ChickenSD

ChickenSD / Individual SNP / ggaS0018003913285

Detail information of ggaS0018003913285

1.General Information

SNP ID: ggaS0018003913285
Organism: Gallus gallus
Individual: 117S_L2_I039

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 117S_L2_I039
chr6 2347 G C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0018003913285 - intergenic_variant => =>

5.Individual Genotype

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Individual Genotype
100S S
101S_L1_I028 C
102S_L3_I037 C
103S C
104S_L7_I029 S
105S_L3_I039 S
106S_L6_I030 S
107S_L2_I031 S
108S_L6_I032 G
109S_L5_I033 C
10S_L1_I052 C
110S_L4_I034 S
111S_L3_I047 S
112S_L3_I035 S
113S_L1_I036 G
114S_L3_I037 S
116S_L6_I038 C
118S_L4_I040 S
119S_L3_I041 G
11S C
120S_L1_I041 S
121S_L3_I042 G
122S_L4_I043 S
123S_L4_I044 S
124S_L2_I048 C
125S_L3_I050 C
126S_L3_I051 S
127S_L2_I045 S
128S_L1_I042 C
129S_L3_I043 S
12S_L4_I011 S
130S_L4_I044 S
131S_L2_I045 S
132S_L2_I046 C
133S_L8_I046 C
134S_L2_I047 S
135S_L3_I048 S
13S_L7_I012 S
14S_L2_I021 C
15S_L6_I022 C
16S_L5_I023 S
17S_L3_I024 G
18833 C
18S_L7_I025 C
19297 C
19912 S
19S_L4_I026 S
1S S
20736 C
20S_L7_I027 G
21S_L6_I028 S
22S_L6_I029 G
23S_L2_I030 S
24S_L4_I031 C
25S_L3_I032 C
26S S
27S_L4_I034 C
28S_L4_I035 C
29S_L3_I036 S
2S S
30S_L2_I037 S
31S_L3_I038 S
32S_L1_I039 S
33S G
35S_L5_I041 C
36S_L5_I042 S
37S_L2_I043 S
38S_L6_I044 C
39S_L6_I053 C
3S_L4_I003 S
40S_L2_I054 C
41S_L5_I045 S
42S_L3_I055 C
43S S
44S_L4_I001 C
45S_L2_I002 C
46S_L4_I003 S
47S_L3_I046 G
48S_L1_I004 S
49S_L1_I005 C
4S_L4_I004 C
50S_L1_I047 C
51S_L6_I048 C
52S_L2_I050 C
53S_L2_I006 S
54S_L2_I007 S
55S_L1_I008 C
56S_L1_I010 S
57S_L3_I046 S
58S_L4_I051 C
59S_L5_I052 S
5S S
60S_L5_I053 C
61S_L8_I054 S
62S_L8_I055 S
63S_L5_I056 C
64S_L4_I001 S
65S_L5_I002 C
66S_L2_I003 S
67S_L1_I011 S
68S_L3_I012 S
69S C
6S S
70S C
71S_L3_I023 S
72S_L1_I024 C
73S_L1_I025 S
74S_L4_I026 C
75S_L3_I027 S
76S_L1_I028 G
77S_L4_I029 C
78S_L4_I030 S
79S_L2_I031 C
7S_L4_I007 G
80S_L3_I004 C
81S_L1_I005 S
82S S
83S_L3_I033 C
84S_L5_I006 S
85S_L5_I007 S
