ChickenSD

ChickenSD / Individual SNP / ggaS0013004646644

Detail information of ggaS0013004646644

1.General Information

SNP ID: ggaS0013004646644
Organism: Gallus gallus
Individual: 111S_L3_I047

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: T

3.Reference Map information

Chrom Position Reference 111S_L3_I047
chrW 7546 C T

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0013004646644 ENSGALG00000025736 - 3_prime_UTR_variant => =>

5.Individual Genotype

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Individual Genotype
103S T
108S_L6_I032 T
10S_L1_I052 T
113S_L1_I036 T
114S_L3_I037 T
116S_L6_I038 T
118S_L4_I040 C
119S_L3_I041 C
120S_L1_I041 C
121S_L3_I042 C
123S_L4_I044 C
124S_L2_I048 T
126S_L3_I051 C
127S_L2_I045 C
128S_L1_I042 T
129S_L3_I043 Y
130S_L4_I044 T
131S_L2_I045 C
132S_L2_I046 Y
133S_L8_I046 Y
134S_L2_I047 C
135S_L3_I048 C
13S_L7_I012 C
14S_L2_I021 C
15S_L6_I022 T
16S_L5_I023 C
18833 C
19912 C
19S_L4_I026 C
1S C
21S_L6_I028 C
22S_L6_I029 C
23S_L2_I030 T
24S_L4_I031 C
27S_L4_I034 C
28S_L4_I035 Y
29S_L3_I036 C
2S T
30S_L2_I037 T
31S_L3_I038 T
32S_L1_I039 T
33S Y
35S_L5_I041 T
38S_L6_I044 T
3S_L4_I003 Y
40S_L2_I054 C
41S_L5_I045 T
42S_L3_I055 C
45S_L2_I002 C
49S_L1_I005 T
4S_L4_I004 T
51S_L6_I048 T
54S_L2_I007 T
56S_L1_I010 T
57S_L3_I046 C
5S T
60S_L5_I053 T
63S_L5_I056 T
64S_L4_I001 T
65S_L5_I002 T
67S_L1_I011 T
68S_L3_I012 C
6S T
70S C
73S_L1_I025 T
75S_L3_I027 Y
76S_L1_I028 T
77S_L4_I029 Y
78S_L4_I030 C
7S_L4_I007 Y
80S_L3_I004 C
82S T
83S_L3_I033 T
84S_L5_I006 T
85S_L5_I007 T
86S_L5_I008 C
87S_L5_I010 C
90S_L4_I021 C
92S_L5_I023 Y
93S_L7_I024 C
96S_L4_I026 C
99S_L2_I035 C
9S T
A1 T
A10 T
A12 C
A14 Y
A3 Y
A8 T
BLO15 T
GVF T
India17 C
India23 C
India25 T
India27 C
India29 C
India31 C
India33 C
India37 C
India47 T
India5 Y
India51 C
India57 T
India59 C
India7 Y
L2 Y
N3 T
N7 T
N8 T
S-f2_I107 C
SAMN02486156 T
SAMN02486158 T
SAMN02486159 C
SAMN02486160 T
SAMN02486161 T
SAMN02486163 T
SAMN02486164 C
SAMN02486166 C
SAMN02486167 C
Silkia T
T3 T
T5 Y
TD12 T
TD15 C
TD22 C
TD30 C
TD9 T
Tibet Y
Xcelris_104 T
Xcelris_112 T
Xcelris_12 T
Xcelris_120 T
Xcelris_14 C
Xcelris_144 T
Xcelris_174 C
Xcelris_175 Y
Xcelris_176 C
Xcelris_1B Y
Xcelris_219 T
Xcelris_221 T
Xcelris_224 T
Xcelris_227 T
Xcelris_332 T
Xcelris_336 C
Xcelris_341 T
Xcelris_377 C
Xcelris_379 C
Xcelris_380 T
Xcelris_383 T
Xcelris_392 T
Xcelris_394 T
Xcelris_44 T
Xcelris_5A Y
Xcelris_5B T
Xcelris_67 T
Xcelris_6A T
Xcelris_6B T
Xcelris_77 T
Xcelris_8 T
Xcelris_8A C
Xcelris_8B C
Xcelris_97 C
Xcelris_MT-134 T
Xcelris_MT-18 T
Xcelris_MT-99 T
Y1-f1_L5_I119 T
Y1-m2_L4_I122 T
YPt610 C
YPt637 C
YPt641 T
YPt648 C
Ypt567 C
Ypt568 T
Ypt570 C
Ypt571 T
Ypt572 T
Ypt573 C
Ypt574 C
Ypt577 T
Ypt578 T
Ypt579 T
Ypt580 Y
Ypt583 C
Ypt584 T
Ypt585 T
Ypt587 T
Ypt588 T
Ypt589 T
Ypt598 C
Ypt599 C
Ypt606 Y
Ypt608 C
Ypt623 Y
Ypt626 T
Ypt638 C
Ypt642 Y
Ypt643 T
Ypt646 T
Yt516 C
Yt517 T
Yt518 C
Yt519 Y
Yt520 T
Yt521 Y
