ChickenSD

ChickenSD / Individual SNP / ggaS0014000000009

Detail information of ggaS0014000000009

1.General Information

SNP ID: ggaS0014000000009
Organism: Gallus gallus
Individual: 112S_L3_I035

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 112S_L3_I035
chr1 4411 T C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0014000000009 ENSGALG00000009771 - intron_variant => =>

5.Individual Genotype

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Individual Genotype
100S Y
101S_L1_I028 Y
102S_L3_I037 T
103S T
104S_L7_I029 Y
105S_L3_I039 T
106S_L6_I030 T
107S_L2_I031 Y
108S_L6_I032 Y
109S_L5_I033 Y
110S_L4_I034 Y
111S_L3_I047 Y
113S_L1_I036 T
114S_L3_I037 Y
116S_L6_I038 T
117S_L2_I039 Y
118S_L4_I040 T
119S_L3_I041 T
120S_L1_I041 Y
121S_L3_I042 T
122S_L4_I043 T
124S_L2_I048 Y
125S_L3_I050 T
126S_L3_I051 Y
128S_L1_I042 T
129S_L3_I043 T
12S_L4_I011 T
130S_L4_I044 Y
131S_L2_I045 T
132S_L2_I046 T
134S_L2_I047 Y
135S_L3_I048 T
13S_L7_I012 Y
14S_L2_I021 T
15S_L6_I022 T
16S_L5_I023 T
17S_L3_I024 T
18833 T
18S_L7_I025 Y
19297 T
19912 T
19S_L4_I026 T
1S T
20736 T
20S_L7_I027 Y
21S_L6_I028 Y
22S_L6_I029 T
23S_L2_I030 Y
24S_L4_I031 T
25S_L3_I032 C
26S Y
27S_L4_I034 Y
28S_L4_I035 Y
29S_L3_I036 Y
2S Y
30S_L2_I037 T
31S_L3_I038 Y
32S_L1_I039 Y
33S C
35S_L5_I041 Y
36S_L5_I042 T
37S_L2_I043 Y
38S_L6_I044 C
39S_L6_I053 T
3S_L4_I003 T
40S_L2_I054 T
41S_L5_I045 T
42S_L3_I055 T
43S T
44S_L4_I001 Y
46S_L4_I003 Y
47S_L3_I046 T
48S_L1_I004 T
49S_L1_I005 T
4S_L4_I004 T
51S_L6_I048 C
52S_L2_I050 T
53S_L2_I006 T
54S_L2_I007 T
55S_L1_I008 Y
56S_L1_I010 Y
57S_L3_I046 T
58S_L4_I051 T
59S_L5_I052 T
5S T
60S_L5_I053 T
61S_L8_I054 T
62S_L8_I055 T
63S_L5_I056 Y
64S_L4_I001 Y
65S_L5_I002 Y
66S_L2_I003 T
67S_L1_I011 Y
68S_L3_I012 Y
69S T
6S T
70S Y
71S_L3_I023 Y
72S_L1_I024 Y
73S_L1_I025 T
74S_L4_I026 Y
76S_L1_I028 T
77S_L4_I029 Y
78S_L4_I030 Y
79S_L2_I031 Y
7S_L4_I007 Y
80S_L3_I004 T
81S_L1_I005 C
82S T
83S_L3_I033 Y
84S_L5_I006 T
85S_L5_I007 T
86S_L5_I008 T
87S_L5_I010 T
88S_L4_I011 T
89S_L6_I012 T
92S_L5_I023 T
