ggaS0018003913280

Detail information of ggaS0018003913280

1.General Information

SNP ID:	ggaS0018003913280
Organism:	Gallus gallus
Individual:	117S_L2_I039

2.Allele information

Platform:	SOLEXA
Method:	sequence
SNP Class:	SNP
Genotype:	C

3.Reference Map information

Chrom	Position	Reference	117S_L2_I039
chr6	1185	T	C

4.Gene information

Var ID	Gene ID	Transcript ID	Gene Symbol	Variant Effect	Biotype	cDNA Position	Allele Change	Protein ID	Protein Position	Residue Change
ggaS0018003913280	-			intergenic_variant			=>			=>

5.Individual Genotype

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Individual	Genotype
100S	T
101S_L1_I028	Y
102S_L3_I037	T
103S	T
104S_L7_I029	C
105S_L3_I039	Y
106S_L6_I030	Y
107S_L2_I031	C
108S_L6_I032	Y
109S_L5_I033	Y
10S_L1_I052	C
110S_L4_I034	Y
111S_L3_I047	Y
112S_L3_I035	C
113S_L1_I036	Y
114S_L3_I037	C
116S_L6_I038	Y
118S_L4_I040	C
119S_L3_I041	C
11S	Y
120S_L1_I041	Y
121S_L3_I042	C
122S_L4_I043	C
123S_L4_I044	Y
124S_L2_I048	Y
125S_L3_I050	Y
126S_L3_I051	Y
127S_L2_I045	C
128S_L1_I042	C
129S_L3_I043	C
12S_L4_I011	Y
130S_L4_I044	Y
131S_L2_I045	C
132S_L2_I046	C
133S_L8_I046	C
134S_L2_I047	C
135S_L3_I048	Y
13S_L7_I012	Y
14S_L2_I021	Y
15S_L6_I022	Y
16S_L5_I023	C
17S_L3_I024	T
18833	Y
18S_L7_I025	Y
19297	C
19912	C
19S_L4_I026	C
1S	T
20736	Y
20S_L7_I027	T
21S_L6_I028	C
22S_L6_I029	T
23S_L2_I030	C
24S_L4_I031	C
25S_L3_I032	C
26S	Y
27S_L4_I034	Y
28S_L4_I035	Y
29S_L3_I036	C
2S	T
30S_L2_I037	Y
31S_L3_I038	C
32S_L1_I039	C
33S	Y
35S_L5_I041	C
36S_L5_I042	Y
37S_L2_I043	C
38S_L6_I044	Y
39S_L6_I053	C
3S_L4_I003	Y
40S_L2_I054	C
41S_L5_I045	C
42S_L3_I055	C
43S	C
44S_L4_I001	C
45S_L2_I002	C
46S_L4_I003	Y
47S_L3_I046	Y
48S_L1_I004	Y
49S_L1_I005	T
4S_L4_I004	C
50S_L1_I047	C
51S_L6_I048	C
52S_L2_I050	T
53S_L2_I006	T
54S_L2_I007	C
55S_L1_I008	Y
56S_L1_I010	Y
57S_L3_I046	T
58S_L4_I051	C
59S_L5_I052	Y
5S	T
60S_L5_I053	Y
61S_L8_I054	Y
62S_L8_I055	Y
63S_L5_I056	T
64S_L4_I001	T
65S_L5_I002	T
66S_L2_I003	Y
67S_L1_I011	T
68S_L3_I012	T
69S	Y
6S	Y
70S	T
71S_L3_I023	Y
72S_L1_I024	Y
