ChickenSD

ChickenSD / Individual SNP / ggaS0013002455264

Detail information of ggaS0013002455264

1.General Information

SNP ID: ggaS0013002455264
Organism: Gallus gallus
Individual: 111S_L3_I047

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 111S_L3_I047
chr21 117624 A C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0013002455264 ENSGALG00000000468 RCC2 upstream_gene_variant => =>
ggaS0013002455264 ENSGALG00000000449 ARHGEF10L upstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S A
101S_L1_I028 A
102S_L3_I037 A
107S_L2_I031 A
112S_L3_I035 A
114S_L3_I037 A
116S_L6_I038 M
11S A
120S_L1_I041 A
124S_L2_I048 A
125S_L3_I050 A
128S_L1_I042 A
130S_L4_I044 A
132S_L2_I046 A
133S_L8_I046 A
135S_L3_I048 A
18833 M
19297 A
22S_L6_I029 A
24S_L4_I031 A
25S_L3_I032 A
26S A
28S_L4_I035 C
29S_L3_I036 A
30S_L2_I037 A
32S_L1_I039 A
39S_L6_I053 A
3S_L4_I003 A
43S A
44S_L4_I001 A
53S_L2_I006 A
54S_L2_I007 A
55S_L1_I008 A
56S_L1_I010 A
57S_L3_I046 A
5S A
64S_L4_I001 A
66S_L2_I003 C
68S_L3_I012 A
6S A
73S_L1_I025 A
75S_L3_I027 A
80S_L3_I004 A
82S C
87S_L5_I010 A
89S_L6_I012 A
95S_L8_I025 A
96S_L4_I026 A
97S_L8_I027 A
98S_L3_I034 A
99S_L2_I035 A
9S A
A12 M
BKL2 A
BLO11 A
GVF A
India1 A
India15 A
India21 M
India23 A
India25 A
India29 C
India33 A
India45 A
India47 A
India5 A
India51 A
India59 A
India61 A
India7 A
L2 A
N1 A
N11 A
N13 A
N18 A
N5 A
N7 A
N8 A
S-f2_I107 A
S-m1_I101 A
S-m3_I103 C
SAMN02486156 A
SAMN02486158 A
SAMN02486163 A
SAMN02486166 A
Silkia A
T2 A
T3 A
T5 A
TD1 A
TD12 A
TD15 A
TD6 A
TD9 A
Tibet A
Xcelris_120 A
Xcelris_13B A
Xcelris_141 A
Xcelris_176 A
Xcelris_219 A
Xcelris_224 A
Xcelris_227 C
Xcelris_275 A
Xcelris_276 A
Xcelris_336 A
Xcelris_377 A
Xcelris_392 A
Xcelris_4A A
Xcelris_6A A
Xcelris_98 A
Xcelris_MT-18 A
Xcelris_MT-6 A
Xcelris_MT-99 A
Y1-f3_L7_I101 A
YPt565 A
YPt609 A
YPt637 A
YPt641 A
YPt648 A
You1 A
You3_L7_I1000005 A
Ypt568 A
Ypt569 A
Ypt570 A
Ypt572 A
Ypt574 A
Ypt576 A
Ypt578 A
Ypt579 A
Ypt580 A
Ypt581 A
Ypt583 A
Ypt586 A
Ypt589 A
Ypt590 A
Ypt591 A
Ypt595 A
Ypt596 A
Ypt598 A
Ypt603 A
Ypt607 A
Ypt638 A
Ypt642 A
Ypt645 A
Ypt646 A
Ypt647 A
Yt516 A
Yt517 A
Yt518 A