93S_L7_I024 T
95S_L8_I025 T
97S_L8_I027 T
98S_L3_I034 T
99S_L2_I035 T
9S T
A1 Y
A10 Y
A12 Y
A14 T
A3 T
A8 Y
BKL2 Y
BLB1_L2_I007 Y
BLB2_L2_I008 Y
BLO1 C
BLO11 Y
BLO15 Y
BLO2 Y
BLO3_L4_I022 T
BOJA2 Y
BYW3_L3_I033 Y
BYW5_L2_I010 C
GVF C
India1 Y
India11 Y
India13 Y
India15 Y
India17 Y
India19 T
India21 T
India23 Y
India25 T
India27 T
India29 Y
India31 Y
India33 Y
India35 Y
India37 T
India39 Y
India41 T
India43 T
India45 Y
India47 T
India5 Y
India51 Y
India55 Y
India57 Y
India59 T
India61 T
India7 Y
India9 Y
L2 Y
N1 T
N11 Y
N13 T
N18 Y
N3 Y
N5 Y
N7 T
N8 Y
S-f1_L4_I106 T
S-f2_I107 Y
S-f3_I108 T
S-f4_L4_I109 T
S-m1_I101 T
S-m2_I102 Y
S-m3_I103 T
S-m4_L2_I104 T
S-m5_I105 Y
S6 Y
SAMN02486156 T
SAMN02486157 Y
SAMN02486158 T
SAMN02486159 T
SAMN02486160 Y
SAMN02486161 Y
SAMN02486162 Y
SAMN02486163 T
SAMN02486164 T
SAMN02486165 Y
SAMN02486166 T
SAMN02486167 Y
Silkia T
T2 T
T3 T
T5 Y
TD1 T
TD12 Y
TD15 Y
TD22 Y
TD27 T
TD30 Y
TD6 Y
TD9 Y
Tibet T
Xcelris_10 T
Xcelris_101 T
Xcelris_104 Y
Xcelris_105 T
Xcelris_10A T
Xcelris_10B Y
Xcelris_112 T
Xcelris_113 T
Xcelris_114 T
Xcelris_11B Y
Xcelris_12 T
Xcelris_120 T
Xcelris_127 T
Xcelris_128 T
Xcelris_129 T
Xcelris_12A Y
Xcelris_13 T
Xcelris_13B Y
Xcelris_14 T
Xcelris_141 T
Xcelris_142 T
Xcelris_143 T
Xcelris_144 T
Xcelris_14A Y
Xcelris_14B T
Xcelris_174 T
Xcelris_176 T
Xcelris_1A T
Xcelris_1B T
Xcelris_219 T
Xcelris_221 T
Xcelris_222 T
Xcelris_224 T
Xcelris_226 T
Xcelris_227 T
Xcelris_278 T
Xcelris_279 T
Xcelris_2A Y
Xcelris_2B Y
Xcelris_331 T
Xcelris_333 T
Xcelris_335 Y
Xcelris_336 T
Xcelris_339 T
Xcelris_340 T
Xcelris_341 T
Xcelris_377 T
Xcelris_378 T
Xcelris_379 T
Xcelris_380 T
Xcelris_381 T
Xcelris_382 Y
Xcelris_383 T
Xcelris_384 T
Xcelris_385 T
Xcelris_392 T
Xcelris_394 T
Xcelris_44 T
Xcelris_4A T
Xcelris_4B T
Xcelris_5 T
Xcelris_5A T
Xcelris_5B T
Xcelris_67 T
Xcelris_6A Y
Xcelris_6B T
Xcelris_7 T
Xcelris_77 T
Xcelris_8 T
Xcelris_84 T
Xcelris_8A T
Xcelris_8B T
Xcelris_90 T
Xcelris_97 T
Xcelris_98 T
Xcelris_MT-134 T
Xcelris_MT-18 T
Xcelris_MT-48 T
