ChickenSD

ChickenSD / Individual SNP / ggaS0031002456077

Detail information of ggaS0031002456077

1.General Information

SNP ID: ggaS0031002456077
Organism: Gallus gallus
Individual: 129S_L3_I043

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: T

3.Reference Map information

Chrom Position Reference 129S_L3_I043
chr26 1548 C T

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0031002456077 - intergenic_variant => =>

5.Individual Genotype

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Individual Genotype
100S Y
101S_L1_I028 Y
102S_L3_I037 Y
103S Y
104S_L7_I029 C
105S_L3_I039 C
106S_L6_I030 C
107S_L2_I031 C
108S_L6_I032 Y
109S_L5_I033 Y
10S_L1_I052 C
110S_L4_I034 C
111S_L3_I047 C
112S_L3_I035 Y
113S_L1_I036 Y
114S_L3_I037 Y
116S_L6_I038 C
117S_L2_I039 C
118S_L4_I040 C
119S_L3_I041 Y
11S C
120S_L1_I041 Y
121S_L3_I042 Y
122S_L4_I043 Y
123S_L4_I044 Y
124S_L2_I048 Y
125S_L3_I050 C
126S_L3_I051 Y
127S_L2_I045 C
128S_L1_I042 C
12S_L4_I011 C
130S_L4_I044 C
131S_L2_I045 C
132S_L2_I046 Y
133S_L8_I046 Y
134S_L2_I047 Y
135S_L3_I048 C
13S_L7_I012 Y
14S_L2_I021 Y
15S_L6_I022 Y
16S_L5_I023 Y
17S_L3_I024 C
18833 C
18S_L7_I025 Y
19297 C
19912 C
19S_L4_I026 Y
1S C
20736 C
20S_L7_I027 Y
21S_L6_I028 C
22S_L6_I029 Y
23S_L2_I030 C
24S_L4_I031 Y
25S_L3_I032 C
26S Y
27S_L4_I034 Y
28S_L4_I035 Y
29S_L3_I036 C
2S Y
30S_L2_I037 C
31S_L3_I038 Y
32S_L1_I039 Y
33S C
35S_L5_I041 Y
36S_L5_I042 Y
37S_L2_I043 C
38S_L6_I044 C
39S_L6_I053 Y
3S_L4_I003 C
40S_L2_I054 Y
41S_L5_I045 C
42S_L3_I055 Y
43S Y
44S_L4_I001 C
45S_L2_I002 Y
46S_L4_I003 Y
47S_L3_I046 C
48S_L1_I004 C
49S_L1_I005 C
4S_L4_I004 C
50S_L1_I047 C
52S_L2_I050 C
53S_L2_I006 C
54S_L2_I007 C
55S_L1_I008 Y
56S_L1_I010 C
57S_L3_I046 Y
58S_L4_I051 Y
59S_L5_I052 Y
5S Y
60S_L5_I053 Y
61S_L8_I054 Y
62S_L8_I055 C
63S_L5_I056 Y
64S_L4_I001 C
65S_L5_I002 Y
66S_L2_I003 C
67S_L1_I011 Y
68S_L3_I012 Y
69S Y
6S C
70S Y
71S_L3_I023 Y
72S_L1_I024 Y
73S_L1_I025 Y
74S_L4_I026 C
75S_L3_I027 C
76S_L1_I028 C
77S_L4_I029 C
78S_L4_I030 C
79S_L2_I031 Y
7S_L4_I007 C
80S_L3_I004 Y
81S_L1_I005 C
82S Y
