ChickenSD

ChickenSD / Individual SNP / ggaS0017001448569

Detail information of ggaS0017001448569

1.General Information

SNP ID: ggaS0017001448569
Organism: Gallus gallus
Individual: 116S_L6_I038

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: T

3.Reference Map information

Chrom Position Reference 116S_L6_I038
chr16 1221 G T

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0017001448569 ENSGALG00000027865 CD1.2 upstream_gene_variant => =>
ggaS0017001448569 ENSGALG00000012494 CD1A1 upstream_gene_variant => =>
ggaS0017001448569 ENSGALG00000012494 CD1A1 upstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S K
101S_L1_I028 G
102S_L3_I037 G
103S G
104S_L7_I029 G
105S_L3_I039 G
106S_L6_I030 G
107S_L2_I031 T
108S_L6_I032 G
109S_L5_I033 K
10S_L1_I052 K
110S_L4_I034 K
111S_L3_I047 K
112S_L3_I035 K
113S_L1_I036 G
114S_L3_I037 G
117S_L2_I039 K
118S_L4_I040 G
119S_L3_I041 G
11S K
120S_L1_I041 K
121S_L3_I042 G
122S_L4_I043 K
123S_L4_I044 K
124S_L2_I048 G
125S_L3_I050 G
126S_L3_I051 G
127S_L2_I045 G
128S_L1_I042 G
129S_L3_I043 G
12S_L4_I011 G
130S_L4_I044 G
131S_L2_I045 G
132S_L2_I046 K
133S_L8_I046 G
134S_L2_I047 K
135S_L3_I048 G
13S_L7_I012 G
14S_L2_I021 G
15S_L6_I022 G
16S_L5_I023 K
17S_L3_I024 K
18833 G
18S_L7_I025 K
19297 K
19912 G
19S_L4_I026 K
1S K
20736 G
20S_L7_I027 T
21S_L6_I028 G
22S_L6_I029 G
23S_L2_I030 G
25S_L3_I032 G
26S G
27S_L4_I034 G
28S_L4_I035 G
29S_L3_I036 G
2S T
30S_L2_I037 K
31S_L3_I038 G
32S_L1_I039 G
33S K
35S_L5_I041 K
36S_L5_I042 K
37S_L2_I043 K
38S_L6_I044 G
39S_L6_I053 G
3S_L4_I003 K
40S_L2_I054 K
41S_L5_I045 G
42S_L3_I055 G
43S G
44S_L4_I001 G
45S_L2_I002 G
46S_L4_I003 G
47S_L3_I046 G
48S_L1_I004 K
49S_L1_I005 G
4S_L4_I004 K
50S_L1_I047 G
51S_L6_I048 K
52S_L2_I050 G
53S_L2_I006 K
54S_L2_I007 G
55S_L1_I008 G
56S_L1_I010 K
57S_L3_I046 G
58S_L4_I051 G
59S_L5_I052 G
5S K
60S_L5_I053 G
61S_L8_I054 G
62S_L8_I055 K
63S_L5_I056 G
64S_L4_I001 G
65S_L5_I002 G
66S_L2_I003 G
67S_L1_I011 G
68S_L3_I012 G
69S G
6S K
70S T
71S_L3_I023 K
72S_L1_I024 G
73S_L1_I025 K
74S_L4_I026 K
75S_L3_I027 G
76S_L1_I028 G
77S_L4_I029 G
78S_L4_I030 K
79S_L2_I031 G
7S_L4_I007 G
80S_L3_I004 G
81S_L1_I005 G
82S T
83S_L3_I033 K
84S_L5_I006 G
85S_L5_I007 G
86S_L5_I008 K
87S_L5_I010 G
88S_L4_I011 G
89S_L6_I012 G
90S_L4_I021 G
92S_L5_I023 G
93S_L7_I024 K
95S_L8_I025 K
96S_L4_I026 G
97S_L8_I027 G
98S_L3_I034 G
99S_L2_I035 G
9S K
A1 K
A10 G
A12 G
A14 G
A3 G
A8 K
BKL2 G
BLB1_L2_I007 G
BLB2_L2_I008 G
BLO15 G
BLO2 G
BLO3_L4_I022 G
BOJA2 G
BYW3_L3_I033 G
GVF G