86S_L5_I008 S
87S_L5_I010 S
88S_L4_I011 S
89S_L6_I012 S
90S_L4_I021 C
91S_L4_I022 S
92S_L5_I023 C
93S_L7_I024 C
95S_L8_I025 S
96S_L4_I026 S
97S_L8_I027 G
98S_L3_I034 S
99S_L2_I035 C
9S C
A1 C
A10 S
A12 S
A14 G
A3 C
A8 C
BKL2 C
BLB1_L2_I007 G
BLO1 G
BLO11 G
BLO15 G
BLO2 G
BLO3_L4_I022 G
BOJA2 G
BYW3_L3_I033 G
BYW5_L2_I010 G
GVF G
India1 C
India11 C
India13 C
India15 S
India17 S
India19 S
India21 S
India23 S
India25 C
India27 S
India29 S
India31 S
India33 S
India35 S
India37 S
India39 C
India41 S
India43 S
India45 S
India47 G
India5 S
India51 G
India55 C
India57 C
India59 C
India61 S
India7 C
India9 C
L2 C
N1 S
N11 S
N13 S
N18 G
N3 S
N5 S
N7 S
N8 S
S-f1_L4_I106 S
S-f2_I107 S
S-f3_I108 C
S-f4_L4_I109 S
S-m1_I101 G
S-m2_I102 G
S-m3_I103 C
S-m4_L2_I104 S
S-m5_I105 S
S6 G
SAMN02486156 C
SAMN02486157 S
SAMN02486158 S
SAMN02486159 C
SAMN02486160 S
SAMN02486161 S
SAMN02486162 G
SAMN02486163 S
SAMN02486164 S
SAMN02486165 S
SAMN02486166 S
SAMN02486167 C
Silkia C
T2 S
T3 G
T5 S
TD1 C
TD12 S
TD15 S
TD22 G
TD27 S
TD30 G
TD6 S
TD9 S
Tibet G
Xcelris_10 S
Xcelris_101 C
Xcelris_105 C
Xcelris_10B C
Xcelris_112 C
Xcelris_113 S
Xcelris_114 C
Xcelris_11B C
Xcelris_12 S
Xcelris_120 C
Xcelris_127 C
Xcelris_128 S
Xcelris_129 C
Xcelris_12A G
Xcelris_13 C
Xcelris_137 S
Xcelris_13B S
Xcelris_14 C
Xcelris_141 C
Xcelris_142 S
Xcelris_143 C
Xcelris_144 C
Xcelris_14A G
Xcelris_14B S
Xcelris_174 C
Xcelris_175 C
Xcelris_176 C
Xcelris_1A S
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 S
Xcelris_227 C
Xcelris_278 S
Xcelris_279 C
Xcelris_282 C
Xcelris_2A C
Xcelris_2B G
Xcelris_3 C
Xcelris_331 C
Xcelris_332 S
Xcelris_333 S
Xcelris_335 S
Xcelris_336 C
Xcelris_339 C
Xcelris_340 C
Xcelris_341 C
Xcelris_377 C
Xcelris_378 C
Xcelris_379 S
Xcelris_381 C
Xcelris_382 S
Xcelris_383 C
Xcelris_384 S
Xcelris_392 C
Xcelris_44 G
Xcelris_4A S
Xcelris_4B S
Xcelris_5 C
Xcelris_5A G
Xcelris_5B G
Xcelris_67 C
Xcelris_6A C
Xcelris_7 C
Xcelris_77 C
Xcelris_8 C
Xcelris_84 C
Xcelris_8A G
Xcelris_8B C
Xcelris_90 S
Xcelris_97 S
Xcelris_98 C
Xcelris_MT-134 C
Xcelris_MT-18 S
Xcelris_MT-6 C