83S_L3_I033 C
84S_L5_I006 C
85S_L5_I007 C
86S_L5_I008 C
87S_L5_I010 Y
88S_L4_I011 Y
89S_L6_I012 C
90S_L4_I021 C
91S_L4_I022 C
92S_L5_I023 Y
93S_L7_I024 Y
95S_L8_I025 C
96S_L4_I026 C
97S_L8_I027 Y
98S_L3_I034 C
99S_L2_I035 C
9S C
A1 C
A10 C
A12 Y
A14 C
A3 C
A8 C
BKL2 Y
BLB1_L2_I007 Y
BLB2_L2_I008 C
BLO1 Y
BLO11 Y
BLO15 C
BLO2 Y
BLO3_L4_I022 Y
BOJA2 Y
BYW3_L3_I033 C
BYW5_L2_I010 Y
GVF Y
India1 C
India11 Y
India13 C
India15 C
India17 Y
India19 C
India21 C
India23 Y
India25 Y
India27 C
India29 C
India31 C
India33 C
India37 Y
India39 Y
India41 Y
India43 C
India45 C
India47 Y
India5 Y
India51 C
India55 Y
India57 Y
India59 C
India61 Y
India7 C
India9 Y
L2 C
N1 Y
N11 C
N13 Y
N18 Y
N3 C
N5 C
N7 Y
N8 C
S-f1_L4_I106 C
S-f2_I107 Y
S-f3_I108 C
S-f4_L4_I109 C
S-m1_I101 C
S-m2_I102 Y
S-m3_I103 C
S-m4_L2_I104 C
S-m5_I105 C
S6 C
SAMN02486156 C
SAMN02486157 C
SAMN02486158 C
SAMN02486159 C
SAMN02486160 Y
SAMN02486161 Y
SAMN02486162 C
SAMN02486163 Y
SAMN02486164 C
SAMN02486165 Y
SAMN02486166 Y
SAMN02486167 C
Silkia C
T2 C
T3 C
T5 C
TD1 Y
TD12 C
TD15 C
TD22 C
TD27 C
TD30 C
TD6 Y
TD9 Y
Tibet C
Xcelris_10 T
Xcelris_101 C
Xcelris_104 C
Xcelris_105 Y
Xcelris_10A Y
Xcelris_10B C
Xcelris_112 C
Xcelris_114 C
Xcelris_11B Y
Xcelris_12 C
Xcelris_120 Y
Xcelris_127 C
Xcelris_128 C
Xcelris_129 C
Xcelris_12A C
Xcelris_13 C
Xcelris_137 C
Xcelris_13B C
Xcelris_14 C
Xcelris_141 C
Xcelris_14A C
Xcelris_14B C
Xcelris_174 C
Xcelris_175 C
Xcelris_176 C
Xcelris_1B C
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 Y
Xcelris_227 C
Xcelris_276 C
Xcelris_278 C
Xcelris_279 C
Xcelris_280 C
Xcelris_282 C
Xcelris_2A C
Xcelris_2B T
Xcelris_331 C
Xcelris_332 Y
Xcelris_333 C
Xcelris_335 C
Xcelris_336 C
Xcelris_339 C
Xcelris_340 C
Xcelris_341 C
Xcelris_377 C
Xcelris_378 C
Xcelris_379 Y
Xcelris_380 C
Xcelris_382 C
Xcelris_383 C
Xcelris_384 C
Xcelris_385 C
Xcelris_392 C
Xcelris_4B C
Xcelris_5A C
Xcelris_67 C
Xcelris_6A C
Xcelris_6B C
Xcelris_7 C
Xcelris_77 C
Xcelris_8 C
Xcelris_84 Y
Xcelris_8A C
Xcelris_8B Y
Xcelris_90 C
Xcelris_97 T
Xcelris_98 C
Xcelris_MT-134 C