India1 K
India11 G
India13 K
India15 G
India17 K
India19 T
India21 G
India23 G
India25 G
India27 G
India29 T
India31 G
India37 G
India39 G
India41 G
India43 G
India47 G
India5 G
India51 G
India55 G
India57 G
India59 G
India61 G
India7 G
L2 G
N1 G
N11 G
N13 G
N18 G
N3 G
N7 G
N8 G
S-f1_L4_I106 G
S-f2_I107 G
S-f3_I108 G
S-f4_L4_I109 G
S-m2_I102 G
S-m3_I103 G
S-m4_L2_I104 G
S-m5_I105 G
S6 G
SAMN02486156 G
SAMN02486157 K
SAMN02486158 T
SAMN02486159 T
SAMN02486160 G
SAMN02486161 K
SAMN02486162 G
SAMN02486163 K
SAMN02486164 K
SAMN02486165 G
SAMN02486166 G
SAMN02486167 G
Silkia G
T2 G
T3 G
T5 G
TD1 G
TD12 G
TD22 G
TD27 K
TD30 G
TD6 G
TD9 K
Tibet G
Xcelris_10 G
Xcelris_101 K
Xcelris_104 T
Xcelris_105 G
Xcelris_10A T
Xcelris_10B G
Xcelris_112 T
Xcelris_114 G
Xcelris_11B G
Xcelris_12 K
Xcelris_120 K
Xcelris_127 G
Xcelris_128 K
Xcelris_129 T
Xcelris_12A G
Xcelris_137 G
Xcelris_141 G
Xcelris_144 K
Xcelris_14A G
Xcelris_14B G
Xcelris_174 T
Xcelris_175 T
Xcelris_176 T
Xcelris_1A G
Xcelris_1B G
Xcelris_219 K
Xcelris_221 G
Xcelris_222 G
Xcelris_224 G
Xcelris_226 G
Xcelris_227 G
Xcelris_278 G
Xcelris_280 T
Xcelris_2A K
Xcelris_2B G
Xcelris_332 G
Xcelris_333 K
Xcelris_335 G
Xcelris_336 G
Xcelris_339 G
Xcelris_340 G
Xcelris_341 G
Xcelris_377 G
Xcelris_378 K
Xcelris_379 G
Xcelris_380 G
Xcelris_381 G
Xcelris_382 K
Xcelris_383 G
Xcelris_384 G
Xcelris_385 G
Xcelris_392 G
Xcelris_394 G
Xcelris_4B G
Xcelris_5 T
Xcelris_5A G
Xcelris_5B G
Xcelris_6A G
Xcelris_6B K
Xcelris_7 G
Xcelris_77 G
Xcelris_84 G
Xcelris_8A K
Xcelris_90 G
Xcelris_97 T
Xcelris_98 T
Xcelris_MT-134 G
Xcelris_MT-38 G
Xcelris_MT-85 G
Xcelris_MT-99 G
Y1-f1_L5_I119 K
Y1-f2_L6_I121 G
Y1-f3_L7_I101 K
Y1-m1_L6_I120 G
Y1-m2_L4_I122 G
Y1-m3_L7_I123 G
Y1-m4_I124 K
Y1-m5_L7_I102 G
YPt565 G
YPt601 G
YPt604 K
YPt609 G
YPt610 G
YPt637 G
YPt641 G
YPt648 G
You1 T
You3_L7_I1000005 K
Ypt566 G
Ypt567 G
Ypt568 G
Ypt569 G
Ypt570 G
Ypt571 G
Ypt572 G
Ypt573 G
Ypt574 G
Ypt575 G
Ypt576 G
Ypt577 K
Ypt578 G
Ypt579 G
Ypt580 G
Ypt581 G
Ypt582 K
Ypt583 G
Ypt584 G
Ypt585 G
Ypt586 G
Ypt587 G
Ypt588 G
Ypt589 G
Ypt590 G
Ypt591 G
Ypt592 G
Ypt593 G
Ypt594 G
Ypt595 G
Ypt597 G
Ypt598 G
Ypt599 G
Ypt600 G
Ypt602 G
Ypt603 G
Ypt606 T
Ypt607 G
Ypt608 G
Ypt622 G
Ypt623 G
Ypt624 G
Ypt626 G
Ypt638 G
Ypt640 G
Ypt642 G
Ypt643 G
Ypt645 G
Ypt646 K
Ypt647 G
Yt516 G
Yt517 G
Yt518 K
Yt519 G
Yt520 G
Yt521 G
Yt522 G
Yt523 G
Yt524 G
Yt525 G
Yt526 G
Yt527 G
Yt528 G
Yt529 G
Yt530 G
Yt531 G
Yt536 K
Yt538 G
Yt539 G
Yt540 K
ZJ1 G
ZJ2 G
ZJ3 G
ZJ4 G
india3 G
india49 K
