ggaS0006002364816

Detail information of ggaS0006002364816

1.General Information

SNP ID:	ggaS0006002364816
Organism:	Gallus gallus
Individual:	105S_L3_I039

2.Allele information

Platform:	SOLEXA
Method:	sequence
SNP Class:	SNP
Genotype:	C

3.Reference Map information

Chrom	Position	Reference	105S_L3_I039
chr21	10293	T	C

4.Gene information

Var ID	Gene ID	Transcript ID	Gene Symbol	Variant Effect	Biotype	cDNA Position	Allele Change	Protein ID	Protein Position	Residue Change
ggaS0006002364816	ENSGALG00000000426		IGSF21	downstream_gene_variant			=>			=>
ggaS0006002364816	ENSGALG00000000420		KLHDC7A	upstream_gene_variant			=>			=>

5.Individual Genotype

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Individual	Genotype
100S	Y
101S_L1_I028	Y
102S_L3_I037	T
103S	T
104S_L7_I029	T
106S_L6_I030	Y
107S_L2_I031	Y
108S_L6_I032	Y
109S_L5_I033	C
10S_L1_I052	T
110S_L4_I034	Y
111S_L3_I047	T
112S_L3_I035	T
113S_L1_I036	C
114S_L3_I037	T
116S_L6_I038	C
117S_L2_I039	C
118S_L4_I040	C
119S_L3_I041	C
11S	Y
120S_L1_I041	Y
121S_L3_I042	T
122S_L4_I043	C
123S_L4_I044	C
124S_L2_I048	Y
125S_L3_I050	C
126S_L3_I051	C
127S_L2_I045	T
128S_L1_I042	T
129S_L3_I043	Y
12S_L4_I011	T
130S_L4_I044	T
131S_L2_I045	T
132S_L2_I046	T
133S_L8_I046	T
134S_L2_I047	C
135S_L3_I048	C
13S_L7_I012	C
14S_L2_I021	Y
15S_L6_I022	Y
16S_L5_I023	Y
17S_L3_I024	Y
18833	C
18S_L7_I025	C
19297	Y
19912	Y
19S_L4_I026	C
1S	Y
20736	C
20S_L7_I027	Y
21S_L6_I028	Y
22S_L6_I029	Y
23S_L2_I030	Y
24S_L4_I031	T
25S_L3_I032	C
26S	Y
27S_L4_I034	C
28S_L4_I035	C
29S_L3_I036	T
2S	C
30S_L2_I037	Y
31S_L3_I038	Y
32S_L1_I039	T
33S	Y
35S_L5_I041	C
36S_L5_I042	T
37S_L2_I043	Y
38S_L6_I044	Y
39S_L6_I053	T
3S_L4_I003	T
40S_L2_I054	Y
41S_L5_I045	T
42S_L3_I055	T
43S	Y
44S_L4_I001	Y
45S_L2_I002	Y
46S_L4_I003	C
47S_L3_I046	C
48S_L1_I004	Y
49S_L1_I005	Y
4S_L4_I004	Y
50S_L1_I047	C
51S_L6_I048	T
52S_L2_I050	Y
53S_L2_I006	Y
54S_L2_I007	C
55S_L1_I008	C
56S_L1_I010	Y
57S_L3_I046	C
58S_L4_I051	C
59S_L5_I052	Y
5S	T
60S_L5_I053	T
61S_L8_I054	C
62S_L8_I055	Y
63S_L5_I056	Y
64S_L4_I001	Y
65S_L5_I002	C
66S_L2_I003	T
67S_L1_I011	C
68S_L3_I012	Y
69S	Y
6S	Y
70S	C
