525 Y
Yt526 C
Yt527 C
Yt528 Y
Yt529 C
Yt530 C
Yt531 Y
Yt536 C
Yt538 C
Yt539 C
Yt540 C
ZJ1 Y
ZJ2 Y
ZJ3 Y
ZJ4 C
india3 T
production C
yp914ypt Y
ypt169_L3_I011 C
ypt170_L2_I012 C
ypt171_L2_I021 C
ypt173_L2_I022 Y
ypt175_L2_I023 C
ypt2041_L6_I002 C
ypt2043_L1_I037 Y
ypt2051_L3_I003 Y
ypt2063_L6_I005 T
ypt2069_L6_I006 T
ypt2071_L1_I038 Y
ypt2082 Y
ypt2086 Y
ypt2087 Y
ypt2091 C
ypt2092 Y
ypt2093 Y
ypt2094 Y
ypt2095 C
ypt2098 Y
ypt2100 Y
ypt2101 C
ypt2102 Y
ypt2103 Y
ypt2105 Y
ypt2106 Y
ypt2107 Y
ypt2108 Y
ypt2109 Y
ypt2110 C
ypt2111 C
ypt2112 Y
ypt2114 Y
ypt2115 Y
ypt2116 Y
ypt2117 C
ypt2118 Y
ypt2119 C
ypt2120 C
ypt2121 Y
ypt2122 C
ypt2124_L4_I052 Y
ypt2126_L3_I053 C
ypt2127_L1_I036 Y
ypt2128_L6_I054 Y
ypt2144_L6_I055 Y
ypt2145_L6_I056 C
ypt2146_L6_I001 C
ypt2163 Y
ypt2164 Y
ypt2165 C
ypt2166 Y
ypt2167 Y
ypt2168 Y
ypt2169 C
ypt2170 C
ypt2171 Y
ypt2173 C
ypt2174 C
ypt2175 Y
ypt2176 C
ypt2177 T
ypt2178 C
ypt217_L2_I024 C
ypt2184 Y
ypt2185 Y
ypt2187 C
ypt2189 T
ypt2190 C
ypt2191 Y
ypt219_L3_I025 C
ypt2200 C
ypt2201 C
ypt2205 T
ypt2209 C
ypt220_L2_I026 C
ypt2214 C
ypt2215 C
ypt2216 C
ypt2217 C
ypt2218 C
ypt2219 Y
ypt221_L3_I042 Y
ypt2220 Y
ypt2221 C
ypt2222 C
ypt222_L3_I027 C
ypt2437 Y
ypt2438 Y
ypt2439 C
ypt2440 Y
ypt2441 Y
ypt2442 C
ypt2443 Y
ypt2444 C
ypt2445 C
ypt2446 C
ypt2447 Y
ypt2448 C
ypt2449 Y
ypt2459 C
ypt2496 C
ypt2498 C
ypt2500 C
ypt2503 T
ypt2504 Y
ypt2507 Y
ypt2512 Y
ypt2516 Y
ypt2521 Y
ypt2523 Y
ypt2534 Y
ypt2541 Y
ypt2543 Y
ypt2544 Y
ypt2545 Y
ypt2546 T
ypt2547 Y
ypt2552 C
ypt2562 Y
ypt2563 Y
ypt2569 Y
ypt2570 Y
ypt2571 C
ypt2572 Y
ypt2573 Y
ypt2574 C
ypt2575 Y
ypt2579 Y
ypt258_L3_I028 Y
ypt2598 Y
ypt259_L2_I029 C
ypt2601 Y
ypt2606 Y
ypt2608 C
ypt2615 C
ypt2622 Y
ypt2623 Y
ypt2624 C
ypt2625 C
ypt2627 Y
ypt2628 Y
ypt2629 Y
ypt262_L3_I030 C
ypt2630 C
ypt2636 Y
ypt2638 Y
ypt263_L3_I031 Y
ypt2640 C
ypt2641 C
ypt2643 Y
ypt2644 Y
ypt2646 Y
ypt264_L3_I032 Y
ypt2650 C
ypt2653 C
ypt2656 T
ypt2657 Y
ypt2658 Y
ypt2661 C
ypt2664 C
ypt2665 Y
ypt2669 C
ypt2670 Y
ypt2671 Y
ypt2672 C
ypt2673 Y
ypt2678 Y
ypt2706 Y
ypt2722 Y
ypt2724 C
ypt2733 T
ypt2739 C
ypt2740 C
ypt2745 Y
ypt2746 Y
ypt2760 C
ypt2761 Y
ypt2765 Y
ypt2766 C
ypt2775 C
ypt2780 C
ypt2781 C
ypt2782 C
ypt2783 Y
ypt2784 Y
ypt2785 Y
ypt2786 C
ypt2787 Y
ypt2788 C
ypt2789 Y
ypt2790 Y
ypt2791 Y
ypt2792 T
ypt2799 C
ypt2800 C
ypt2808 Y
ypt2810 Y
ypt2812 Y
ypt2813 Y
ypt2814 Y
ypt2815 Y
ypt2816 C
ypt2817 C
ypt2819 Y
ypt2821 T
ypt2822 Y
ypt2823 Y
ypt2824 Y
ypt2825 Y
ypt2826 Y
ypt2827 Y
ypt2828 Y
ypt2831 Y
ypt2832 C
ypt2842 T
ypt2843 C
ypt2849 Y
ypt2859 Y
ypt2860 C
