ChickenSD

ChickenSD / Individual SNP / ggaS0026000000001

Detail information of ggaS0026000000001

1.General Information

SNP ID: ggaS0026000000001
Organism: Gallus gallus
Individual: 124S_L2_I048

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: A

3.Reference Map information

Chrom Position Reference 124S_L2_I048
chr1 563 C A

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0026000000001 ENSGALG00000009771 - upstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S C
101S_L1_I028 C
102S_L3_I037 C
103S M
104S_L7_I029 M
105S_L3_I039 M
106S_L6_I030 C
107S_L2_I031 M
108S_L6_I032 M
109S_L5_I033 M
10S_L1_I052 M
110S_L4_I034 C
111S_L3_I047 M
112S_L3_I035 C
113S_L1_I036 C
114S_L3_I037 C
116S_L6_I038 A
117S_L2_I039 C
118S_L4_I040 M
119S_L3_I041 M
11S M
121S_L3_I042 A
122S_L4_I043 M
123S_L4_I044 C
125S_L3_I050 C
126S_L3_I051 C
127S_L2_I045 M
128S_L1_I042 M
129S_L3_I043 C
12S_L4_I011 C
130S_L4_I044 M
132S_L2_I046 M
133S_L8_I046 A
134S_L2_I047 A
135S_L3_I048 C
13S_L7_I012 M
14S_L2_I021 C
15S_L6_I022 M
16S_L5_I023 M
17S_L3_I024 C
18833 C
18S_L7_I025 C
19297 C
1S C
20736 M
20S_L7_I027 M
21S_L6_I028 C
23S_L2_I030 C
24S_L4_I031 A
25S_L3_I032 C
26S C
27S_L4_I034 M
28S_L4_I035 C
29S_L3_I036 C
2S C
30S_L2_I037 C
31S_L3_I038 C
32S_L1_I039 C
33S M
35S_L5_I041 M
36S_L5_I042 M
37S_L2_I043 M
38S_L6_I044 M
39S_L6_I053 M
3S_L4_I003 M
40S_L2_I054 C
42S_L3_I055 C
43S C
44S_L4_I001 M
45S_L2_I002 M
46S_L4_I003 M
47S_L3_I046 A
48S_L1_I004 M
49S_L1_I005 M
4S_L4_I004 C
50S_L1_I047 M
51S_L6_I048 M
52S_L2_I050 M
53S_L2_I006 A
54S_L2_I007 M
55S_L1_I008 C
56S_L1_I010 C
57S_L3_I046 M
58S_L4_I051 M
59S_L5_I052 M
5S M
60S_L5_I053 M
61S_L8_I054 C
62S_L8_I055 C
63S_L5_I056 M
64S_L4_I001 M
65S_L5_I002 M
66S_L2_I003 M
67S_L1_I011 M
68S_L3_I012 M
69S M
6S C
70S C
71S_L3_I023 M
72S_L1_I024 C
74S_L4_I026 M
75S_L3_I027 M
76S_L1_I028 C
77S_L4_I029 M
78S_L4_I030 M
79S_L2_I031 M
7S_L4_I007 C
80S_L3_I004 M
81S_L1_I005 C
82S M
83S_L3_I033 M
84S_L5_I006 M
85S_L5_I007 C
86S_L5_I008 C
87S_L5_I010 C
88S_L4_I011 M
90S_L4_I021 C
91S_L4_I022 M
92S_L5_I023 C
93S_L7_I024 C
95S_L8_I025 M
96S_L4_I026 A
97S_L8_I027 C
98S_L3_I034 C
99S_L2_I035 M
9S A
A1 M
A10 M
A12 M
A14 A
A3 M
A8 M
BKL2 M
BLB1_L2_I007 C
BLB2_L2_I008 C
BLO15 M
BLO3_L4_I022 C
BOJA2 C
BYW5_L2_I010 M
GVF C
India1 M
India11 A
India13 M
India15 M
India17 C
India19 M
India21 M
India23 M
India25 C
India27 M
India29 M
India31 M