73S_L1_I025	T
74S_L4_I026	T
75S_L3_I027	C
76S_L1_I028	C
77S_L4_I029	C
79S_L2_I031	C
7S_L4_I007	C
80S_L3_I004	C
81S_L1_I005	C
82S	T
83S_L3_I033	T
84S_L5_I006	T
85S_L5_I007	T
86S_L5_I008	Y
87S_L5_I010	T
88S_L4_I011	Y
89S_L6_I012	Y
90S_L4_I021	C
91S_L4_I022	T
92S_L5_I023	C
93S_L7_I024	Y
95S_L8_I025	Y
96S_L4_I026	T
97S_L8_I027	T
98S_L3_I034	T
99S_L2_I035	T
9S	Y
A1	C
A10	C
A12	Y
A14	C
A3	Y
A8	C
BLB1_L2_I007	T
BLO1	T
BLO11	T
BLO15	T
BLO2	T
BLO3_L4_I022	T
BOJA2	T
BYW3_L3_I033	T
BYW5_L2_I010	T
GVF	T
India1	T
India11	C
India13	Y
India15	Y
India17	Y
India19	Y
India21	T
India23	Y
India25	T
India27	C
India29	C
India31	T
India33	T
India35	Y
India37	C
India39	C
India41	C
India43	T
India45	T
India47	T
India5	C
India51	Y
India55	C
India57	Y
India59	C
India61	Y
India7	C
India9	C
L2	T
N1	C
N11	C
N13	Y
N18	C
N3	C
N5	C
N7	C
N8	Y
S-f1_L4_I106	Y
S-f2_I107	T
S-f3_I108	T
S-f4_L4_I109	T
S-m1_I101	Y
S-m2_I102	T
S-m3_I103	T
S-m4_L2_I104	Y
S-m5_I105	T
S6	C
SAMN02486156	T
SAMN02486157	Y
SAMN02486158	T
SAMN02486159	Y
SAMN02486160	Y
SAMN02486161	Y
SAMN02486162	C
SAMN02486163	Y
SAMN02486164	Y
SAMN02486165	C
SAMN02486166	C
SAMN02486167	Y
Silkia	T
T2	T
T3	T
T5	Y
TD1	Y
TD12	Y
TD15	Y
TD22	C
TD27	Y
TD30	Y
TD6	C
TD9	C
Tibet	T
Xcelris_10	C
Xcelris_101	C
Xcelris_104	C
Xcelris_105	C
Xcelris_10A	T
Xcelris_10B	T
Xcelris_112	C
Xcelris_113	Y
Xcelris_114	Y
Xcelris_11B	Y
Xcelris_120	Y
Xcelris_127	C
Xcelris_128	C
Xcelris_129	C
Xcelris_12A	Y
Xcelris_13	C
Xcelris_137	Y
Xcelris_13B	Y
Xcelris_14	C
Xcelris_143	C
Xcelris_144	Y
Xcelris_14A	Y
Xcelris_14B	Y
Xcelris_174	T
Xcelris_176	T
Xcelris_1A	Y
Xcelris_1B	C
Xcelris_219	C
Xcelris_221	C
Xcelris_222	C
Xcelris_226	C
Xcelris_227	C
Xcelris_275	C
Xcelris_280	C
Xcelris_2A	Y
Xcelris_2B	T
Xcelris_3	C
Xcelris_331	C
Xcelris_333	Y
Xcelris_335	Y
Xcelris_336	C
Xcelris_339	C
Xcelris_377	C
Xcelris_378	C
Xcelris_379	C
Xcelris_380	C
Xcelris_382	C
Xcelris_384	C
Xcelris_385	C
Xcelris_44	T
Xcelris_4A	Y
Xcelris_4B	T
Xcelris_5	C
Xcelris_67	C
Xcelris_6A	C
Xcelris_7	T
Xcelris_77	T
Xcelris_8	C
Xcelris_84	Y