production K
ypt169_L3_I011 G
ypt170_L2_I012 G
ypt171_L2_I021 G
ypt173_L2_I022 G
ypt175_L2_I023 G
ypt2041_L6_I002 G
ypt2043_L1_I037 G
ypt2051_L3_I003 G
ypt2053_L6_I004 G
ypt2063_L6_I005 G
ypt2069_L6_I006 G
ypt2071_L1_I038 G
ypt2082 G
ypt2086 G
ypt2087 G
ypt2091 G
ypt2092 G
ypt2093 G
ypt2094 G
ypt2095 G
ypt2098 G
ypt2100 G
ypt2101 G
ypt2102 G
ypt2103 G
ypt2105 G
ypt2106 K
ypt2107 G
ypt2108 G
ypt2109 G
ypt2111 G
ypt2112 T
ypt2114 G
ypt2115 G
ypt2116 G
ypt2117 G
ypt2118 G
ypt2119 G
ypt2120 G
ypt2121 G
ypt2122 G
ypt2124_L4_I052 K
ypt2126_L3_I053 G
ypt2127_L1_I036 K
ypt2144_L6_I055 G
ypt2145_L6_I056 T
ypt2146_L6_I001 G
ypt2163 G
ypt2164 G
ypt2165 G
ypt2166 G
ypt2167 G
ypt2168 G
ypt2169 G
ypt2171 G
ypt2173 G
ypt2174 G
ypt2175 G
ypt2176 K
ypt2177 K
ypt2178 G
ypt217_L2_I024 G
ypt2184 G
ypt2185 G
ypt2187 G
ypt2189 G
ypt2190 G
ypt2191 G
ypt219_L3_I025 T
ypt2200 K
ypt2201 G
ypt2205 G
ypt2209 K
ypt220_L2_I026 G
ypt2214 G
ypt2215 T
ypt2216 G
ypt2217 G
ypt2218 G
ypt2219 G
ypt221_L3_I042 K
ypt2220 G
ypt2221 G
ypt2222 G
ypt222_L3_I027 G
ypt2437 G
ypt2438 G
ypt2439 T
ypt2440 G
ypt2441 K
ypt2442 K
ypt2443 K
ypt2444 K
ypt2445 K
ypt2446 G
ypt2447 G
ypt2449 K
ypt2454 G
ypt2459 G
ypt2468 K
ypt2496 K
ypt2497 G
ypt2498 K
ypt2499 K
ypt2500 G
ypt2503 G
ypt2504 G
ypt2507 G
ypt2512 G
ypt2516 G
ypt2521 G
ypt2523 G
ypt2534 G
ypt2541 K
ypt2543 G
ypt2544 K
ypt2545 G
ypt2546 G
ypt2547 G
ypt2552 G
ypt2562 K
ypt2563 K
ypt2569 G
ypt2570 K
ypt2571 K
ypt2572 G
ypt2573 K
ypt2574 K
ypt2575 G
ypt2579 T
ypt258_L3_I028 G
ypt2598 G
ypt259_L2_I029 G
ypt2606 G
ypt2608 G
ypt2615 G
ypt2622 G
ypt2623 G
ypt2624 T
ypt2625 K
ypt2627 G
ypt2628 G
ypt2629 K
ypt262_L3_I030 K
ypt2630 K
ypt2636 K
ypt2638 G
ypt263_L3_I031 G
ypt2640 K
ypt2641 K
ypt2643 G
ypt2644 G
ypt2646 G
ypt264_L3_I032 G
ypt2650 G
ypt2653 G
ypt2656 G
ypt2657 K
ypt2658 G
ypt2661 K
ypt2664 G
ypt2665 K
ypt2669 G
ypt2670 K
ypt2671 G
ypt2672 G
ypt2673 K
ypt2678 G
ypt2706 G
ypt2722 G
ypt2724 K
ypt2729 G
ypt2733 G
ypt2739 K
ypt2740 G
ypt2745 G
ypt2746 G
ypt2760 G
ypt2761 G
ypt2765 G
ypt2766 G
ypt2775 K
ypt2780 T
ypt2781 K
ypt2782 G
ypt2783 K
ypt2784 K
ypt2785 G
ypt2786 G
ypt2787 G
ypt2788 K
ypt2789 G
ypt2790 G
ypt2791 G
ypt2792 G
ypt2799 T
ypt2800 K
ypt2808 G
ypt2810 G
ypt2812 K
ypt2813 G
ypt2814 G
ypt2815 G
ypt2816 G
ypt2819 G
ypt2821 K
ypt2822 K
ypt2823 G
ypt2824 G
ypt2825 G
ypt2826 G
ypt2827 K
ypt2828 K
ypt2831 G
ypt2832 G
ypt2842 G
ypt2843 G
ypt2849 K
ypt2859 G
ypt2860 G
ypt2861 G
ypt2870 G
ypt2871 G
ypt2887 G
ypt2888 G
ypt2889 G
ypt2891_L3_I041 G
