ChickenSD

ChickenSD / Individual SNP / ggaS0006002364812

Detail information of ggaS0006002364812

1.General Information

SNP ID: ggaS0006002364812
Organism: Gallus gallus
Individual: 105S_L3_I039

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: G

3.Reference Map information

Chrom Position Reference 105S_L3_I039
chr21 9127 A G

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0006002364812 ENSGALG00000000426 IGSF21 downstream_gene_variant => =>
ggaS0006002364812 ENSGALG00000000420 KLHDC7A upstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S R
101S_L1_I028 G
102S_L3_I037 A
103S A
104S_L7_I029 A
106S_L6_I030 G
107S_L2_I031 R
108S_L6_I032 A
109S_L5_I033 G
10S_L1_I052 A
110S_L4_I034 R
111S_L3_I047 A
112S_L3_I035 A
113S_L1_I036 G
114S_L3_I037 A
116S_L6_I038 G
117S_L2_I039 G
118S_L4_I040 G
119S_L3_I041 G
11S R
120S_L1_I041 R
121S_L3_I042 A
122S_L4_I043 G
123S_L4_I044 G
124S_L2_I048 R
125S_L3_I050 G
126S_L3_I051 G
127S_L2_I045 A
128S_L1_I042 A
129S_L3_I043 R
12S_L4_I011 A
130S_L4_I044 R
131S_L2_I045 A
132S_L2_I046 A
133S_L8_I046 A
134S_L2_I047 R
135S_L3_I048 G
13S_L7_I012 G
14S_L2_I021 R
15S_L6_I022 R
16S_L5_I023 R
17S_L3_I024 G
18833 G
19297 R
19912 A
19S_L4_I026 G
1S R
20736 G
20S_L7_I027 R
21S_L6_I028 R
22S_L6_I029 R
23S_L2_I030 A
24S_L4_I031 A
25S_L3_I032 G
26S R
27S_L4_I034 G
28S_L4_I035 G
29S_L3_I036 A
2S G
30S_L2_I037 G
31S_L3_I038 R
32S_L1_I039 A
33S A
35S_L5_I041 G
36S_L5_I042 A
37S_L2_I043 R
38S_L6_I044 R
39S_L6_I053 A
3S_L4_I003 R
40S_L2_I054 R
41S_L5_I045 A
42S_L3_I055 R
43S R
44S_L4_I001 R
45S_L2_I002 R
46S_L4_I003 G
47S_L3_I046 G
48S_L1_I004 R
49S_L1_I005 R
4S_L4_I004 R
50S_L1_I047 G
51S_L6_I048 A
53S_L2_I006 R
54S_L2_I007 G
55S_L1_I008 G
56S_L1_I010 R
57S_L3_I046 G
58S_L4_I051 G
59S_L5_I052 G
5S A
60S_L5_I053 A
61S_L8_I054 G
62S_L8_I055 R
63S_L5_I056 R
64S_L4_I001 R
65S_L5_I002 G
66S_L2_I003 A
67S_L1_I011 G
68S_L3_I012 R
69S G
6S R
70S G
71S_L3_I023 R
72S_L1_I024 R
73S_L1_I025 R
74S_L4_I026 G
75S_L3_I027 R
76S_L1_I028 R
77S_L4_I029 A
78S_L4_I030 G
79S_L2_I031 R
7S_L4_I007 G
80S_L3_I004 G
81S_L1_I005 G
82S G
83S_L3_I033 R
84S_L5_I006 R
85S_L5_I007 G
86S_L5_I008 A
87S_L5_I010 A
88S_L4_I011 R
90S_L4_I021 A
91S_L4_I022 A
92S_L5_I023 A
93S_L7_I024 R
95S_L8_I025 R
96S_L4_I026 R
97S_L8_I027 A
98S_L3_I034 R
99S_L2_I035 A
9S A
A1 A
A10 R
A12 R
A14 R
A3 R
A8 A
BKL2 G
BLB1_L2_I007 G
BLB2_L2_I008 G
BLO1 G