71S_L3_I023	Y
72S_L1_I024	Y
73S_L1_I025	Y
74S_L4_I026	C
75S_L3_I027	Y
76S_L1_I028	Y
77S_L4_I029	T
78S_L4_I030	C
79S_L2_I031	Y
7S_L4_I007	C
80S_L3_I004	C
81S_L1_I005	C
82S	C
83S_L3_I033	Y
84S_L5_I006	Y
85S_L5_I007	Y
86S_L5_I008	T
87S_L5_I010	T
88S_L4_I011	Y
89S_L6_I012	Y
90S_L4_I021	T
91S_L4_I022	Y
92S_L5_I023	T
93S_L7_I024	Y
95S_L8_I025	Y
96S_L4_I026	Y
97S_L8_I027	T
98S_L3_I034	Y
99S_L2_I035	T
9S	T
A1	T
A10	Y
A12	Y
A14	C
A3	Y
A8	T
BKL2	C
BLB1_L2_I007	C
BLB2_L2_I008	C
BLO1	C
BLO11	C
BLO15	C
BLO2	C
BLO3_L4_I022	C
BOJA2	C
BYW3_L3_I033	C
BYW5_L2_I010	C
GVF	C
India1	T
India11	C
India13	C
India15	Y
India17	Y
India19	Y
India21	Y
India23	C
India25	C
India27	Y
India29	C
India31	Y
India33	C
India35	C
India37	C
India39	Y
India41	C
India43	C
India45	Y
India47	T
India5	Y
India51	T
India55	C
India57	C
India59	Y
India61	T
India7	C
India9	Y
L2	T
N1	Y
N11	T
N13	Y
N18	Y
N3	Y
N5	T
N7	T
N8	C
S-f1_L4_I106	Y
S-f2_I107	Y
S-f3_I108	T
S-f4_L4_I109	Y
S-m1_I101	T
S-m2_I102	Y
S-m3_I103	C
S-m4_L2_I104	Y
S-m5_I105	T
S6	Y
SAMN02486156	Y
SAMN02486157	Y
SAMN02486158	C
SAMN02486159	Y
SAMN02486160	C
SAMN02486161	C
SAMN02486162	T
SAMN02486163	T
SAMN02486164	C
SAMN02486165	Y
SAMN02486166	Y
SAMN02486167	C
Silkia	Y
T2	T
T3	T
T5	C
TD1	T
TD12	Y
TD15	T
TD22	Y
TD27	T
TD30	Y
TD6	Y
TD9	C
Tibet	Y
Xcelris_10	C
Xcelris_101	C
Xcelris_104	C
Xcelris_105	C
Xcelris_10A	C
Xcelris_10B	T
Xcelris_112	C
Xcelris_113	C
Xcelris_114	C
Xcelris_11B	C
Xcelris_12	Y
Xcelris_120	T
Xcelris_127	T
Xcelris_128	Y
Xcelris_129	T
Xcelris_12A	C
Xcelris_13	T
Xcelris_137	C
Xcelris_13B	Y
Xcelris_141	C
Xcelris_142	T
Xcelris_143	C
Xcelris_144	C
Xcelris_14A	T
Xcelris_14B	Y
Xcelris_174	C
Xcelris_175	C
Xcelris_1B	C
Xcelris_219	C
Xcelris_222	C
Xcelris_224	C
Xcelris_226	C
Xcelris_227	C
Xcelris_278	T
Xcelris_279	T
Xcelris_280	T
Xcelris_2A	Y
Xcelris_2B	T
Xcelris_331	T
Xcelris_332	Y
Xcelris_333	Y
Xcelris_335	C
Xcelris_336	Y
Xcelris_340	Y
Xcelris_341	T
Xcelris_377	T
Xcelris_378	C
Xcelris_380	C
Xcelris_381	C
Xcelris_382	T
Xcelris_383	Y
Xcelris_384	Y
Xcelris_385	C
Xcelris_394	T
Xcelris_44	T
Xcelris_4A	Y
Xcelris_4B	T
Xcelris_5B	T
Xcelris_67	C
Xcelris_6A	Y