Xcelris_MT-48 C
Xcelris_MT-9 C
Xcelris_MT-99 C
Y1-f1_L5_I119 C
Y1-f2_L6_I121 C
Y1-f3_L7_I101 C
Y1-m1_L6_I120 C
Y1-m2_L4_I122 C
Y1-m3_L7_I123 C
Y1-m4_I124 C
Y1-m5_L7_I102 C
YPt565 C
YPt601 C
YPt604 C
YPt609 C
YPt610 C
YPt637 C
YPt641 C
YPt648 Y
You1 Y
You3_L7_I1000005 C
Ypt566 C
Ypt567 C
Ypt568 C
Ypt569 C
Ypt570 C
Ypt571 C
Ypt572 C
Ypt573 Y
Ypt574 C
Ypt575 C
Ypt576 C
Ypt577 C
Ypt578 C
Ypt579 C
Ypt580 C
Ypt581 C
Ypt582 C
Ypt583 Y
Ypt584 C
Ypt585 C
Ypt586 C
Ypt587 C
Ypt588 C
Ypt589 C
Ypt590 C
Ypt591 C
Ypt592 C
Ypt593 C
Ypt594 C
Ypt595 C
Ypt596 C
Ypt597 C
Ypt598 C
Ypt599 C
Ypt600 C
Ypt602 C
Ypt603 C
Ypt606 C
Ypt607 C
Ypt608 C
Ypt622 C
Ypt623 Y
Ypt624 Y
Ypt626 C
Ypt638 C
Ypt640 C
Ypt642 C
Ypt643 C
Ypt645 C
Ypt646 C
Ypt647 C
Yt516 C
Yt517 C
Yt518 C
Yt519 C
Yt520 C
Yt521 C
Yt522 C
Yt523 Y
Yt524 C
Yt525 C
Yt526 C
Yt527 C
Yt528 C
Yt529 C
Yt530 C
Yt531 C
Yt536 C
Yt538 Y
Yt539 C
Yt540 C
ZJ1 C
ZJ2 Y
ZJ3 C
ZJ4 C
india3 Y
india49 C
production C
yp914ypt C
ypt169_L3_I011 C
ypt170_L2_I012 Y
ypt171_L2_I021 C
ypt173_L2_I022 C
ypt175_L2_I023 C
ypt2041_L6_I002 C
ypt2043_L1_I037 C
ypt2051_L3_I003 C
ypt2053_L6_I004 C
ypt2063_L6_I005 C
ypt2069_L6_I006 Y
ypt2071_L1_I038 C
ypt2082 C
ypt2086 Y
ypt2087 Y
ypt2091 Y
ypt2092 Y
ypt2093 C
ypt2094 Y
ypt2095 Y
ypt2098 Y
ypt2100 Y
ypt2101 C
ypt2102 C
ypt2103 Y
ypt2105 Y
ypt2106 C
ypt2107 C
ypt2108 Y
ypt2109 Y
ypt2110 C
ypt2111 C
ypt2112 C
ypt2114 Y
ypt2115 T
ypt2116 Y
ypt2117 C
ypt2118 Y
ypt2119 C
ypt2120 C
ypt2121 C
ypt2122 C
ypt2124_L4_I052 Y
ypt2126_L3_I053 C
ypt2127_L1_I036 C
ypt2128_L6_I054 Y
ypt2144_L6_I055 C
ypt2145_L6_I056 C
ypt2146_L6_I001 C
ypt2163 Y
ypt2164 Y
ypt2165 C
ypt2166 Y
ypt2167 C
ypt2168 Y
ypt2169 Y
ypt2170 C
ypt2171 Y
ypt2172 C
ypt2173 Y
ypt2174 C
ypt2175 C
ypt2176 C
ypt2177 Y
ypt2178 C
ypt217_L2_I024 Y
ypt2184 Y
ypt2185 C
ypt2186 Y
ypt2187 Y
ypt2189 Y
ypt2190 C
ypt2191 C
ypt219_L3_I025 C
ypt2200 Y
ypt2201 C
ypt2205 C
ypt2209 C
ypt220_L2_I026 C
ypt2214 C
ypt2215 C
ypt2216 Y
ypt2217 C
ypt2218 C
ypt2219 Y
ypt221_L3_I042 Y
ypt2220 Y
ypt2221 Y
ypt2222 Y
ypt222_L3_I027 C
ypt2437 C
ypt2438 C