Xcelris_MT-85 C
Xcelris_MT-9 C
Y1-f1_L5_I119 C
Y1-f2_L6_I121 C
Y1-f3_L7_I101 C
Y1-m1_L6_I120 S
Y1-m2_L4_I122 C
Y1-m3_L7_I123 C
Y1-m4_I124 S
Y1-m5_L7_I102 S
YPt565 C
YPt601 C
YPt604 C
YPt609 S
YPt610 S
YPt637 S
YPt641 S
YPt648 S
You1 C
You3_L7_I1000005 C
Ypt566 C
Ypt567 G
Ypt568 C
Ypt569 S
Ypt570 C
Ypt571 C
Ypt572 C
Ypt573 C
Ypt574 S
Ypt575 S
Ypt576 S
Ypt577 C
Ypt578 C
Ypt579 S
Ypt580 C
Ypt581 C
Ypt582 S
Ypt583 C
Ypt584 C
Ypt585 S
Ypt586 C
Ypt587 S
Ypt588 S
Ypt589 C
Ypt590 C
Ypt591 C
Ypt592 C
Ypt593 C
Ypt594 S
Ypt595 S
Ypt596 C
Ypt597 C
Ypt598 S
Ypt599 C
Ypt600 C
Ypt602 G
Ypt603 S
Ypt606 C
Ypt607 C
Ypt608 S
Ypt622 S
Ypt623 S
Ypt624 S
Ypt626 C
Ypt638 C
Ypt640 S
Ypt642 C
Ypt643 S
Ypt645 G
Ypt646 S
Yt516 S
Yt517 S
Yt518 C
Yt519 S
Yt520 S
Yt522 C
Yt523 C
Yt524 S
Yt525 S
Yt526 S
Yt527 C
Yt528 S
Yt529 C
Yt530 C
Yt531 S
Yt536 S
Yt538 C
Yt539 S
Yt540 C
ZJ1 S
ZJ2 S
ZJ3 S
ZJ4 S
india3 S
india49 S
production S
yp914ypt C
ypt169_L3_I011 S
ypt170_L2_I012 S
ypt171_L2_I021 S
ypt173_L2_I022 C
ypt175_L2_I023 C
ypt2041_L6_I002 C
ypt2043_L1_I037 S
ypt2051_L3_I003 S
ypt2053_L6_I004 S
ypt2063_L6_I005 S
ypt2069_L6_I006 S
ypt2071_L1_I038 C
ypt2082 S
ypt2086 C
ypt2087 C
ypt2091 S
ypt2092 S
ypt2093 C
ypt2094 C
ypt2095 S
ypt2098 C
ypt2100 C
ypt2101 C
ypt2102 S
ypt2103 S
ypt2105 C
ypt2106 C
ypt2107 C
ypt2108 S
ypt2109 C
ypt2110 S
ypt2111 C
ypt2112 S
ypt2114 G
ypt2115 S
ypt2116 G
ypt2117 C
ypt2118 S
ypt2119 S
ypt2120 G
ypt2121 S
ypt2122 C
ypt2124_L4_I052 S
ypt2126_L3_I053 S
ypt2127_L1_I036 S
ypt2128_L6_I054 S
ypt2144_L6_I055 S
ypt2145_L6_I056 G
ypt2146_L6_I001 C
ypt2163 S
ypt2164 C
ypt2165 C
ypt2166 C
ypt2167 C
ypt2168 S
ypt2169 S
ypt2170 S
ypt2171 G
ypt2172 C
ypt2173 S
ypt2174 S
ypt2175 C
ypt2176 S
ypt2177 C
ypt2178 S
ypt217_L2_I024 S
ypt2184 S
ypt2185 S
ypt2186 S
ypt2187 S
ypt2189 S
ypt2190 C
ypt2191 S
ypt219_L3_I025 C
ypt2200 C
ypt2201 S
ypt2205 S
ypt2209 S
ypt220_L2_I026 S
ypt2214 C
ypt2215 C
ypt2216 S
ypt2217 S
ypt2218 G
ypt2219 S
ypt221_L3_I042 S
ypt2220 C
ypt2221 C
ypt2222 C
ypt222_L3_I027 S
ypt2437 S
ypt2438 S
ypt2439 S
ypt2440 G