Xcelris_7	C
Xcelris_77	C
Xcelris_8	C
Xcelris_84	Y
Xcelris_8A	T
Xcelris_8B	T
Xcelris_90	Y
Xcelris_97	T
Xcelris_98	Y
Xcelris_MT-48	C
Xcelris_MT-85	T
Xcelris_MT-9	C
Xcelris_MT-99	C
Y1-f1_L5_I119	C
Y1-f2_L6_I121	Y
Y1-f3_L7_I101	T
Y1-m1_L6_I120	Y
Y1-m2_L4_I122	Y
Y1-m3_L7_I123	C
Y1-m4_I124	C
Y1-m5_L7_I102	C
YPt565	T
YPt601	T
YPt604	C
YPt609	Y
YPt610	Y
YPt637	Y
YPt641	T
YPt648	Y
You1	Y
You3_L7_I1000005	Y
Ypt566	C
Ypt567	T
Ypt568	T
Ypt569	Y
Ypt570	T
Ypt571	Y
Ypt572	T
Ypt573	Y
Ypt574	T
Ypt575	C
Ypt576	C
Ypt577	C
Ypt578	Y
Ypt579	T
Ypt580	T
Ypt581	T
Ypt582	C
Ypt583	T
Ypt584	C
Ypt585	Y
Ypt587	T
Ypt588	T
Ypt589	T
Ypt590	T
Ypt591	T
Ypt592	T
Ypt593	T
Ypt594	T
Ypt595	T
Ypt596	T
Ypt597	T
Ypt598	T
Ypt599	T
Ypt600	T
Ypt602	C
Ypt603	T
Ypt606	Y
Ypt607	Y
Ypt608	C
Ypt622	Y
Ypt623	Y
Ypt624	C
Ypt626	C
Ypt638	Y
Ypt640	C
Ypt642	C
Ypt643	C
Ypt645	T
Ypt646	C
Yt516	Y
Yt517	Y
Yt518	Y
Yt519	T
Yt520	Y
Yt521	Y
Yt522	T
Yt523	C
Yt524	T
Yt525	C
Yt526	Y
Yt527	T
Yt528	T
Yt529	C
Yt530	Y
Yt531	T
Yt536	Y
Yt538	Y
Yt539	T
Yt540	C
ZJ1	Y
ZJ2	T
ZJ3	Y
ZJ4	T
india3	C
india49	Y
production	T
yp914ypt	C
ypt169_L3_I011	Y
ypt170_L2_I012	Y
ypt171_L2_I021	C
ypt173_L2_I022	C
ypt175_L2_I023	T
ypt2041_L6_I002	Y
ypt2043_L1_I037	C
ypt2051_L3_I003	C
ypt2053_L6_I004	Y
ypt2063_L6_I005	Y
ypt2069_L6_I006	T
ypt2071_L1_I038	C
ypt2082	T
ypt2086	Y
ypt2087	Y
ypt2091	T
ypt2092	Y
ypt2093	T
ypt2094	C
ypt2095	Y
ypt2098	C
ypt2100	Y
ypt2101	Y
ypt2102	C
ypt2103	Y
ypt2105	Y
ypt2106	C
ypt2107	T
ypt2108	Y
ypt2109	T
ypt2110	T
ypt2111	T
ypt2112	Y
ypt2114	T
ypt2115	T
ypt2116	Y
ypt2117	T
ypt2118	T
ypt2119	T
ypt2120	Y
ypt2121	T
ypt2122	T
ypt2124_L4_I052	C
ypt2126_L3_I053	T
ypt2127_L1_I036	T
ypt2128_L6_I054	T
ypt2144_L6_I055	T
ypt2145_L6_I056	T
ypt2146_L6_I001	Y
ypt2163	T
ypt2164	Y
ypt2165	T
ypt2166	Y
ypt2167	T
ypt2168	T
ypt2169	C
ypt2170	T
ypt2171	C
ypt2172	T
ypt2173	Y
ypt2174	C
ypt2175	Y
ypt2176	Y
ypt2177	Y
ypt2178	T
ypt217_L2_I024	Y
ypt2184	T
ypt2185	T
ypt2186	Y
ypt2187	T
ypt2189	Y
ypt2190	T
ypt2191	Y
ypt219_L3_I025	C
ypt2200	C
ypt2201	Y
ypt2205	Y
ypt2209	T
ypt220_L2_I026	T
ypt2214	T
ypt2215	C
ypt2216	Y
ypt2217	C
ypt2218	Y
ypt2219	T
ypt221_L3_I042	Y