Xcelris_8B	C
Xcelris_90	C
Xcelris_97	C
Xcelris_98	C
Xcelris_MT-18	T
Xcelris_MT-46	C
Xcelris_MT-9	C
Y1-f1_L5_I119	T
Y1-f2_L6_I121	T
Y1-f3_L7_I101	T
Y1-m1_L6_I120	T
Y1-m2_L4_I122	T
Y1-m3_L7_I123	T
Y1-m4_I124	Y
Y1-m5_L7_I102	Y
YPt565	Y
YPt601	T
YPt604	Y
YPt609	C
YPt610	Y
YPt637	Y
YPt641	Y
YPt648	T
You1	T
You3_L7_I1000005	Y
Ypt566	T
Ypt567	T
Ypt568	C
Ypt569	Y
Ypt570	C
Ypt571	Y
Ypt572	C
Ypt573	C
Ypt574	C
Ypt575	C
Ypt576	Y
Ypt577	Y
Ypt578	T
Ypt579	Y
Ypt580	C
Ypt581	T
Ypt582	T
Ypt583	C
Ypt584	T
Ypt585	Y
Ypt586	T
Ypt587	T
Ypt588	T
Ypt589	T
Ypt590	T
Ypt591	T
Ypt592	T
Ypt593	T
Ypt594	T
Ypt595	T
Ypt596	T
Ypt597	T
Ypt598	T
Ypt599	T
Ypt600	T
Ypt602	Y
Ypt603	C
Ypt606	C
Ypt607	Y
Ypt608	Y
Ypt622	Y
Ypt623	C
Ypt624	T
Ypt626	T
Ypt638	T
Ypt640	Y
Ypt642	C
Ypt645	T
Ypt646	Y
Ypt647	C
Yt516	Y
Yt517	C
Yt518	C
Yt519	T
Yt520	Y
Yt521	C
Yt522	Y
Yt523	Y
Yt524	Y
Yt525	T
Yt526	T
Yt527	Y
Yt528	C
Yt529	C
Yt530	Y
Yt531	T
Yt536	Y
Yt538	C
Yt539	Y
Yt540	C
ZJ1	C
ZJ2	Y
ZJ3	T
ZJ4	C
india3	Y
india49	T
production	T
yp914ypt	T
ypt169_L3_I011	T
ypt170_L2_I012	C
ypt171_L2_I021	T
ypt173_L2_I022	Y
ypt175_L2_I023	C
ypt2041_L6_I002	T
ypt2043_L1_I037	T
ypt2051_L3_I003	T
ypt2053_L6_I004	Y
ypt2063_L6_I005	Y
ypt2069_L6_I006	T
ypt2071_L1_I038	C
ypt2082	Y
ypt2086	C
ypt2087	C
ypt2091	C
ypt2092	C
ypt2093	Y
ypt2094	Y
ypt2095	C
ypt2098	C
ypt2100	T
ypt2101	Y
ypt2102	Y
ypt2103	C
ypt2105	Y
ypt2106	C
ypt2107	Y
ypt2108	Y
ypt2109	Y
ypt2110	C
ypt2112	C
ypt2114	Y
ypt2115	C
ypt2116	C
ypt2117	T
ypt2118	Y
ypt2119	Y
ypt2121	T
ypt2122	C
ypt2124_L4_I052	T
ypt2126_L3_I053	T
ypt2127_L1_I036	C
ypt2128_L6_I054	Y
ypt2144_L6_I055	C
ypt2145_L6_I056	Y
ypt2146_L6_I001	Y
ypt2163	T
ypt2164	C
ypt2165	T
ypt2166	Y
ypt2167	Y
ypt2168	T
ypt2169	Y
ypt2170	Y
ypt2171	T
ypt2172	Y
ypt2173	C
ypt2174	T
ypt2175	C
ypt2176	Y
ypt2177	T
ypt2178	T
ypt217_L2_I024	Y
ypt2184	T
ypt2185	Y
ypt2186	C
ypt2187	T
ypt2189	T
ypt2190	C
ypt2191	Y
ypt219_L3_I025	Y
ypt2200	C
ypt2201	Y
ypt2205	Y
ypt2209	C
ypt220_L2_I026	T
ypt2214	T
ypt2215	C
ypt2216	Y
ypt2217	Y
ypt2219	T
ypt221_L3_I042	T
ypt2220	Y
ypt2221	T