Xcelris_MT-6 T
Xcelris_MT-85 Y
Xcelris_MT-9 T
Xcelris_MT-99 T
Y1-f1_L5_I119 T
Y1-f2_L6_I121 Y
Y1-f3_L7_I101 Y
Y1-m1_L6_I120 T
Y1-m2_L4_I122 T
Y1-m3_L7_I123 T
Y1-m4_I124 Y
Y1-m5_L7_I102 T
YPt565 T
YPt601 Y
YPt604 T
YPt609 Y
YPt637 Y
YPt641 T
YPt648 T
Ypt566 Y
Ypt567 T
Ypt568 T
Ypt569 T
Ypt570 T
Ypt571 T
Ypt572 T
Ypt574 Y
Ypt575 T
Ypt576 T
Ypt577 Y
Ypt578 Y
Ypt579 T
Ypt580 Y
Ypt581 T
Ypt582 T
Ypt583 Y
Ypt584 T
Ypt585 Y
Ypt586 Y
Ypt587 Y
Ypt588 Y
Ypt589 T
Ypt590 T
Ypt592 Y
Ypt593 Y
Ypt594 Y
Ypt595 T
Ypt596 C
Ypt597 C
Ypt598 T
Ypt599 Y
Ypt600 C
Ypt602 T
Ypt603 T
Ypt606 Y
Ypt607 Y
Ypt608 T
Ypt622 T
Ypt623 T
Ypt624 T
Ypt626 T
Ypt638 Y
Ypt642 Y
Ypt643 Y
Ypt645 Y
Ypt646 T
Ypt647 Y
Yt516 Y
Yt517 T
Yt518 Y
Yt519 T
Yt520 T
Yt521 T
Yt522 T
Yt523 T
Yt524 T
Yt525 T
Yt526 Y
Yt527 Y
Yt528 T
Yt529 Y
Yt530 T
Yt531 Y
Yt536 T
Yt538 Y
Yt539 T
Yt540 T
ZJ1 T
ZJ2 Y
ZJ3 Y
ZJ4 Y
india3 T
india49 T
production T
yp914ypt Y
ypt169_L3_I011 Y
ypt170_L2_I012 Y
ypt171_L2_I021 T
ypt173_L2_I022 T
ypt175_L2_I023 Y
ypt2041_L6_I002 T
ypt2051_L3_I003 Y
ypt2053_L6_I004 Y
ypt2063_L6_I005 Y
ypt2069_L6_I006 Y
ypt2071_L1_I038 T
ypt2082 T
ypt2086 Y
ypt2087 T
ypt2091 T
ypt2092 T
ypt2093 Y
ypt2094 T
ypt2095 T
ypt2098 T
ypt2100 Y
ypt2101 T
ypt2102 T
ypt2103 T
ypt2105 T
ypt2106 T
ypt2107 T
ypt2108 T
ypt2109 T
ypt2110 Y
ypt2111 Y
ypt2112 T
ypt2114 T
ypt2115 T
ypt2116 T
ypt2117 Y
ypt2118 T
ypt2119 T
ypt2120 T
ypt2121 Y
ypt2122 T
ypt2124_L4_I052 Y
ypt2126_L3_I053 T
ypt2127_L1_I036 T
ypt2128_L6_I054 T
ypt2144_L6_I055 Y
ypt2145_L6_I056 Y
ypt2146_L6_I001 T
ypt2163 Y
ypt2164 Y
ypt2165 T
ypt2166 T
ypt2167 Y
ypt2168 Y
ypt2169 Y
ypt2170 Y
ypt2171 T
ypt2172 Y
ypt2173 T
ypt2174 T
ypt2175 T
ypt2176 Y
ypt2177 T
ypt2178 T
ypt217_L2_I024 Y
ypt2184 Y
ypt2185 Y
ypt2186 Y
ypt2187 Y
ypt2189 Y
ypt2190 T
ypt2191 Y
ypt219_L3_I025 T
ypt2200 Y
ypt2201 T
ypt2205 Y
ypt2209 Y
ypt220_L2_I026 T
ypt2214 T
ypt2215 T
ypt2216 Y
ypt2217 Y
ypt2218 Y
ypt2219 Y
ypt221_L3_I042 Y
ypt2220 Y
ypt2221 T
ypt2222 T
ypt222_L3_I027 Y
ypt2437 T
ypt2438 T
ypt2439 Y
ypt2440 Y
ypt2441 Y
ypt2443 Y