BLO11 G
BOJA2 G
BYW3_L3_I033 G
BYW5_L2_I010 G
GVF G
India1 A
India11 G
India13 G
India15 R
India17 R
India19 A
India21 R
India23 G
India25 G
India27 R
India29 G
India31 A
India33 G
India35 G
India37 R
India39 A
India41 G
India43 G
India45 R
India47 A
India5 R
India51 A
India55 G
India57 G
India59 R
India61 A
India7 G
India9 R
L2 A
N1 R
N11 R
N13 R
N18 R
N3 A
N5 A
N7 A
N8 G
S-f1_L4_I106 G
S-f2_I107 R
S-f3_I108 A
S-f4_L4_I109 R
S-m1_I101 A
S-m2_I102 A
S-m3_I103 G
S-m4_L2_I104 R
S-m5_I105 A
S6 R
SAMN02486157 A
SAMN02486158 G
SAMN02486159 R
SAMN02486160 G
SAMN02486161 G
SAMN02486163 A
SAMN02486164 G
SAMN02486165 G
SAMN02486166 A
SAMN02486167 G
Silkia R
T2 A
T3 A
T5 G
TD1 A
TD12 R
TD15 A
TD22 R
TD27 A
TD30 R
TD6 R
TD9 G
Tibet R
Xcelris_10 G
Xcelris_101 G
Xcelris_104 G
Xcelris_10A G
Xcelris_10B A
Xcelris_113 G
Xcelris_114 G
Xcelris_11B G
Xcelris_12 R
Xcelris_120 A
Xcelris_127 A
Xcelris_128 R
Xcelris_129 G
Xcelris_13 R
Xcelris_137 A
Xcelris_13B G
Xcelris_141 G
Xcelris_142 G
Xcelris_143 G
Xcelris_144 G
Xcelris_14A A
Xcelris_14B G
Xcelris_174 A
Xcelris_175 R
Xcelris_1A R
Xcelris_219 G
Xcelris_221 A
Xcelris_222 G
Xcelris_224 G
Xcelris_226 G
Xcelris_227 G
Xcelris_275 A
Xcelris_279 A
Xcelris_280 A
Xcelris_282 G
Xcelris_2A R
Xcelris_2B A
Xcelris_331 R
Xcelris_333 R
Xcelris_335 G
Xcelris_336 A
Xcelris_339 A
Xcelris_341 A
Xcelris_36 A
Xcelris_377 A
Xcelris_378 R
Xcelris_379 G
Xcelris_380 R
Xcelris_381 G
Xcelris_382 A
Xcelris_383 G
Xcelris_384 G
Xcelris_385 G
Xcelris_392 G
Xcelris_394 A
Xcelris_44 G
Xcelris_5A R
Xcelris_5B A
Xcelris_67 G
Xcelris_6A A
Xcelris_7 G
Xcelris_77 G
Xcelris_8 G
Xcelris_84 R
Xcelris_8B A
Xcelris_90 R
Xcelris_97 R
Xcelris_98 R
Xcelris_MT-134 A
Xcelris_MT-18 R
Xcelris_MT-38 A
Xcelris_MT-48 G
Xcelris_MT-6 G
Xcelris_MT-85 A
Xcelris_MT-9 R
Xcelris_MT-99 G
Y1-f1_L5_I119 G
Y1-f2_L6_I121 R
Y1-f3_L7_I101 A
Y1-m1_L6_I120 R
Y1-m2_L4_I122 R
Y1-m3_L7_I123 G
Y1-m4_I124 G
Y1-m5_L7_I102 G
YPt565 A
YPt601 A
YPt604 G
YPt609 R
YPt610 A
YPt637 R
YPt641 A
YPt648 R
You1 R
You3_L7_I1000005 R
Ypt566 G
Ypt567 A
Ypt568 A
Ypt569 A
Ypt570 A
Ypt571 R
Ypt572 A
Ypt573 R
Ypt574 A
Ypt575 G
Ypt576 G
Ypt577 G
Ypt578 R
Ypt579 A
Ypt580 A
Ypt581 A
Ypt582 G
Ypt583 A
Ypt584 G
Ypt585 R
Ypt586 A
Ypt587 A
Ypt588 A
Ypt589 A
Ypt590 A
Ypt591 A
Ypt592 A
Ypt593 A
Ypt594 A
Ypt595 A
Ypt596 A
Ypt597 A
Ypt598 A
Ypt599 A
Ypt600 A
Ypt602 G
Ypt603 A
Ypt606 R
Ypt607 G