Yt523 T
Yt525 C
Yt527 T
Yt528 Y
Yt531 C
Yt536 C
Yt538 C
Yt539 Y
Yt540 T
ZJ1 C
ZJ3 T
ZJ4 C
india3 C
india49 C
production C
ypt169_L3_I011 C
ypt171_L2_I021 Y
ypt173_L2_I022 C
ypt175_L2_I023 T
ypt2041_L6_I002 C
ypt2043_L1_I037 C
ypt2071_L1_I038 C
ypt2082 T
ypt2086 T
ypt2092 C
ypt2095 Y
ypt2100 C
ypt2101 C
ypt2103 C
ypt2107 C
ypt2108 C
ypt2110 T
ypt2111 C
ypt2112 C
ypt2114 C
ypt2115 T
ypt2116 C
ypt2117 C
ypt2119 C
ypt2120 C
ypt2121 C
ypt2122 T
ypt2144_L6_I055 C
ypt2164 Y
ypt2165 Y
ypt2166 Y
ypt2167 C
ypt2169 C
ypt2170 T
ypt2171 Y
ypt2173 C
ypt2176 C
ypt2177 T
ypt2178 T
ypt217_L2_I024 T
ypt2184 T
ypt2185 C
ypt2187 Y
ypt2190 T
ypt2214 C
ypt2215 C
ypt2216 C
ypt2217 C
ypt2222 T
ypt2440 T
ypt2442 T
ypt2444 C
ypt2446 T
ypt2447 T
ypt2448 T
ypt2454 C
ypt2459 C
ypt2496 C
ypt2497 C
ypt2499 C
ypt2500 T
ypt2504 C
ypt2507 C
ypt2512 T
ypt2516 Y
ypt2523 T
ypt2534 C
ypt2541 Y
ypt2543 Y
ypt2544 C
ypt2545 C
ypt2546 C
ypt2547 C
ypt2552 T
ypt2562 C
ypt2569 C
ypt2572 C
ypt2573 C
ypt2574 C
ypt258_L3_I028 C
ypt2598 C
ypt259_L2_I029 T
ypt2601 C
ypt2615 C
ypt2622 Y
ypt2623 C
ypt2624 T
ypt2625 T
ypt2627 T
ypt2628 T
ypt2629 Y
ypt262_L3_I030 T
ypt2638 T
ypt2640 Y
ypt2641 C
ypt2643 T
ypt2644 C
ypt2650 C
ypt2658 T
ypt2661 T
ypt2665 T
ypt2671 T
ypt2673 T
ypt2678 C
ypt2724 T
ypt2729 T
ypt2740 T
ypt2745 T
ypt2746 T
ypt2761 T
ypt2765 C
ypt2775 T
ypt2780 C
ypt2783 T
ypt2785 Y
ypt2786 T
ypt2787 Y
ypt2788 C
ypt2790 Y
ypt2791 C
ypt2799 T
ypt2800 T
ypt2808 T
ypt2810 T
ypt2812 C
ypt2813 C
ypt2816 C
ypt2819 Y
ypt2821 C
ypt2823 C
ypt2826 C
ypt2827 T
ypt2828 T
ypt2831 T
ypt2832 C
ypt2842 Y
ypt2843 Y
ypt2849 T
ypt2870 T
ypt2891_L3_I041 T
ypt2902 C
ypt2911 C
ypt2912 T
ypt2918 C
ypt2929 C
ypt2930 C
ypt3001 C
ypt3003 C
ypt3008 T
ypt3009 Y
ypt3010 C
ypt3012 T
ypt3016 C
ypt3028 Y
ypt3040 Y
ypt3045 T
ypt3047 T
ypt3050 T
ypt3052 C
ypt3138 T
ypt3140 T
ypt3141 C
ypt3142 T
ypt3143 T
ypt3145 T
ypt3146 C
ypt3150_L8_I023 C
ypt3159_L6_I035 C
ypt3160_L8_I024 T
ypt3179_L8_I025 T
ypt3180 Y
ypt3182_L1_I039 T
ypt3189_L1_I040 C
ypt3190_L8_I026 C
ypt3193_L1_I027 C
ypt3196_L2_I043 T
ypt3197_L1_I044 Y
ypt3205_L2_I047 T
ypt3211_L6_I052 T
ypt3220_L1_I031 T
ypt3221_L1_I032 T
ypt3239_L1_I035 C
ypt3245 T
ypt3257_L1_I056 C
ypt3258_L3_I001 Y
ypt3259_L6_I002 C
ypt3261_L7_I004 Y
ypt3262_L7_I005 T
ypt3269_L7_I006 T
ypt3271_L7_I008 T
ypt3274A_L7_I011 T
ypt55_L1_I033 T
ypt896_L2_I047 C
ypt899_L6_I051 T
ypt901_L1_I052 C
ypt903_L2_I054 C
ypt904_L4_I055 T
ypt907_L6_I002 T
ypt910_L3_I005 T
ypt911_L6_I006 T
ypt912 T
ypt917 Y
ypt918_L3_I007 T
ypt919_L4_I008 T
ypt920_L5_I010 T
ypt921_L8_I011 T
ypt923_L2_I051 T
ypt924_L3_I021 T
ypt926_L2_I023 C
ypt928 C
ypt930 C
ypt932 T
ypt933 T
ypt940_L4_I026 T
ypt941_L5_I027 T
ypt945_L4_I031 T
ypt953 C
ypt954 C
ypt955 T
ypt956x C
ypt960 C
ypt961 T
ypt963 C
ypt964 T
ypt965 T
ypt966 C
ypt971 C
ypt974 T
ypt975_L8_I039 T
ypt976_L7_I040 T
ypt977_L2_I041 Y
ypt980_L3_I043 C
ypt981_L2_I044 T
ypt982_L4_I045 T
yptwj T
147209 T
147830 T