ypt2441 C
ypt2442 C
ypt2443 S
ypt2444 S
ypt2445 S
ypt2446 G
ypt2447 S
ypt2448 C
ypt2449 S
ypt2454 S
ypt2459 G
ypt2468 C
ypt2496 S
ypt2497 G
ypt2498 S
ypt2499 S
ypt2500 C
ypt2503 C
ypt2504 S
ypt2507 S
ypt2512 C
ypt2516 S
ypt2521 S
ypt2523 S
ypt2534 S
ypt2541 C
ypt2543 C
ypt2544 S
ypt2545 S
ypt2546 S
ypt2547 C
ypt2552 C
ypt2562 S
ypt2563 G
ypt2569 C
ypt2570 C
ypt2571 C
ypt2572 S
ypt2573 S
ypt2574 S
ypt2575 C
ypt2579 G
ypt258_L3_I028 S
ypt2598 G
ypt259_L2_I029 S
ypt2601 C
ypt2606 C
ypt2608 S
ypt2615 C
ypt2622 C
ypt2623 S
ypt2624 S
ypt2625 S
ypt2627 S
ypt2628 S
ypt2629 G
ypt262_L3_I030 C
ypt2630 S
ypt2636 S
ypt2638 C
ypt263_L3_I031 C
ypt2640 S
ypt2641 C
ypt2643 S
ypt2644 C
ypt2646 S
ypt264_L3_I032 C
ypt2650 C
ypt2653 S
ypt2656 G
ypt2657 S
ypt2658 C
ypt2661 C
ypt2664 C
ypt2665 C
ypt2669 C
ypt2670 S
ypt2671 S
ypt2672 C
ypt2673 S
ypt2678 S
ypt2706 C
ypt2722 S
ypt2724 S
ypt2729 C
ypt2733 S
ypt2739 S
ypt2740 C
ypt2745 S
ypt2746 C
ypt2760 S
ypt2761 S
ypt2765 S
ypt2766 C
ypt2775 S
ypt2780 C
ypt2781 S
ypt2782 C
ypt2783 S
ypt2784 C
ypt2785 S
ypt2786 G
ypt2787 C
ypt2788 S
ypt2789 C
ypt2790 G
ypt2791 C
ypt2792 S
ypt2799 S
ypt2800 C
ypt2808 S
ypt2810 S
ypt2812 S
ypt2813 S
ypt2814 S
ypt2815 S
ypt2816 C
ypt2817 S
ypt2819 C
ypt2821 C
ypt2822 S
ypt2823 S
ypt2824 G
ypt2825 S
ypt2826 C
ypt2827 C
ypt2828 C
ypt2831 S
ypt2832 S
ypt2842 G
ypt2843 C
ypt2849 C
ypt2859 C
ypt2860 G
ypt2862 G
ypt2863 G
ypt2870 G
ypt2871 G
ypt2887 G
ypt2888 G
ypt2889 G
ypt2890_L3_I040 G
ypt2891_L3_I041 G
ypt2892 C
ypt2893_L3_I025 C
ypt2894 C
ypt2895_L3_I026 S
ypt2902 S
ypt2909 S
ypt2910 S
ypt2911 S
ypt2912 C
ypt2918 S
ypt2929 S
ypt2930 S
ypt3001 S
ypt3002 S
ypt3003 S
ypt3004 C
ypt3005 S
ypt3006 S
ypt3007 S
ypt3008 G
ypt3009 S
ypt3010 G
ypt3011 C
ypt3012 C
ypt3016 C
ypt3017 S
ypt3028 C
ypt3038 C
ypt3040 C
ypt3041 S
ypt3042 S
ypt3043 S
ypt3044 G
ypt3045 S
ypt3046 S
ypt3047 S
ypt3050 S
ypt3051 S
ypt3052 S
ypt3061 C
ypt3069 S
ypt3072 G
ypt3133 G
ypt3134 C
ypt3135 S
ypt3136 S
ypt3137 G
ypt3138 C
ypt3139 S
ypt3140 S
ypt3141 C
ypt3142 S
ypt3143 S
ypt3144_L3_I039 G
ypt3145 S
ypt3146 S
