ChickenSD

ChickenSD / Individual SNP / ggaS0026003493110

Detail information of ggaS0026003493110

1.General Information

SNP ID: ggaS0026003493110
Organism: Gallus gallus
Individual: 124S_L2_I048

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: G

3.Reference Map information

Chrom Position Reference 124S_L2_I048
chr5 1646 A G

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0026003493110 ENSGALG00000024035 - upstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S R
101S_L1_I028 A
102S_L3_I037 G
103S A
104S_L7_I029 A
105S_L3_I039 A
106S_L6_I030 R
107S_L2_I031 A
108S_L6_I032 G
109S_L5_I033 A
10S_L1_I052 A
110S_L4_I034 A
111S_L3_I047 A
112S_L3_I035 A
113S_L1_I036 A
114S_L3_I037 A
116S_L6_I038 A
117S_L2_I039 R
118S_L4_I040 A
119S_L3_I041 A
11S A
120S_L1_I041 A
121S_L3_I042 A
122S_L4_I043 A
123S_L4_I044 A
125S_L3_I050 A
126S_L3_I051 A
127S_L2_I045 G
128S_L1_I042 A
129S_L3_I043 A
12S_L4_I011 A
130S_L4_I044 A
131S_L2_I045 A
132S_L2_I046 A
133S_L8_I046 A
134S_L2_I047 A
135S_L3_I048 A
13S_L7_I012 A
14S_L2_I021 A
15S_L6_I022 A
16S_L5_I023 A
17S_L3_I024 A
18833 A
18S_L7_I025 A
19297 G
19912 R
19S_L4_I026 A
1S A
20736 A
20S_L7_I027 G
21S_L6_I028 R
22S_L6_I029 A
23S_L2_I030 A
24S_L4_I031 A
25S_L3_I032 A
26S A
27S_L4_I034 A
28S_L4_I035 A
29S_L3_I036 A
2S A
30S_L2_I037 A
31S_L3_I038 R
32S_L1_I039 A
33S R
35S_L5_I041 R
36S_L5_I042 R
37S_L2_I043 A
38S_L6_I044 A
39S_L6_I053 A
3S_L4_I003 A
40S_L2_I054 A
41S_L5_I045 A
42S_L3_I055 R
43S R
44S_L4_I001 R
45S_L2_I002 R
46S_L4_I003 A
47S_L3_I046 A
48S_L1_I004 A
49S_L1_I005 A
4S_L4_I004 A
50S_L1_I047 A
51S_L6_I048 G
52S_L2_I050 A
53S_L2_I006 G
54S_L2_I007 R
55S_L1_I008 A
56S_L1_I010 A
57S_L3_I046 A
58S_L4_I051 A
59S_L5_I052 A
5S A
60S_L5_I053 A
61S_L8_I054 A
62S_L8_I055 A
63S_L5_I056 A
64S_L4_I001 A
65S_L5_I002 R
66S_L2_I003 A
67S_L1_I011 A
68S_L3_I012 R
69S R
6S A
70S G
71S_L3_I023 R
72S_L1_I024 A
73S_L1_I025 A
74S_L4_I026 A
75S_L3_I027 A
76S_L1_I028 A
77S_L4_I029 A
78S_L4_I030 A
79S_L2_I031 A
7S_L4_I007 A
80S_L3_I004 A
81S_L1_I005 A
82S A
83S_L3_I033 A