ypt2439 C
ypt2440 Y
ypt2441 Y
ypt2442 C
ypt2443 C
ypt2444 C
ypt2445 Y
ypt2446 Y
ypt2447 Y
ypt2448 C
ypt2449 C
ypt2454 C
ypt2459 Y
ypt2468 C
ypt2496 Y
ypt2497 Y
ypt2498 Y
ypt2499 Y
ypt2500 Y
ypt2503 C
ypt2504 Y
ypt2507 C
ypt2512 C
ypt2516 C
ypt2521 C
ypt2523 C
ypt2534 C
ypt2541 Y
ypt2543 Y
ypt2544 Y
ypt2545 C
ypt2546 Y
ypt2547 Y
ypt2552 Y
ypt2562 Y
ypt2563 C
ypt2569 C
ypt2570 Y
ypt2571 C
ypt2572 C
ypt2573 Y
ypt2574 C
ypt2575 C
ypt2579 Y
ypt258_L3_I028 C
ypt2598 Y
ypt259_L2_I029 C
ypt2601 Y
ypt2606 C
ypt2608 Y
ypt2615 Y
ypt2622 Y
ypt2623 C
ypt2624 Y
ypt2625 C
ypt2627 Y
ypt2628 Y
ypt2629 C
ypt262_L3_I030 Y
ypt2630 Y
ypt2636 C
ypt2638 C
ypt263_L3_I031 Y
ypt2640 C
ypt2641 Y
ypt2643 C
ypt2644 Y
ypt2646 Y
ypt264_L3_I032 C
ypt2650 Y
ypt2653 Y
ypt2656 C
ypt2657 C
ypt2658 C
ypt2661 C
ypt2664 C
ypt2669 C
ypt2670 C
ypt2671 C
ypt2672 Y
ypt2673 C
ypt2678 Y
ypt2706 Y
ypt2722 Y
ypt2724 Y
ypt2729 Y
ypt2733 Y
ypt2739 C
ypt2740 Y
ypt2745 C
ypt2746 Y
ypt2760 C
ypt2761 Y
ypt2765 Y
ypt2766 Y
ypt2775 C
ypt2780 Y
ypt2781 Y
ypt2782 Y
ypt2783 Y
ypt2784 C
ypt2785 C
ypt2786 C
ypt2787 C
ypt2788 C
ypt2789 Y
ypt2790 C
ypt2791 Y
ypt2792 C
ypt2799 Y
ypt2800 C
ypt2808 C
ypt2810 C
ypt2812 C
ypt2813 Y
ypt2814 Y
ypt2815 C
ypt2816 C
ypt2817 C
ypt2819 Y
ypt2821 Y
ypt2822 C
ypt2823 C
ypt2824 Y
ypt2825 C
ypt2826 C
ypt2827 C
ypt2828 C
ypt2831 C
ypt2832 Y
ypt2842 C
ypt2843 C
ypt2849 C
ypt2859 Y
ypt2860 Y
ypt2861 C
ypt2862 Y
ypt2863 Y
ypt2870 C
ypt2871 Y
ypt2887 Y
ypt2888 Y
ypt2889 C
ypt2890_L3_I040 Y
ypt2891_L3_I041 Y
ypt2892 C
ypt2893_L3_I025 Y
ypt2894 C
ypt2895_L3_I026 C
ypt2902 Y
ypt2909 C
ypt2910 C
ypt2911 Y
ypt2912 Y
ypt2918 C
ypt2929 C
ypt2930 C
ypt3001 C
ypt3003 Y
ypt3004 Y
ypt3005 Y
ypt3006 C
ypt3007 C
ypt3008 Y
ypt3009 Y
ypt3010 C
ypt3011 Y
ypt3012 Y
ypt3016 C
ypt3017 Y
ypt3028 C
ypt3038 Y
ypt3040 C
ypt3041 Y
ypt3042 C
ypt3043 Y
ypt3044 Y
ypt3045 C
ypt3046 C
ypt3047 Y
ypt3050 C
ypt3051 C
ypt3052 Y
ypt3061 C
ypt3069 C
ypt3072 C
ypt3133 Y
ypt3134 C
ypt3135 C
ypt3136 C
ypt3137 C
ypt3138 C
ypt3139 C
ypt3140 C
ypt3141 C
ypt3142 Y
ypt3143 Y
ypt3144_L3_I039 C