Yt519 A
Yt520 M
Yt521 A
Yt522 A
Yt524 A
Yt527 A
Yt528 A
Yt529 A
Yt530 A
Yt536 A
Yt538 A
Yt539 A
Yt540 A
ZJ1 A
ZJ4 A
india49 A
ypt171_L2_I021 A
ypt2063_L6_I005 A
ypt2082 A
ypt2094 A
ypt2107 A
ypt2109 A
ypt2111 A
ypt2114 A
ypt2115 C
ypt2122 A
ypt2126_L3_I053 A
ypt2127_L1_I036 A
ypt2163 A
ypt2164 A
ypt2165 A
ypt2166 A
ypt2167 A
ypt2168 A
ypt2169 A
ypt2170 A
ypt2171 A
ypt2172 A
ypt2176 A
ypt2177 A
ypt2178 A
ypt2184 A
ypt2186 A
ypt2187 A
ypt2190 A
ypt2201 A
ypt2214 A
ypt2215 A
ypt2217 A
ypt2219 C
ypt221_L3_I042 A
ypt2220 A
ypt2221 A
ypt2439 A
ypt2445 A
ypt2447 A
ypt2448 M
ypt2468 A
ypt2496 A
ypt2500 A
ypt2503 A
ypt2512 A
ypt2523 A
ypt2541 A
ypt2543 A
ypt2545 A
ypt2569 M
ypt2571 A
ypt2598 A
ypt2601 A
ypt2606 A
ypt2608 A
ypt2622 C
ypt2623 A
ypt2625 A
ypt2628 A
ypt263_L3_I031 A
ypt2640 A
ypt2646 A
ypt264_L3_I032 A
ypt2670 A
ypt2671 A
ypt2672 A
ypt2673 A
ypt2678 A
ypt2724 A
ypt2745 A
ypt2760 C
ypt2765 A
ypt2775 A
ypt2783 A
ypt2785 A
ypt2791 A
ypt2799 C
ypt2813 A
ypt2815 A
ypt2822 A
ypt2823 A
ypt2824 A
ypt2825 A
ypt2826 A
ypt2827 A
ypt2832 M
ypt2859 A
ypt2863 A
ypt2891_L3_I041 A
ypt2892 A
ypt2895_L3_I026 A
ypt2910 M
ypt2911 A
ypt2912 A
ypt2929 C
ypt3001 A
ypt3007 A
ypt3008 A
ypt3009 A
ypt3010 A
ypt3016 A
ypt3017 A
ypt3028 A
ypt3040 A
ypt3041 A
ypt3042 A
ypt3043 A
ypt3044 A
ypt3046 A
ypt3047 A
ypt3050 A
ypt3052 A
ypt3072 A
ypt3134 C
ypt3138 A
ypt3140 A
ypt3145 A
ypt3150_L8_I023 A
ypt3160_L8_I024 A
ypt3162_L6_I036 A
ypt3179_L8_I025 A
ypt3180 A
ypt3181_L7_I038 A
ypt3182_L1_I039 A
ypt3189_L1_I040 A
ypt3195_L1_I042 A
ypt3196_L2_I043 A
ypt3197_L1_I044 A
ypt3221_L1_I032 A
ypt3238_L3_I046 A
ypt3240_L6_I054 A
ypt3259_L6_I002 A
ypt3262_L7_I005 A
ypt3271_L7_I008 A
ypt3274A_L7_I011 C
ypt3275_L1_I012 A
ypt3276_L7_I021 A
ypt896_L2_I047 A
ypt901_L1_I052 A
ypt910_L3_I005 A
ypt913 A
ypt920_L5_I010 A
ypt931 A
ypt933 A
ypt937 A
ypt940_L4_I026 A
ypt943 A
ypt949_L3_I035 A
ypt952 A
ypt954 A
ypt955 A
ypt956x A
ypt957 A
ypt958 A
ypt961 A
ypt962 A
ypt963 A
ypt965 A
ypt971 A
ypt973_L4_I037 A
ypt975_L8_I039 A
ypt976_L7_I040 A
ypt977_L2_I041 A
ypt978_L2_I052 A
ypt980_L3_I043 A
ypt984 A
147830 A
GLF_denovo A
Gallus_Sonneriatii_d A