84S_L5_I006 A
85S_L5_I007 A
86S_L5_I008 A
87S_L5_I010 A
88S_L4_I011 A
89S_L6_I012 A
90S_L4_I021 A
91S_L4_I022 A
92S_L5_I023 A
93S_L7_I024 A
95S_L8_I025 A
96S_L4_I026 A
97S_L8_I027 A
98S_L3_I034 A
99S_L2_I035 A
9S A
A1 A
A10 R
A12 A
A14 R
A3 R
A8 A
BKL2 A
BLB1_L2_I007 A
BLB2_L2_I008 A
BLO1 A
BLO11 A
BLO15 A
BLO2 A
BLO3_L4_I022 A
BOJA2 A
BYW3_L3_I033 A
BYW5_L2_I010 A
GVF A
India1 A
India11 A
India13 R
India15 A
India17 A
India19 R
India21 A
India23 A
India25 A
India27 A
India29 R
India31 A
India33 A
India35 A
India37 R
India39 A
India41 A
India43 A
India45 A
India47 A
India5 A
India51 A
India55 A
India57 A
India59 R
India61 R
India7 A
India9 R
L2 A
N1 R
N11 G
N13 G
N18 A
N3 R
N5 G
N7 G
N8 G
S-f1_L4_I106 G
S-f2_I107 A
S-f3_I108 R
S-f4_L4_I109 R
S-m1_I101 A
S-m2_I102 G
S-m3_I103 A
S-m4_L2_I104 R
S-m5_I105 G
S6 R
SAMN02486156 A
SAMN02486157 R
SAMN02486158 A
SAMN02486159 A
SAMN02486160 R
SAMN02486161 A
SAMN02486162 G
SAMN02486163 R
SAMN02486164 A
SAMN02486165 R
SAMN02486166 A
SAMN02486167 A
Silkia A
T2 G
T3 G
T5 R
TD1 R
TD12 A
TD15 R
TD22 A
TD27 G
TD30 A
TD6 A
TD9 A
Tibet G
Xcelris_101 A
Xcelris_104 A
Xcelris_105 A
Xcelris_10A A
Xcelris_10B R
Xcelris_112 A
Xcelris_113 A
Xcelris_114 A
Xcelris_11B A
Xcelris_12 A
Xcelris_120 A
Xcelris_127 A
Xcelris_128 R
Xcelris_129 R
Xcelris_12A A
Xcelris_137 A
Xcelris_13B A
Xcelris_14 A
Xcelris_142 A
Xcelris_143 A
Xcelris_144 A
Xcelris_14B A
Xcelris_176 A
Xcelris_1A G
Xcelris_219 A
Xcelris_221 G
Xcelris_222 G
Xcelris_224 R
Xcelris_226 G
Xcelris_227 G
Xcelris_278 A
Xcelris_282 G
Xcelris_2A A
Xcelris_2B A
Xcelris_331 G
Xcelris_332 R
Xcelris_333 A
Xcelris_335 A
Xcelris_336 G
Xcelris_339 A
Xcelris_340 G
Xcelris_341 R
Xcelris_377 R
Xcelris_378 R
Xcelris_379 A
Xcelris_380 R
Xcelris_381 G
Xcelris_382 R
Xcelris_383 R
Xcelris_384 R
Xcelris_385 G
Xcelris_392 A
Xcelris_394 A
Xcelris_4A A
Xcelris_4B A
Xcelris_5A A
Xcelris_5B A
Xcelris_67 G
Xcelris_6A G
Xcelris_6B A
Xcelris_77 G
Xcelris_84 A
Xcelris_8B G
Xcelris_90 A
Xcelris_97 A
Xcelris_98 A
Xcelris_MT-134 A
Xcelris_MT-18 R