ypt2444 Y
ypt2445 T
ypt2446 T
ypt2447 Y
ypt2448 T
ypt2449 Y
ypt2454 T
ypt2459 T
ypt2496 Y
ypt2497 T
ypt2498 T
ypt2500 Y
ypt2503 T
ypt2504 Y
ypt2512 T
ypt2516 T
ypt2521 T
ypt2523 Y
ypt2534 T
ypt2541 T
ypt2544 Y
ypt2545 T
ypt2546 Y
ypt2547 T
ypt2552 T
ypt2562 T
ypt2563 T
ypt2569 T
ypt2570 Y
ypt2571 T
ypt2572 T
ypt2573 T
ypt2574 T
ypt2575 T
ypt2579 Y
ypt258_L3_I028 Y
ypt2598 T
ypt259_L2_I029 Y
ypt2601 T
ypt2606 C
ypt2608 Y
ypt2615 Y
ypt2622 Y
ypt2623 Y
ypt2624 Y
ypt2625 T
ypt2627 Y
ypt2628 Y
ypt2629 C
ypt262_L3_I030 Y
ypt2630 T
ypt2636 Y
ypt2638 C
ypt263_L3_I031 T
ypt2640 T
ypt2641 T
ypt2643 T
ypt2644 T
ypt2646 T
ypt264_L3_I032 Y
ypt2653 Y
ypt2656 T
ypt2657 T
ypt2658 T
ypt2661 T
ypt2665 C
ypt2669 T
ypt2670 T
ypt2671 T
ypt2672 Y
ypt2673 Y
ypt2678 T
ypt2706 T
ypt2722 T
ypt2724 T
ypt2729 T
ypt2733 T
ypt2739 T
ypt2740 Y
ypt2745 Y
ypt2746 Y
ypt2760 T
ypt2761 Y
ypt2765 Y
ypt2766 T
ypt2775 T
ypt2780 Y
ypt2781 Y
ypt2782 Y
ypt2783 T
ypt2784 Y
ypt2786 T
ypt2787 Y
ypt2788 Y
ypt2789 Y
ypt2790 Y
ypt2791 T
ypt2792 C
ypt2799 T
ypt2800 Y
ypt2808 T
ypt2810 T
ypt2812 T
ypt2813 T
ypt2814 T
ypt2815 T
ypt2819 T
ypt2821 T
ypt2822 T
ypt2824 T
ypt2825 T
ypt2826 T
ypt2827 T
ypt2828 Y
ypt2831 Y
ypt2832 Y
ypt2842 T
ypt2843 T
ypt2849 Y
ypt2859 Y
ypt2860 Y
ypt2861 Y
ypt2862 C
ypt2863 Y
ypt2870 Y
ypt2871 Y
ypt2887 T
ypt2888 Y
ypt2889 Y
ypt2890_L3_I040 C
ypt2891_L3_I041 C
ypt2892 Y
ypt2893_L3_I025 Y
ypt2894 Y
ypt2895_L3_I026 Y
ypt2902 Y
ypt2909 T
ypt2910 T
ypt2911 Y
ypt2912 T
ypt2918 T
ypt2929 Y
ypt2930 Y
ypt3001 Y
ypt3002 Y
ypt3003 T
ypt3004 Y
ypt3005 T
ypt3006 T
ypt3007 Y
ypt3008 T
ypt3009 Y
ypt3010 Y
ypt3011 Y
ypt3012 Y
ypt3016 T
ypt3017 T
ypt3028 Y
ypt3038 Y
ypt3040 Y
ypt3041 T
ypt3042 Y
ypt3043 T
ypt3044 Y
ypt3045 Y
ypt3046 Y
ypt3047 T
ypt3050 Y
ypt3051 T
ypt3052 Y
ypt3061 T
ypt3069 T
ypt3072 T
ypt3133 Y
ypt3134 T
ypt3135 T
ypt3136 Y
ypt3137 Y
ypt3138 T
ypt3139 Y
ypt3140 T
ypt3141 T
ypt3142 Y
ypt3143 Y
ypt3144_L3_I039 Y
ypt3145 T
ypt3146 T
ypt3149_L2_I034 Y
ypt3150_L8_I023 T
ypt3159_L6_I035 Y
ypt3160_L8_I024 T