India33 C
India35 M
India37 M
India39 C
India41 A
India43 M
India45 C
India47 M
India5 C
India51 C
India55 C
India57 C
India59 A
India61 M
India7 C
India9 M
L2 M
N1 M
N11 C
N13 M
N18 M
N3 M
N5 C
N7 M
N8 M
S-f1_L4_I106 M
S-f2_I107 C
S-f3_I108 M
S-f4_L4_I109 M
S-m1_I101 A
S-m2_I102 C
S-m3_I103 M
S-m4_L2_I104 M
S-m5_I105 M
S6 C
SAMN02486156 A
SAMN02486157 C
SAMN02486158 C
SAMN02486159 C
SAMN02486160 M
SAMN02486161 M
SAMN02486162 C
SAMN02486163 C
SAMN02486164 C
SAMN02486165 M
SAMN02486166 C
SAMN02486167 C
Silkia C
T2 M
T3 M
T5 C
TD1 M
TD12 C
TD15 C
TD22 M
TD27 C
TD30 M
TD6 M
TD9 M
Tibet M
Xcelris_10 C
Xcelris_101 C
Xcelris_104 M
Xcelris_105 M
Xcelris_10A M
Xcelris_10B C
Xcelris_112 C
Xcelris_113 C
Xcelris_114 C
Xcelris_11B C
Xcelris_12 M
Xcelris_120 C
Xcelris_127 C
Xcelris_12A M
Xcelris_13 M
Xcelris_13B C
Xcelris_14 A
Xcelris_143 C
Xcelris_144 C
Xcelris_14A M
Xcelris_14B C
Xcelris_174 M
Xcelris_175 C
Xcelris_1B C
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 M
Xcelris_227 M
Xcelris_278 C
Xcelris_2A C
Xcelris_2B M
Xcelris_331 C
Xcelris_332 A
Xcelris_333 M
Xcelris_335 A
Xcelris_336 C
Xcelris_340 C
Xcelris_341 C
Xcelris_377 C
Xcelris_378 C
Xcelris_379 A
Xcelris_380 C
Xcelris_382 C
Xcelris_383 A
Xcelris_384 A
Xcelris_385 A
Xcelris_392 C
Xcelris_4A M
Xcelris_4B C
Xcelris_5 C
Xcelris_5A C
Xcelris_5B C
Xcelris_67 A
Xcelris_6A M
Xcelris_6B M
Xcelris_7 M
Xcelris_77 C
Xcelris_84 A
Xcelris_8A C
Xcelris_8B C
Xcelris_90 C
Xcelris_97 C
Xcelris_98 C
Xcelris_MT-18 C
Xcelris_MT-48 M
Xcelris_MT-85 C
Xcelris_MT-9 M
Y1-f1_L5_I119 C
Y1-f2_L6_I121 M
Y1-f3_L7_I101 C
Y1-m1_L6_I120 A
Y1-m2_L4_I122 M
Y1-m3_L7_I123 C
Y1-m4_I124 M
Y1-m5_L7_I102 M
YPt601 M
YPt604 C
YPt609 C
YPt641 C
YPt648 C
You1 C
You3_L7_I1000005 C
Ypt566 C
Ypt567 A
Ypt568 M
Ypt569 C
Ypt570 C
Ypt571 C
Ypt572 M
Ypt573 C
Ypt575 A
Ypt577 C
Ypt578 M
Ypt579 C
Ypt581 C
Ypt583 M
Ypt584 A
Ypt585 C
Ypt586 C
Ypt587 C
Ypt588 C
Ypt589 C
Ypt590 C
Ypt592 C
Ypt593 C
Ypt594 C
Ypt595 C
Ypt596 M
Ypt598 C
Ypt599 M
Ypt600 C
Ypt603 M
Ypt606 A
Ypt608 C
Ypt623 C
Ypt626 C
Ypt638 C
Ypt640 A
Ypt643 A
Ypt645 C
Ypt646 A
Yt516 C
Yt517 M
Yt518 C
Yt519 C
Yt520 A
Yt521 A
Yt522 C
Yt523 C
Yt524 C
Yt525 C
Yt526 C
Yt527 M
Yt528 C
Yt529 M
Yt530 C
Yt531 C
Yt536 C
Yt538 M
Yt539 M
Yt540 C
ZJ1 C
ZJ3 M
ZJ4 C
india3 C
india49 M
production C
yp914ypt C
ypt169_L3_I011 M
ypt170_L2_I012 C
ypt171_L2_I021 C
ypt173_L2_I022 A
ypt175_L2_I023 C