Xcelris_MT-38 G
Xcelris_MT-48 G
Xcelris_MT-6 G
Xcelris_MT-85 A
Xcelris_MT-9 A
Y1-f1_L5_I119 R
Y1-f2_L6_I121 G
Y1-f3_L7_I101 A
Y1-m1_L6_I120 R
Y1-m2_L4_I122 A
Y1-m3_L7_I123 R
Y1-m4_I124 A
Y1-m5_L7_I102 A
YPt565 A
YPt601 G
YPt609 A
YPt610 A
YPt637 G
YPt641 R
YPt648 R
You1 R
You3_L7_I1000005 A
Ypt566 G
Ypt567 A
Ypt568 R
Ypt569 G
Ypt570 R
Ypt571 A
Ypt572 R
Ypt573 A
Ypt574 G
Ypt575 A
Ypt576 G
Ypt577 R
Ypt578 R
Ypt579 R
Ypt580 G
Ypt581 R
Ypt582 G
Ypt583 G
Ypt584 A
Ypt585 R
Ypt586 A
Ypt587 R
Ypt588 G
Ypt589 A
Ypt590 R
Ypt591 G
Ypt592 R
Ypt593 R
Ypt595 G
Ypt596 R
Ypt597 R
Ypt598 G
Ypt599 R
Ypt600 A
Ypt602 A
Ypt603 R
Ypt606 A
Ypt607 R
Ypt608 A
Ypt622 A
Ypt623 R
Ypt624 G
Ypt626 R
Ypt638 A
Ypt640 G
Ypt643 A
Ypt645 R
Ypt646 A
Ypt647 G
Yt516 A
Yt517 R
Yt518 G
Yt519 A
Yt520 R
Yt521 A
Yt522 A
Yt523 A
Yt524 A
Yt525 G
Yt526 R
Yt527 A
Yt528 A
Yt529 A
Yt530 A
Yt531 A
Yt536 R
Yt538 R
Yt539 R
Yt540 A
ZJ1 A
ZJ2 R
ZJ3 G
ZJ4 A
india3 R
production A
yp914ypt A
ypt169_L3_I011 A
ypt170_L2_I012 A
ypt171_L2_I021 A
ypt175_L2_I023 A
ypt2041_L6_I002 A
ypt2043_L1_I037 A
ypt2051_L3_I003 A
ypt2053_L6_I004 A
ypt2063_L6_I005 G
ypt2069_L6_I006 A
ypt2071_L1_I038 G
ypt2082 A
ypt2086 A
ypt2087 A
ypt2091 A
ypt2092 A
ypt2093 A
ypt2094 A
ypt2095 A
ypt2098 A
ypt2100 A
ypt2101 A
ypt2102 A
ypt2103 R
ypt2105 A
ypt2106 A
ypt2107 A
ypt2108 A
ypt2109 A
ypt2110 A
ypt2111 A
ypt2112 G
ypt2114 A
ypt2115 A
ypt2116 A
ypt2117 A
ypt2118 R
ypt2119 A
ypt2120 R
ypt2121 A
ypt2122 A
ypt2124_L4_I052 A
ypt2126_L3_I053 A
ypt2128_L6_I054 R
ypt2144_L6_I055 A
ypt2145_L6_I056 A
ypt2146_L6_I001 A
ypt2163 A
ypt2164 A
ypt2165 A
ypt2166 A
ypt2167 A
ypt2168 A
ypt2169 G
ypt2170 R
ypt2171 A
ypt2172 A
ypt2173 A
ypt2174 R
ypt2175 G
ypt2176 A
ypt2177 A
ypt2178 G
ypt217_L2_I024 R
ypt2184 A
ypt2185 A
ypt2186 A
ypt2187 A
ypt2189 R
ypt2190 A
ypt2191 A
ypt219_L3_I025 A
ypt2201 R
ypt2205 A
ypt2209 R
ypt220_L2_I026 A
ypt2214 R
ypt2215 A
ypt2216 A
ypt2217 A
ypt2218 A
ypt2219 A
ypt221_L3_I042 R
ypt2220 A
ypt2221 G
ypt2222 A
ypt222_L3_I027 A
ypt2437 A
ypt2438 R
ypt2439 A
ypt2440 G