ypt2222	T
ypt222_L3_I027	C
ypt2437	Y
ypt2438	Y
ypt2439	C
ypt2440	Y
ypt2441	Y
ypt2442	C
ypt2443	Y
ypt2444	Y
ypt2445	C
ypt2446	Y
ypt2447	C
ypt2448	Y
ypt2449	T
ypt2454	C
ypt2459	C
ypt2468	Y
ypt2496	Y
ypt2497	C
ypt2498	C
ypt2499	Y
ypt2500	Y
ypt2503	Y
ypt2504	Y
ypt2507	C
ypt2512	C
ypt2516	C
ypt2521	Y
ypt2523	Y
ypt2534	C
ypt2541	C
ypt2543	C
ypt2544	C
ypt2545	Y
ypt2546	Y
ypt2547	Y
ypt2552	Y
ypt2562	C
ypt2563	T
ypt2569	Y
ypt2570	Y
ypt2571	C
ypt2572	C
ypt2573	C
ypt2574	T
ypt2575	Y
ypt2579	T
ypt258_L3_I028	C
ypt2598	T
ypt259_L2_I029	C
ypt2601	C
ypt2606	C
ypt2608	Y
ypt2615	Y
ypt2622	Y
ypt2623	C
ypt2624	T
ypt2625	Y
ypt2627	C
ypt2628	C
ypt2629	Y
ypt262_L3_I030	C
ypt2630	Y
ypt2636	C
ypt2638	Y
ypt263_L3_I031	C
ypt2640	Y
ypt2641	C
ypt2643	C
ypt2644	C
ypt2646	C
ypt264_L3_I032	C
ypt2650	C
ypt2653	Y
ypt2656	Y
ypt2657	Y
ypt2658	T
ypt2661	C
ypt2664	C
ypt2665	C
ypt2669	T
ypt2670	T
ypt2671	C
ypt2672	Y
ypt2673	Y
ypt2678	T
ypt2706	C
ypt2722	Y
ypt2724	T
ypt2729	Y
ypt2733	Y
ypt2739	Y
ypt2740	T
ypt2745	T
ypt2746	T
ypt2760	Y
ypt2761	T
ypt2765	T
ypt2766	Y
ypt2775	Y
ypt2780	T
ypt2781	Y
ypt2782	Y
ypt2783	T
ypt2784	T
ypt2785	C
ypt2786	C
ypt2787	C
ypt2789	C
ypt2790	C
ypt2791	C
ypt2792	C
ypt2799	T
ypt2800	T
ypt2808	T
ypt2810	T
ypt2812	Y
ypt2813	T
ypt2814	Y
ypt2815	Y
ypt2816	C
ypt2817	T
ypt2819	C
ypt2821	Y
ypt2822	Y
ypt2823	T
ypt2824	T
ypt2825	T
ypt2826	T
ypt2827	Y
ypt2828	C
ypt2831	C
ypt2832	Y
ypt2842	C
ypt2843	Y
ypt2849	C
ypt2860	T
ypt2862	T
ypt2863	T
ypt2870	T
ypt2871	T
ypt2887	T
ypt2888	T
ypt2889	T
ypt2890_L3_I040	T
ypt2891_L3_I041	T
ypt2892	T
ypt2893_L3_I025	C
ypt2894	Y
ypt2895_L3_I026	Y
ypt2902	Y
ypt2909	Y
ypt2910	T
ypt2911	Y
ypt2912	T
ypt2918	C
ypt2929	C
ypt2930	T
ypt3001	T
ypt3002	Y
ypt3003	C
ypt3004	C
ypt3005	C
ypt3006	T
ypt3007	T
ypt3008	T
ypt3009	C
ypt3010	Y
ypt3011	C
ypt3012	Y
ypt3016	C
ypt3017	Y
ypt3028	C
ypt3038	C
ypt3040	T
ypt3041	C
ypt3042	C
ypt3043	Y
ypt3044	C
ypt3045	C
ypt3046	C
ypt3047	C
ypt3050	Y
ypt3051	Y
ypt3052	T
ypt3061	T
ypt3069	T
ypt3072	Y
ypt3133	T
ypt3134	T
ypt3135	Y
ypt3136	T
ypt3137	C