ypt2041_L6_I002 C
ypt2043_L1_I037 M
ypt2051_L3_I003 C
ypt2053_L6_I004 M
ypt2063_L6_I005 M
ypt2069_L6_I006 M
ypt2071_L1_I038 M
ypt2082 M
ypt2086 C
ypt2087 A
ypt2091 M
ypt2092 C
ypt2093 M
ypt2094 C
ypt2095 A
ypt2098 C
ypt2100 C
ypt2101 C
ypt2102 M
ypt2103 M
ypt2105 C
ypt2106 M
ypt2107 M
ypt2108 M
ypt2109 M
ypt2110 M
ypt2111 C
ypt2112 M
ypt2114 C
ypt2115 M
ypt2116 M
ypt2117 C
ypt2118 C
ypt2119 A
ypt2120 M
ypt2121 C
ypt2122 M
ypt2124_L4_I052 M
ypt2127_L1_I036 M
ypt2128_L6_I054 M
ypt2144_L6_I055 C
ypt2145_L6_I056 C
ypt2146_L6_I001 C
ypt2163 C
ypt2164 C
ypt2165 C
ypt2166 C
ypt2167 C
ypt2168 C
ypt2169 M
ypt2170 M
ypt2171 M
ypt2172 C
ypt2173 M
ypt2174 M
ypt2175 M
ypt2176 M
ypt2177 M
ypt2178 A
ypt217_L2_I024 M
ypt2184 C
ypt2185 C
ypt2186 M
ypt2187 C
ypt2189 C
ypt2190 M
ypt2191 M
ypt219_L3_I025 M
ypt2200 C
ypt2201 M
ypt2205 C
ypt2209 M
ypt220_L2_I026 C
ypt2214 M
ypt2215 M
ypt2216 M
ypt2217 C
ypt2218 C
ypt2219 C
ypt221_L3_I042 C
ypt2220 C
ypt2221 C
ypt2222 M
ypt222_L3_I027 M
ypt2437 M
ypt2438 C
ypt2439 M
ypt2440 M
ypt2441 M
ypt2442 M
ypt2443 C
ypt2444 M
ypt2445 C
ypt2446 C
ypt2447 C
ypt2448 A
ypt2449 C
ypt2454 M
ypt2459 M
ypt2468 M
ypt2497 A
ypt2498 M
ypt2499 C
ypt2500 M
ypt2503 C
ypt2504 C
ypt2507 M
ypt2512 M
ypt2516 C
ypt2521 C
ypt2523 M
ypt2541 M
ypt2543 A
ypt2544 A
ypt2545 C
ypt2546 M
ypt2547 C
ypt2552 M
ypt2562 M
ypt2563 C
ypt2569 C
ypt2570 C
ypt2571 C
ypt2574 C
ypt2575 M
ypt2579 M
ypt258_L3_I028 C
ypt259_L2_I029 C
ypt2601 A
ypt2606 C
ypt2608 C
ypt2615 M
ypt2622 C
ypt2623 C
ypt2624 C
ypt2625 C
ypt2627 C
ypt2628 C
ypt2629 M
ypt262_L3_I030 M
ypt2630 M
ypt2636 M
ypt2638 M
ypt263_L3_I031 M
ypt2640 M
ypt2641 C
ypt2644 C
ypt2646 C
ypt264_L3_I032 M
ypt2650 M
ypt2653 M
ypt2656 A
ypt2657 M
ypt2658 M
ypt2661 C
ypt2664 M
ypt2665 M
ypt2669 M
ypt2670 A
ypt2671 M
ypt2672 C
ypt2673 C
ypt2678 M
ypt2706 M
ypt2722 M
ypt2724 M
ypt2729 M
ypt2733 C
ypt2739 C
ypt2740 M
ypt2745 M
ypt2746 M
ypt2760 M
ypt2761 M
ypt2765 M
ypt2766 M
ypt2775 C
ypt2780 C
ypt2781 M
ypt2782 C
ypt2784 M
ypt2785 M
ypt2786 C
ypt2787 M
ypt2788 M
ypt2789 M
ypt2790 C
ypt2791 M
ypt2792 C
ypt2799 M
ypt2800 M
ypt2808 M
ypt2810 C
ypt2812 C
ypt2813 C
ypt2814 M
ypt2816 C
ypt2817 M
ypt2819 C
ypt2821 C
ypt2822 M
ypt2823 A
ypt2824 C
ypt2825 C
ypt2826 M
ypt2827 A
ypt2828 M
ypt2831 M
ypt2832 M
ypt2842 A
ypt2843 M
ypt2849 M
ypt2859 M
ypt2860 C
ypt2861 C
ypt2870 M
ypt2887 C
ypt2888 C
ypt2890_L3_I040 M
ypt2891_L3_I041 C