ypt2441 A
ypt2442 A
ypt2443 A
ypt2444 A
ypt2445 A
ypt2446 A
ypt2447 A
ypt2448 A
ypt2449 R
ypt2454 A
ypt2459 A
ypt2468 A
ypt2496 A
ypt2497 A
ypt2498 A
ypt2499 A
ypt2500 A
ypt2503 A
ypt2504 A
ypt2507 G
ypt2512 A
ypt2516 A
ypt2521 A
ypt2523 A
ypt2534 A
ypt2541 A
ypt2543 A
ypt2544 A
ypt2545 A
ypt2546 A
ypt2547 A
ypt2552 A
ypt2562 A
ypt2563 A
ypt2569 A
ypt2570 A
ypt2571 G
ypt2572 R
ypt2573 A
ypt2574 A
ypt2575 A
ypt2579 G
ypt258_L3_I028 R
ypt2598 A
ypt259_L2_I029 A
ypt2601 A
ypt2606 A
ypt2608 A
ypt2615 A
ypt2622 A
ypt2623 A
ypt2624 A
ypt2625 A
ypt2627 R
ypt2628 A
ypt2629 R
ypt262_L3_I030 R
ypt2630 R
ypt2636 A
ypt2638 A
ypt263_L3_I031 A
ypt2640 A
ypt2641 A
ypt2643 A
ypt2644 R
ypt2646 R
ypt264_L3_I032 R
ypt2650 R
ypt2653 A
ypt2656 A
ypt2657 A
ypt2658 A
ypt2661 A
ypt2664 A
ypt2665 G
ypt2669 A
ypt2670 G
ypt2671 R
ypt2672 A
ypt2673 A
ypt2678 A
ypt2706 A
ypt2722 A
ypt2724 A
ypt2729 A
ypt2733 A
ypt2739 A
ypt2740 A
ypt2745 A
ypt2746 R
ypt2760 A
ypt2761 A
ypt2765 R
ypt2766 R
ypt2775 A
ypt2780 G
ypt2781 R
ypt2782 A
ypt2783 A
ypt2784 A
ypt2785 A
ypt2786 A
ypt2787 A
ypt2788 A
ypt2789 A
ypt2790 A
ypt2791 A
ypt2792 A
ypt2799 A
ypt2800 A
ypt2808 A
ypt2810 A
ypt2812 A
ypt2813 A
ypt2814 A
ypt2815 A
ypt2816 A
ypt2817 A
ypt2819 A
ypt2821 A
ypt2822 A
ypt2823 A
ypt2824 A
ypt2825 A
ypt2826 A
ypt2827 A
ypt2828 A
ypt2831 R
ypt2832 A
ypt2842 R
ypt2843 R
ypt2849 A
ypt2859 A
ypt2860 A
ypt2861 A
ypt2862 A
ypt2863 A
ypt2870 A
ypt2871 A
ypt2887 A
ypt2888 A
ypt2889 A
ypt2890_L3_I040 A
ypt2891_L3_I041 A
ypt2892 A
ypt2893_L3_I025 A
ypt2894 R
ypt2895_L3_I026 A
ypt2902 A
ypt2909 R
ypt2910 A
ypt2911 A
ypt2912 A
ypt2918 A
ypt2929 R
ypt2930 A
ypt3001 A
ypt3002 A
ypt3003 R
ypt3004 A
ypt3005 A
ypt3006 A
ypt3007 A
ypt3008 A
ypt3009 A
ypt3010 A
ypt3011 A
ypt3012 A
ypt3016 R
ypt3017 R
ypt3028 A
ypt3038 R
ypt3040 A
ypt3041 R
ypt3042 G
ypt3043 G
ypt3044 A
ypt3045 R
ypt3046 G
ypt3047 G
ypt3050 G
ypt3051 G
ypt3052 A
ypt3061 R
ypt3069 R
ypt3072 A
ypt3133 G
ypt3134 A
ypt3135 R
ypt3136 G
ypt3137 R
ypt3138 A
ypt3139 R
ypt3140 A
ypt3141 A
ypt3142 R