ypt2892 K
ypt2893_L3_I025 G
ypt2894 K
ypt2895_L3_I026 G
ypt2902 K
ypt2909 T
ypt2910 G
ypt2911 G
ypt2912 G
ypt2918 G
ypt2929 T
ypt2930 G
ypt3003 G
ypt3004 G
ypt3005 G
ypt3006 G
ypt3008 G
ypt3009 G
ypt3010 G
ypt3011 G
ypt3012 G
ypt3016 G
ypt3017 G
ypt3028 G
ypt3040 G
ypt3041 G
ypt3042 G
ypt3043 G
ypt3044 G
ypt3045 G
ypt3047 G
ypt3050 G
ypt3051 G
ypt3052 G
ypt3061 G
ypt3069 G
ypt3133 G
ypt3134 G
ypt3135 G
ypt3136 G
ypt3137 G
ypt3138 G
ypt3139 K
ypt3140 T
ypt3141 T
ypt3142 G
ypt3143 K
ypt3144_L3_I039 G
ypt3145 K
ypt3146 K
ypt3149_L2_I034 G
ypt3150_L8_I023 G
ypt3159_L6_I035 G
ypt3160_L8_I024 G
ypt3162_L6_I036 G
ypt3179_L8_I025 G
ypt3180 G
ypt3181_L7_I038 G
ypt3182_L1_I039 G
ypt3190_L8_I026 G
ypt3191_L2_I041 K
ypt3193_L1_I027 G
ypt3195_L1_I042 G
ypt3196_L2_I043 K
ypt3197_L1_I044 G
ypt3198_L2_I045 G
ypt3204_L7_I046 K
ypt3205_L2_I047 T
ypt3206_L1_I048 G
ypt3207_L6_I050 T
ypt3210_L6_I051 G
ypt3211_L6_I052 T
ypt3213_L8_I029 G
ypt3219_L1_I030 G
ypt3220_L1_I031 K
ypt3221_L1_I032 K
ypt3222_L1_I033 G
ypt3224_L8_I043 K
ypt3225_L2_I053 T
ypt3226_L3_I044 G
ypt3229_L8_I045 G
ypt3240_L6_I054 G
ypt3245 K
ypt3246_L6_I050 G
ypt3247_L6_I051 G
ypt3257_L1_I056 T
ypt3258_L3_I001 T
ypt3259_L6_I002 T
ypt3260_L6_I003 G
ypt3261_L7_I004 G
ypt3262_L7_I005 K
ypt3269_L7_I006 G
ypt3270_L1_I007 G
ypt3271_L7_I008 G
ypt3272_L7_I010 G
ypt3274A_L7_I011 G
ypt3277_L6_I027 G
ypt3289_L8_I021 T
ypt47_L2_I029 K
ypt50_L2_I030 G
ypt55_L1_I033 G
ypt890 K
ypt891 G
ypt896_L2_I047 G
ypt897_L3_I048 G
ypt898 G
ypt899_L6_I051 G
ypt901_L1_I052 G
ypt902_L1_I053 K
ypt903_L2_I054 G
ypt904_L4_I055 G
ypt905_L6_I056 G
ypt906_L3_I001 K
ypt907_L6_I002 G
ypt908_L1_I003 G
ypt909_L5_I004 G
ypt910_L3_I005 G
ypt911_L6_I006 G
ypt915 G
ypt916 T
ypt917 G
ypt918_L3_I007 G
ypt920_L5_I010 G
ypt921_L8_I011 K
ypt922_L4_I012 G
ypt923_L2_I051 G
ypt925_L2_I022 G
ypt926_L2_I023 K
ypt929 G
ypt930 T
ypt931 T
ypt932 G
ypt934x G
ypt938x G
ypt940_L4_I026 G
ypt941_L5_I027 K
ypt942_L7_I028 G
ypt943 K
ypt944_L3_I030 G
ypt945_L4_I031 G
ypt946_L4_I032 G
ypt947_L5_I033 K
ypt948_L2_I034 G
ypt949_L3_I035 G
ypt950_L5_I036 G
ypt951 K
ypt952 G
ypt953 G
ypt954 G
ypt955 G
ypt956x G
ypt957 T
ypt958 K
ypt959 G
ypt960 G
ypt961 G
ypt962 G
ypt963 G
ypt964 G
ypt965 G
ypt966 G
ypt971 G
ypt972x G
ypt973_L4_I037 G
ypt974 K
ypt975_L8_I039 G
ypt976_L7_I040 G
ypt977_L2_I041 G
ypt978_L2_I052 G
ypt979_L6_I042 K
ypt980_L3_I043 G
ypt981_L2_I044 G
ypt982_L4_I045 G
ypt984 G
yptwj G
147209 G
147830 G
GLF_denovo G
Gallus_Sonneriatii_d G
Ypt4000 G
Ypt4879 G
Ypt4880 G