ypt2892 M
ypt2893_L3_I025 A
ypt2894 M
ypt2895_L3_I026 M
ypt2902 C
ypt2909 M
ypt2910 M
ypt2911 M
ypt2912 C
ypt2918 M
ypt2929 M
ypt2930 M
ypt3001 C
ypt3002 M
ypt3003 M
ypt3004 C
ypt3005 A
ypt3006 M
ypt3007 C
ypt3008 M
ypt3009 C
ypt3010 C
ypt3011 C
ypt3012 C
ypt3016 A
ypt3017 M
ypt3028 C
ypt3038 M
ypt3040 M
ypt3041 M
ypt3042 C
ypt3043 M
ypt3044 M
ypt3045 M
ypt3046 C
ypt3047 M
ypt3050 M
ypt3051 M
ypt3052 C
ypt3061 M
ypt3069 M
ypt3072 A
ypt3133 C
ypt3134 M
ypt3135 M
ypt3136 M
ypt3137 C
ypt3138 A
ypt3139 C
ypt3140 C
ypt3141 C
ypt3142 M
ypt3143 M
ypt3144_L3_I039 C
ypt3145 C
ypt3146 C
ypt3149_L2_I034 M
ypt3150_L8_I023 C
ypt3159_L6_I035 C
ypt3160_L8_I024 C
ypt3162_L6_I036 M
ypt3179_L8_I025 M
ypt3180 C
ypt3181_L7_I038 M
ypt3182_L1_I039 C
ypt3189_L1_I040 C
ypt3190_L8_I026 M
ypt3191_L2_I041 C
ypt3193_L1_I027 M
ypt3195_L1_I042 M
ypt3196_L2_I043 M
ypt3197_L1_I044 M
ypt3198_L2_I045 C
ypt3204_L7_I046 C
ypt3205_L2_I047 M
ypt3206_L1_I048 M
ypt3207_L6_I050 M
ypt3210_L6_I051 C
ypt3211_L6_I052 C
ypt3212_L4_I028 C
ypt3213_L8_I029 C
ypt3219_L1_I030 C
ypt3220_L1_I031 M
ypt3221_L1_I032 C
ypt3222_L1_I033 C
ypt3226_L3_I044 M
ypt3228-7_L1_I034 M
ypt3238_L3_I046 C
ypt3239_L1_I035 A
ypt3243_L8_I047 C
ypt3245 C
ypt3246_L6_I050 M
ypt3247_L6_I051 C
ypt3257_L1_I056 M
ypt3258_L3_I001 C
ypt3261_L7_I004 C
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 M
ypt3274A_L7_I011 M
ypt3277_L6_I027 C
ypt47_L2_I029 C
ypt50_L2_I030 M
ypt53_L2_I032 C
ypt55_L1_I033 A
ypt890 M
ypt891 A
ypt896_L2_I047 C
ypt898 C
ypt899_L6_I051 C
ypt901_L1_I052 C
ypt902_L1_I053 C
ypt903_L2_I054 A
ypt904_L4_I055 C
ypt906_L3_I001 C
ypt907_L6_I002 A
ypt908_L1_I003 A
ypt909_L5_I004 A
ypt910_L3_I005 C
ypt913 M
ypt915 C
ypt916 C
ypt917 C
ypt918_L3_I007 C
ypt919_L4_I008 A
ypt920_L5_I010 M
ypt921_L8_I011 M
ypt922_L4_I012 M
ypt923_L2_I051 C
ypt925_L2_I022 A
ypt926_L2_I023 C
ypt928 C
ypt929 C
ypt930 C
ypt931 C
ypt933 C
ypt936 M
ypt938x C
ypt939_L5_I025 M
ypt941_L5_I027 C
ypt942_L7_I028 M
ypt943 C
ypt944_L3_I030 A
ypt945_L4_I031 M
ypt946_L4_I032 C
ypt947_L5_I033 M
ypt948_L2_I034 M
ypt950_L5_I036 M
ypt951 C
ypt952 C
ypt955 C
ypt956x C
ypt957 C
ypt958 C
ypt959 C
ypt960 A
ypt961 M
ypt962 C
ypt963 C
ypt964 C
ypt965 M
ypt966 C
ypt972x A
ypt974 C
ypt975_L8_I039 M
ypt976_L7_I040 C
ypt978_L2_I052 C
ypt980_L3_I043 M
ypt981_L2_I044 A
ypt982_L4_I045 C
ypt984 C
yptwj C
147209 C
147830 C
GLF_denovo C
Ypt4000 C
Ypt4879 C
Ypt4880 C