ypt3145 Y
ypt3146 C
ypt3149_L2_I034 Y
ypt3150_L8_I023 Y
ypt3159_L6_I035 C
ypt3160_L8_I024 C
ypt3162_L6_I036 C
ypt3179_L8_I025 C
ypt3180 C
ypt3181_L7_I038 Y
ypt3182_L1_I039 C
ypt3189_L1_I040 C
ypt3190_L8_I026 C
ypt3191_L2_I041 C
ypt3193_L1_I027 C
ypt3195_L1_I042 Y
ypt3196_L2_I043 Y
ypt3197_L1_I044 C
ypt3198_L2_I045 T
ypt3204_L7_I046 C
ypt3205_L2_I047 C
ypt3206_L1_I048 Y
ypt3207_L6_I050 Y
ypt3210_L6_I051 C
ypt3211_L6_I052 C
ypt3213_L8_I029 C
ypt3219_L1_I030 Y
ypt3220_L1_I031 C
ypt3221_L1_I032 Y
ypt3222_L1_I033 C
ypt3224_L8_I043 C
ypt3225_L2_I053 C
ypt3226_L3_I044 C
ypt3228-7_L1_I034 C
ypt3229_L8_I045 C
ypt3238_L3_I046 C
ypt3239_L1_I035 C
ypt3240_L6_I054 C
ypt3246_L6_I050 C
ypt3247_L6_I051 C
ypt3257_L1_I056 C
ypt3258_L3_I001 C
ypt3259_L6_I002 C
ypt3261_L7_I004 C
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 Y
ypt3274A_L7_I011 C
ypt3276_L7_I021 C
ypt3277_L6_I027 C
ypt3278_L3_I028 C
ypt3289_L8_I021 C
ypt4001 C
ypt47_L2_I029 C
ypt50_L2_I030 T
ypt53_L2_I032 C
ypt55_L1_I033 Y
ypt890 C
ypt891 C
ypt896_L2_I047 C
ypt897_L3_I048 C
ypt898 C
ypt899_L6_I051 C
ypt901_L1_I052 C
ypt902_L1_I053 C
ypt903_L2_I054 Y
ypt904_L4_I055 C
ypt906_L3_I001 C
ypt907_L6_I002 C
ypt908_L1_I003 C
ypt909_L5_I004 C
ypt910_L3_I005 C
ypt915 C
ypt917 C
ypt919_L4_I008 C
ypt920_L5_I010 C
ypt921_L8_I011 C
ypt922_L4_I012 C
ypt923_L2_I051 C
ypt924_L3_I021 C
ypt925_L2_I022 Y
ypt926_L2_I023 C
ypt928 Y
ypt929 C
ypt930 T
ypt931 C
ypt932 C
ypt936 C
ypt939_L5_I025 C
ypt940_L4_I026 C
ypt941_L5_I027 C
ypt942_L7_I028 C
ypt943 C
ypt944_L3_I030 C
ypt945_L4_I031 C
ypt946_L4_I032 C
ypt947_L5_I033 C
ypt948_L2_I034 C
ypt949_L3_I035 C
ypt950_L5_I036 C
ypt951 C
ypt952 C
ypt953 C
ypt954 C
ypt955 C
ypt956x Y
ypt957 Y
ypt958 C
ypt959 C
ypt960 C
ypt961 C
ypt962 C
ypt963 C
ypt964 C
ypt965 C
ypt966 Y
ypt971 C
ypt972x C
ypt973_L4_I037 C
ypt974 C
ypt975_L8_I039 C
ypt976_L7_I040 C
ypt977_L2_I041 C
ypt978_L2_I052 C
ypt979_L6_I042 C
ypt980_L3_I043 Y
ypt981_L2_I044 C
ypt982_L4_I045 C
ypt984 C
yptwj C
147209 C
147830 C
GLF_denovo C
Gallus_Sonneriatii_d C
Ypt4000 C
Ypt4879 C
Ypt4880 C