ypt2220	Y
ypt2221	T
ypt2222	T
ypt222_L3_I027	T
ypt2437	C
ypt2438	Y
ypt2439	Y
ypt2440	Y
ypt2441	C
ypt2442	T
ypt2443	Y
ypt2444	T
ypt2445	T
ypt2446	C
ypt2447	T
ypt2448	C
ypt2449	C
ypt2454	C
ypt2459	C
ypt2468	Y
ypt2496	Y
ypt2497	T
ypt2498	C
ypt2499	C
ypt2500	Y
ypt2503	C
ypt2504	C
ypt2507	T
ypt2512	T
ypt2516	Y
ypt2521	T
ypt2523	T
ypt2534	T
ypt2541	T
ypt2543	T
ypt2544	C
ypt2545	C
ypt2546	C
ypt2547	Y
ypt2552	Y
ypt2562	Y
ypt2563	Y
ypt2569	C
ypt2570	C
ypt2571	Y
ypt2572	Y
ypt2573	C
ypt2574	Y
ypt2575	C
ypt2579	Y
ypt258_L3_I028	Y
ypt2598	Y
ypt259_L2_I029	Y
ypt2601	T
ypt2606	C
ypt2608	Y
ypt2615	C
ypt2622	C
ypt2623	T
ypt2624	C
ypt2625	Y
ypt2627	Y
ypt2628	T
ypt2629	Y
ypt262_L3_I030	C
ypt2630	T
ypt2636	Y
ypt2638	Y
ypt263_L3_I031	T
ypt2640	T
ypt2641	Y
ypt2643	T
ypt2644	T
ypt2646	Y
ypt264_L3_I032	Y
ypt2650	Y
ypt2653	C
ypt2656	C
ypt2657	Y
ypt2658	Y
ypt2661	Y
ypt2664	C
ypt2665	T
ypt2669	Y
ypt2670	Y
ypt2671	C
ypt2672	C
ypt2673	Y
ypt2678	C
ypt2706	C
ypt2722	Y
ypt2724	T
ypt2729	T
ypt2733	C
ypt2739	Y
ypt2740	Y
ypt2745	Y
ypt2746	C
ypt2760	T
ypt2761	C
ypt2765	Y
ypt2766	Y
ypt2775	Y
ypt2780	C
ypt2781	Y
ypt2782	Y
ypt2783	Y
ypt2784	C
ypt2785	Y
ypt2786	Y
ypt2787	T
ypt2788	C
ypt2789	Y
ypt2790	C
ypt2791	C
ypt2792	C
ypt2799	C
ypt2800	Y
ypt2808	Y
ypt2810	Y
ypt2812	T
ypt2813	T
ypt2814	Y
ypt2815	Y
ypt2816	T
ypt2817	Y
ypt2819	T
ypt2821	Y
ypt2822	Y
ypt2823	Y
ypt2824	T
ypt2825	Y
ypt2826	T
ypt2827	T
ypt2828	T
ypt2831	Y
ypt2832	Y
ypt2842	C
ypt2843	Y
ypt2849	T
ypt2859	C
ypt2860	C
ypt2861	C
ypt2862	C
ypt2863	C
ypt2870	C
ypt2871	C
ypt2887	C
ypt2888	C
ypt2889	C
ypt2890_L3_I040	C
ypt2891_L3_I041	C
ypt2892	T
ypt2893_L3_I025	C
ypt2894	C
ypt2895_L3_I026	Y
ypt2902	Y
ypt2909	Y
ypt2910	Y
ypt2911	C
ypt2912	C
ypt2918	Y
ypt2929	C
ypt2930	Y
ypt3001	C
ypt3002	C
ypt3003	C
ypt3004	Y
ypt3005	C
ypt3006	C
ypt3007	Y
ypt3008	T
ypt3009	Y
ypt3010	T
ypt3011	C
ypt3012	C
ypt3016	Y
ypt3017	T
ypt3028	C
ypt3038	Y
ypt3040	T
ypt3041	Y
ypt3042	T
ypt3043	Y
ypt3044	Y
ypt3045	Y
ypt3046	T
ypt3047	T
ypt3050	C
ypt3051	Y
ypt3052	Y
ypt3061	T
ypt3069	Y
ypt3072	T
ypt3133	Y
ypt3134	C
ypt3135	Y
ypt3136	T
ypt3137	Y
ypt3138	Y
ypt3139	Y
ypt3140	C