ypt3149_L2_I034 S
ypt3150_L8_I023 S
ypt3159_L6_I035 C
ypt3160_L8_I024 C
ypt3162_L6_I036 S
ypt3179_L8_I025 G
ypt3180 S
ypt3181_L7_I038 C
ypt3182_L1_I039 S
ypt3189_L1_I040 S
ypt3190_L8_I026 G
ypt3191_L2_I041 S
ypt3193_L1_I027 G
ypt3195_L1_I042 S
ypt3196_L2_I043 S
ypt3197_L1_I044 G
ypt3198_L2_I045 S
ypt3204_L7_I046 C
ypt3206_L1_I048 C
ypt3210_L6_I051 C
ypt3211_L6_I052 C
ypt3212_L4_I028 S
ypt3213_L8_I029 C
ypt3219_L1_I030 C
ypt3220_L1_I031 S
ypt3221_L1_I032 C
ypt3222_L1_I033 C
ypt3224_L8_I043 S
ypt3225_L2_I053 C
ypt3226_L3_I044 G
ypt3228-7_L1_I034 C
ypt3229_L8_I045 S
ypt3238_L3_I046 S
ypt3239_L1_I035 C
ypt3240_L6_I054 C
ypt3241_L6_I055 S
ypt3243_L8_I047 C
ypt3245 C
ypt3246_L6_I050 G
ypt3247_L6_I051 S
ypt3257_L1_I056 C
ypt3258_L3_I001 C
ypt3259_L6_I002 C
ypt3260_L6_I003 S
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 S
ypt3274A_L7_I011 C
ypt3277_L6_I027 S
ypt3278_L3_I028 C
ypt4001 C
ypt47_L2_I029 C
ypt50_L2_I030 G
ypt51_L2_I031 C
ypt53_L2_I032 C
ypt55_L1_I033 S
ypt890 S
ypt891 S
ypt896_L2_I047 C
ypt897_L3_I048 C
ypt898 C
ypt899_L6_I051 C
ypt901_L1_I052 C
ypt902_L1_I053 C
ypt903_L2_I054 S
ypt905_L6_I056 C
ypt906_L3_I001 S
ypt907_L6_I002 C
ypt908_L1_I003 S
ypt910_L3_I005 C
ypt912 G
ypt913 S
ypt915 S
ypt916 C
ypt917 G
ypt918_L3_I007 G
ypt919_L4_I008 C
ypt920_L5_I010 C
ypt922_L4_I012 C
ypt923_L2_I051 C
ypt924_L3_I021 C
ypt925_L2_I022 C
ypt926_L2_I023 G
ypt928 C
ypt929 S
ypt930 S
ypt931 C
ypt932 C
ypt933 S
ypt937 C
ypt938x C
ypt939_L5_I025 C
ypt941_L5_I027 C
ypt942_L7_I028 C
ypt943 C
ypt944_L3_I030 S
ypt945_L4_I031 C
ypt946_L4_I032 C
ypt947_L5_I033 S
ypt948_L2_I034 S
ypt949_L3_I035 C
ypt950_L5_I036 C
ypt951 C
ypt952 S
ypt953 S
ypt954 S
ypt955 S
ypt956x S
ypt957 C
ypt958 C
ypt959 C
ypt960 G
ypt961 C
ypt962 S
ypt963 C
ypt964 C
ypt965 C
ypt966 C
ypt971 S
ypt972x S
ypt973_L4_I037 S
ypt974 C
ypt975_L8_I039 C
ypt976_L7_I040 S
ypt977_L2_I041 C
ypt978_L2_I052 C
ypt979_L6_I042 S
ypt980_L3_I043 C
ypt981_L2_I044 C
ypt982_L4_I045 S
ypt984 C
yptwj S
147209 S
147830 C
GLF_denovo C
Gallus_Sonneriatii_d C
Ypt4000 C
Ypt4879 C
Ypt4880 S