ypt2871 C
ypt2891_L3_I041 C
ypt2892 C
ypt2893_L3_I025 C
ypt2894 C
ypt2895_L3_I026 C
ypt2902 C
ypt2909 C
ypt2910 C
ypt2911 Y
ypt2912 Y
ypt2918 Y
ypt2929 C
ypt2930 C
ypt3001 C
ypt3002 C
ypt3003 C
ypt3004 C
ypt3005 C
ypt3006 C
ypt3007 C
ypt3008 C
ypt3009 C
ypt3010 Y
ypt3011 Y
ypt3012 C
ypt3016 Y
ypt3017 C
ypt3028 Y
ypt3038 C
ypt3040 C
ypt3041 C
ypt3042 C
ypt3043 T
ypt3044 Y
ypt3046 C
ypt3047 C
ypt3050 C
ypt3051 C
ypt3061 C
ypt3069 Y
ypt3072 C
ypt3133 C
ypt3136 C
ypt3137 C
ypt3138 Y
ypt3139 Y
ypt3140 Y
ypt3141 C
ypt3142 C
ypt3143 Y
ypt3144_L3_I039 T
ypt3146 Y
ypt3149_L2_I034 Y
ypt3150_L8_I023 T
ypt3159_L6_I035 Y
ypt3160_L8_I024 Y
ypt3162_L6_I036 Y
ypt3180 C
ypt3181_L7_I038 T
ypt3182_L1_I039 C
ypt3190_L8_I026 C
ypt3196_L2_I043 T
ypt3197_L1_I044 C
ypt3198_L2_I045 Y
ypt3204_L7_I046 C
ypt3205_L2_I047 Y
ypt3206_L1_I048 Y
ypt3207_L6_I050 C
ypt3210_L6_I051 C
ypt3211_L6_I052 C
ypt3212_L4_I028 Y
ypt3213_L8_I029 Y
ypt3219_L1_I030 Y
ypt3220_L1_I031 Y
ypt3221_L1_I032 C
ypt3222_L1_I033 T
ypt3224_L8_I043 Y
ypt3225_L2_I053 T
ypt3226_L3_I044 Y
ypt3228-7_L1_I034 Y
ypt3229_L8_I045 Y
ypt3238_L3_I046 Y
ypt3239_L1_I035 Y
ypt3240_L6_I054 Y
ypt3241_L6_I055 C
ypt3243_L8_I047 T
ypt3245 Y
ypt3246_L6_I050 Y
ypt3247_L6_I051 C
ypt3257_L1_I056 C
ypt3258_L3_I001 C
ypt3262_L7_I005 Y
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 Y
ypt3272_L7_I010 Y
ypt3274A_L7_I011 C
ypt3276_L7_I021 C
ypt3277_L6_I027 C
ypt3278_L3_I028 C
ypt3289_L8_I021 Y
ypt4001 C
ypt47_L2_I029 C
ypt50_L2_I030 C
ypt53_L2_I032 Y
ypt55_L1_I033 C
ypt890 C
ypt891 Y
ypt896_L2_I047 C
ypt897_L3_I048 Y
ypt898 C
ypt899_L6_I051 Y
ypt901_L1_I052 C
ypt902_L1_I053 Y
ypt903_L2_I054 C
ypt904_L4_I055 C
ypt905_L6_I056 C
ypt906_L3_I001 Y
ypt907_L6_I002 C
ypt908_L1_I003 C
ypt909_L5_I004 T
ypt910_L3_I005 C
ypt911_L6_I006 Y
ypt912 C
ypt913 Y
ypt915 Y
ypt916 C
ypt917 Y
ypt918_L3_I007 T
ypt919_L4_I008 Y
ypt920_L5_I010 C
ypt922_L4_I012 C
ypt923_L2_I051 Y
ypt924_L3_I021 Y
ypt925_L2_I022 C
ypt928 C
ypt929 C
ypt930 C
ypt931 Y
ypt932 Y
ypt933 Y
ypt934x Y
ypt936 C
ypt937 T
ypt938x Y
ypt941_L5_I027 Y
ypt942_L7_I028 C
ypt943 T
ypt946_L4_I032 C
ypt947_L5_I033 Y
ypt948_L2_I034 Y
ypt949_L3_I035 Y
ypt950_L5_I036 Y
ypt951 C
ypt952 C
ypt953 C
ypt954 Y
ypt955 Y
ypt956x Y
ypt957 Y
ypt958 Y
ypt959 Y
ypt960 Y
ypt961 Y
ypt962 Y
ypt963 C
ypt966 C
ypt971 C
ypt972x C
ypt973_L4_I037 C
ypt974 Y
ypt975_L8_I039 Y
ypt976_L7_I040 Y
ypt977_L2_I041 Y
ypt979_L6_I042 C
ypt980_L3_I043 Y
ypt981_L2_I044 C
ypt982_L4_I045 C
ypt984 Y
yptwj C
147209 Y
147830 Y
GLF_denovo Y
Gallus_Sonneriatii_d Y
Ypt4000 C
Ypt4879 T
Ypt4880 Y