ypt3162_L6_I036 T
ypt3179_L8_I025 T
ypt3180 Y
ypt3181_L7_I038 T
ypt3182_L1_I039 Y
ypt3189_L1_I040 Y
ypt3190_L8_I026 Y
ypt3191_L2_I041 T
ypt3193_L1_I027 Y
ypt3195_L1_I042 Y
ypt3196_L2_I043 Y
ypt3197_L1_I044 T
ypt3198_L2_I045 T
ypt3204_L7_I046 T
ypt3205_L2_I047 Y
ypt3206_L1_I048 T
ypt3207_L6_I050 T
ypt3210_L6_I051 Y
ypt3211_L6_I052 T
ypt3212_L4_I028 T
ypt3213_L8_I029 T
ypt3219_L1_I030 Y
ypt3220_L1_I031 T
ypt3221_L1_I032 T
ypt3222_L1_I033 T
ypt3224_L8_I043 T
ypt3225_L2_I053 T
ypt3226_L3_I044 Y
ypt3228-7_L1_I034 T
ypt3238_L3_I046 Y
ypt3239_L1_I035 T
ypt3240_L6_I054 T
ypt3241_L6_I055 T
ypt3243_L8_I047 T
ypt3245 T
ypt3246_L6_I050 Y
ypt3247_L6_I051 T
ypt3257_L1_I056 T
ypt3259_L6_I002 T
ypt3260_L6_I003 T
ypt3261_L7_I004 T
ypt3262_L7_I005 T
ypt3269_L7_I006 T
ypt3270_L1_I007 T
ypt3271_L7_I008 T
ypt3272_L7_I010 T
ypt3274A_L7_I011 T
ypt3277_L6_I027 T
ypt3278_L3_I028 T
ypt47_L2_I029 Y
ypt50_L2_I030 Y
ypt53_L2_I032 T
ypt890 T
ypt891 Y
ypt896_L2_I047 T
ypt897_L3_I048 T
ypt898 T
ypt899_L6_I051 T
ypt901_L1_I052 T
ypt902_L1_I053 T
ypt903_L2_I054 T
ypt904_L4_I055 T
ypt905_L6_I056 T
ypt906_L3_I001 Y
ypt907_L6_I002 T
ypt908_L1_I003 T
ypt909_L5_I004 T
ypt910_L3_I005 T
ypt911_L6_I006 T
ypt912 T
ypt913 T
ypt915 T
ypt916 T
ypt917 T
ypt918_L3_I007 T
ypt919_L4_I008 T
ypt920_L5_I010 Y
ypt921_L8_I011 T
ypt922_L4_I012 T
ypt923_L2_I051 T
ypt924_L3_I021 T
ypt925_L2_I022 T
ypt926_L2_I023 T
ypt928 T
ypt929 T
ypt930 T
ypt931 T
ypt932 T
ypt933 T
ypt936 T
ypt937 T
ypt938x Y
ypt939_L5_I025 T
ypt940_L4_I026 T
ypt941_L5_I027 T
ypt942_L7_I028 Y
ypt943 Y
ypt944_L3_I030 T
ypt945_L4_I031 T
ypt946_L4_I032 T
ypt947_L5_I033 Y
ypt948_L2_I034 T
ypt949_L3_I035 T
ypt950_L5_I036 Y
ypt951 T
ypt952 Y
ypt954 Y
ypt955 T
ypt956x T
ypt959 Y
ypt960 T
ypt961 T
ypt962 T
ypt963 T
ypt964 T
ypt965 T
ypt971 Y
ypt972x T
ypt973_L4_I037 T
ypt974 Y
ypt975_L8_I039 Y
ypt976_L7_I040 T
ypt977_L2_I041 Y
ypt978_L2_I052 T
ypt979_L6_I042 T
ypt980_L3_I043 Y
ypt981_L2_I044 T
ypt982_L4_I045 Y
ypt984 Y
yptwj Y
147209 Y
147830 T
GLF_denovo T
Ypt4000 Y
Ypt4879 Y
Ypt4880 Y