ypt3141	Y
ypt3142	C
ypt3143	C
ypt3144_L3_I039	T
ypt3145	T
ypt3146	C
ypt3149_L2_I034	Y
ypt3150_L8_I023	Y
ypt3159_L6_I035	C
ypt3160_L8_I024	Y
ypt3162_L6_I036	T
ypt3179_L8_I025	T
ypt3180	C
ypt3181_L7_I038	T
ypt3182_L1_I039	Y
ypt3189_L1_I040	T
ypt3190_L8_I026	Y
ypt3191_L2_I041	T
ypt3193_L1_I027	Y
ypt3195_L1_I042	Y
ypt3196_L2_I043	C
ypt3197_L1_I044	Y
ypt3198_L2_I045	C
ypt3204_L7_I046	C
ypt3205_L2_I047	C
ypt3206_L1_I048	C
ypt3207_L6_I050	C
ypt3210_L6_I051	T
ypt3211_L6_I052	C
ypt3212_L4_I028	C
ypt3213_L8_I029	C
ypt3219_L1_I030	C
ypt3220_L1_I031	Y
ypt3221_L1_I032	T
ypt3222_L1_I033	T
ypt3224_L8_I043	Y
ypt3225_L2_I053	T
ypt3226_L3_I044	C
ypt3228-7_L1_I034	T
ypt3229_L8_I045	C
ypt3238_L3_I046	Y
ypt3240_L6_I054	C
ypt3241_L6_I055	T
ypt3243_L8_I047	C
ypt3245	C
ypt3246_L6_I050	T
ypt3247_L6_I051	Y
ypt3257_L1_I056	C
ypt3258_L3_I001	C
ypt3261_L7_I004	C
ypt3262_L7_I005	C
ypt3270_L1_I007	C
ypt3271_L7_I008	C
ypt3272_L7_I010	C
ypt3274A_L7_I011	C
ypt3277_L6_I027	T
ypt3278_L3_I028	T
ypt3289_L8_I021	T
ypt47_L2_I029	Y
ypt50_L2_I030	T
ypt53_L2_I032	T
ypt55_L1_I033	Y
ypt890	Y
ypt891	C
ypt896_L2_I047	Y
ypt898	Y
ypt899_L6_I051	T
ypt901_L1_I052	T
ypt902_L1_I053	C
ypt904_L4_I055	C
ypt905_L6_I056	C
ypt906_L3_I001	T
ypt907_L6_I002	Y
ypt908_L1_I003	Y
ypt909_L5_I004	C
ypt911_L6_I006	T
ypt912	T
ypt913	Y
ypt915	T
ypt918_L3_I007	T
ypt919_L4_I008	C
ypt920_L5_I010	Y
ypt922_L4_I012	C
ypt923_L2_I051	C
ypt924_L3_I021	C
ypt925_L2_I022	Y
ypt926_L2_I023	T
ypt928	T
ypt929	Y
ypt930	T
ypt931	Y
ypt936	C
ypt938x	T
ypt939_L5_I025	C
ypt940_L4_I026	C
ypt941_L5_I027	C
ypt942_L7_I028	Y
ypt943	T
ypt944_L3_I030	Y
ypt945_L4_I031	Y
ypt946_L4_I032	C
ypt947_L5_I033	C
ypt948_L2_I034	C
ypt949_L3_I035	T
ypt950_L5_I036	T
ypt951	C
ypt952	Y
ypt953	Y
ypt954	Y
ypt955	T
ypt956x	Y
ypt957	Y
ypt958	Y
ypt959	C
ypt960	T
ypt961	T
ypt962	Y
ypt963	T
ypt964	Y
ypt965	T
ypt966	Y
ypt971	T
ypt972x	C
ypt973_L4_I037	C
ypt974	C
ypt975_L8_I039	Y
ypt976_L7_I040	T
ypt977_L2_I041	T
ypt978_L2_I052	T
ypt979_L6_I042	C
ypt980_L3_I043	T
ypt981_L2_I044	C
ypt982_L4_I045	Y
yptwj	T
147209	T
147830	T
GLF_denovo	T
Gallus_Sonneriatii_d	T
Ypt4000	T
Ypt4879	T
Ypt4880	T