ypt3143 A
ypt3144_L3_I039 G
ypt3145 R
ypt3146 A
ypt3149_L2_I034 R
ypt3150_L8_I023 A
ypt3159_L6_I035 A
ypt3160_L8_I024 A
ypt3162_L6_I036 G
ypt3179_L8_I025 G
ypt3180 R
ypt3181_L7_I038 R
ypt3182_L1_I039 A
ypt3189_L1_I040 R
ypt3190_L8_I026 A
ypt3191_L2_I041 G
ypt3193_L1_I027 A
ypt3195_L1_I042 A
ypt3196_L2_I043 A
ypt3197_L1_I044 G
ypt3204_L7_I046 A
ypt3205_L2_I047 A
ypt3206_L1_I048 A
ypt3207_L6_I050 A
ypt3210_L6_I051 R
ypt3211_L6_I052 A
ypt3212_L4_I028 A
ypt3213_L8_I029 A
ypt3219_L1_I030 A
ypt3220_L1_I031 A
ypt3221_L1_I032 A
ypt3222_L1_I033 A
ypt3224_L8_I043 R
ypt3225_L2_I053 R
ypt3226_L3_I044 A
ypt3229_L8_I045 A
ypt3238_L3_I046 A
ypt3239_L1_I035 A
ypt3241_L6_I055 A
ypt3243_L8_I047 A
ypt3245 A
ypt3247_L6_I051 A
ypt3259_L6_I002 A
ypt3260_L6_I003 G
ypt3262_L7_I005 A
ypt3269_L7_I006 G
ypt3270_L1_I007 G
ypt3271_L7_I008 R
ypt3272_L7_I010 G
ypt3274A_L7_I011 G
ypt3277_L6_I027 A
ypt4001 G
ypt47_L2_I029 A
ypt50_L2_I030 A
ypt53_L2_I032 G
ypt55_L1_I033 R
ypt890 A
ypt891 A
ypt896_L2_I047 G
ypt897_L3_I048 A
ypt898 G
ypt899_L6_I051 R
ypt901_L1_I052 R
ypt902_L1_I053 R
ypt903_L2_I054 A
ypt904_L4_I055 R
ypt905_L6_I056 G
ypt906_L3_I001 R
ypt907_L6_I002 R
ypt908_L1_I003 R
ypt909_L5_I004 G
ypt910_L3_I005 A
ypt911_L6_I006 A
ypt913 A
ypt915 A
ypt917 A
ypt918_L3_I007 A
ypt919_L4_I008 G
ypt920_L5_I010 G
ypt921_L8_I011 A
ypt923_L2_I051 G
ypt925_L2_I022 A
ypt928 G
ypt929 A
ypt930 A
ypt931 A
ypt932 A
ypt933 R
ypt934x G
ypt936 G
ypt937 G
ypt938x A
ypt939_L5_I025 A
ypt941_L5_I027 R
ypt942_L7_I028 G
ypt943 A
ypt944_L3_I030 R
ypt945_L4_I031 A
ypt946_L4_I032 R
ypt947_L5_I033 A
ypt948_L2_I034 A
ypt949_L3_I035 A
ypt950_L5_I036 G
ypt952 A
ypt953 A
ypt954 G
ypt955 R
ypt956x R
ypt957 R
ypt958 A
ypt959 G
ypt960 A
ypt961 R
ypt962 G
ypt963 R
ypt964 A
ypt965 R
ypt966 A
ypt971 G
ypt972x A
ypt973_L4_I037 G
ypt974 R
ypt975_L8_I039 R
ypt976_L7_I040 R
ypt977_L2_I041 G
ypt978_L2_I052 R
ypt979_L6_I042 G
ypt980_L3_I043 G
ypt981_L2_I044 A
ypt982_L4_I045 R
ypt984 A
yptwj R
147209 G
147830 A
GLF_denovo R
Gallus_Sonneriatii_d G
Ypt4000 R
Ypt4879 R