ypt3138	T
ypt3139	Y
ypt3140	T
ypt3141	Y
ypt3142	Y
ypt3143	Y
ypt3144_L3_I039	C
ypt3145	Y
ypt3146	Y
ypt3149_L2_I034	C
ypt3150_L8_I023	C
ypt3159_L6_I035	Y
ypt3160_L8_I024	T
ypt3162_L6_I036	T
ypt3179_L8_I025	T
ypt3180	Y
ypt3181_L7_I038	Y
ypt3182_L1_I039	Y
ypt3189_L1_I040	Y
ypt3190_L8_I026	C
ypt3191_L2_I041	Y
ypt3193_L1_I027	Y
ypt3195_L1_I042	C
ypt3196_L2_I043	C
ypt3197_L1_I044	T
ypt3198_L2_I045	C
ypt3204_L7_I046	C
ypt3205_L2_I047	C
ypt3206_L1_I048	C
ypt3207_L6_I050	T
ypt3210_L6_I051	T
ypt3211_L6_I052	C
ypt3212_L4_I028	Y
ypt3213_L8_I029	Y
ypt3219_L1_I030	Y
ypt3221_L1_I032	Y
ypt3222_L1_I033	C
ypt3224_L8_I043	C
ypt3225_L2_I053	C
ypt3226_L3_I044	Y
ypt3228-7_L1_I034	C
ypt3229_L8_I045	Y
ypt3238_L3_I046	Y
ypt3239_L1_I035	C
ypt3243_L8_I047	C
ypt3245	Y
ypt3246_L6_I050	Y
ypt3247_L6_I051	Y
ypt3257_L1_I056	T
ypt3259_L6_I002	T
ypt3260_L6_I003	Y
ypt3261_L7_I004	C
ypt3262_L7_I005	C
ypt3269_L7_I006	C
ypt3270_L1_I007	C
ypt3272_L7_I010	C
ypt3274A_L7_I011	C
ypt3275_L1_I012	C
ypt3289_L8_I021	C
ypt47_L2_I029	Y
ypt50_L2_I030	T
ypt51_L2_I031	C
ypt53_L2_I032	C
ypt890	Y
ypt891	Y
ypt896_L2_I047	C
ypt897_L3_I048	C
ypt901_L1_I052	C
ypt902_L1_I053	C
ypt903_L2_I054	C
ypt904_L4_I055	C
ypt906_L3_I001	C
ypt908_L1_I003	C
ypt909_L5_I004	C
ypt912	T
ypt913	Y
ypt915	T
ypt916	C
ypt919_L4_I008	C
ypt920_L5_I010	C
ypt922_L4_I012	T
ypt923_L2_I051	T
ypt924_L3_I021	C
ypt925_L2_I022	Y
ypt928	C
ypt929	C
ypt930	C
ypt931	C
ypt933	T
ypt935	C
ypt939_L5_I025	C
ypt941_L5_I027	T
ypt942_L7_I028	T
ypt943	T
ypt944_L3_I030	T
ypt945_L4_I031	T
ypt946_L4_I032	T
ypt947_L5_I033	Y
ypt948_L2_I034	Y
ypt949_L3_I035	Y
ypt950_L5_I036	T
ypt951	Y
ypt952	C
ypt953	Y
ypt954	Y
ypt955	Y
ypt956x	T
ypt957	T
ypt958	Y
ypt959	T
ypt960	T
ypt961	C
ypt962	Y
ypt963	C
ypt964	Y
ypt965	C
ypt966	C
ypt971	C
ypt972x	C
ypt973_L4_I037	Y
ypt974	Y
ypt975_L8_I039	T
ypt976_L7_I040	Y
ypt977_L2_I041	C
ypt978_L2_I052	T
ypt979_L6_I042	T
ypt980_L3_I043	C
ypt981_L2_I044	T
ypt982_L4_I045	Y
ypt984	T
yptwj	T
147209	T
147830	T
GLF_denovo	T
Gallus_Sonneriatii_d	T
Ypt4000	T
Ypt4879	T
Ypt4880	T