Ypt608 G
Ypt622 G
Ypt623 R
Ypt624 G
Ypt626 G
Ypt638 R
Ypt640 G
Ypt642 G
Ypt643 G
Ypt645 A
Ypt646 G
Ypt647 G
Yt516 R
Yt517 R
Yt518 R
Yt519 A
Yt520 R
Yt521 R
Yt522 A
Yt523 G
Yt524 A
Yt525 G
Yt526 R
Yt527 A
Yt528 A
Yt529 G
Yt530 R
Yt531 A
Yt536 R
Yt538 R
Yt539 A
Yt540 G
ZJ1 R
ZJ2 A
ZJ3 R
ZJ4 A
india3 G
india49 R
production A
yp914ypt G
ypt169_L3_I011 R
ypt170_L2_I012 R
ypt171_L2_I021 G
ypt173_L2_I022 G
ypt175_L2_I023 A
ypt2041_L6_I002 R
ypt2043_L1_I037 G
ypt2051_L3_I003 G
ypt2053_L6_I004 R
ypt2063_L6_I005 A
ypt2069_L6_I006 A
ypt2071_L1_I038 G
ypt2082 A
ypt2086 R
ypt2087 A
ypt2091 A
ypt2092 A
ypt2093 A
ypt2094 G
ypt2095 R
ypt2098 G
ypt2100 R
ypt2101 R
ypt2102 G
ypt2103 R
ypt2105 G
ypt2106 R
ypt2107 A
ypt2109 A
ypt2110 A
ypt2114 A
ypt2115 A
ypt2116 R
ypt2117 A
ypt2118 A
ypt2119 A
ypt2120 A
ypt2121 A
ypt2122 A
ypt2124_L4_I052 A
ypt2126_L3_I053 A
ypt2127_L1_I036 A
ypt2128_L6_I054 A
ypt2144_L6_I055 A
ypt2145_L6_I056 A
ypt2146_L6_I001 R
ypt2163 A
ypt2164 R
ypt2165 A
ypt2166 R
ypt2167 A
ypt2168 A
ypt2169 G
ypt2170 A
ypt2171 G
ypt2172 A
ypt2173 R
ypt2174 R
ypt2175 R
ypt2176 R
ypt2177 R
ypt2178 A
ypt217_L2_I024 R
ypt2184 A
ypt2185 A
ypt2186 A
ypt2187 A
ypt2189 R
ypt2190 A
ypt2191 R
ypt219_L3_I025 G
ypt2200 G
ypt2201 R
ypt2205 R
ypt2209 A
ypt220_L2_I026 A
ypt2214 A
ypt2215 G
ypt2216 R
ypt2217 G
ypt2218 R
ypt2219 A
ypt221_L3_I042 R
ypt2220 G
ypt2221 A
ypt2222 A
ypt222_L3_I027 A
ypt2437 G
ypt2438 G
ypt2439 R
ypt2440 A
ypt2441 G
ypt2442 A
ypt2443 R
ypt2444 A
ypt2445 A
ypt2446 G
ypt2447 A
ypt2448 G
ypt2449 G
ypt2454 G
ypt2459 G
ypt2468 R
ypt2496 R
ypt2497 A
ypt2498 G
ypt2499 G
ypt2500 R
ypt2503 G
ypt2504 G
ypt2507 A
ypt2512 A
ypt2516 R
ypt2521 A
ypt2523 R
ypt2534 A
ypt2541 A
ypt2543 A
ypt2544 R
ypt2545 G
ypt2546 G
ypt2547 R
ypt2552 R
ypt2562 R
ypt2563 G
ypt2569 G
ypt2571 R
ypt2572 A
ypt2573 G
ypt2574 R
ypt2575 G
ypt2579 R
ypt258_L3_I028 R
ypt2598 R
ypt259_L2_I029 A
ypt2601 A
ypt2606 G
ypt2608 R
ypt2615 G
ypt2622 G
ypt2623 A
ypt2624 G
ypt2625 G
ypt2627 R
ypt2628 A
ypt2629 A
ypt262_L3_I030 G
ypt2630 A
ypt2636 R
ypt2638 R
ypt263_L3_I031 A
ypt2640 R
ypt2641 R
ypt2643 A
ypt2644 R
ypt2646 R
ypt264_L3_I032 R
ypt2650 R
ypt2653 G
ypt2656 G
ypt2657 R
ypt2658 R
ypt2661 R
ypt2664 G
ypt2665 A
ypt2670 R
ypt2671 G
ypt2672 G
ypt2673 R
ypt2678 G
ypt2706 G
ypt2722 G
ypt2724 A
ypt2729 A
ypt2733 G
ypt2739 R
ypt2740 R
ypt2745 R
ypt2746 G
ypt2760 A
ypt2761 G
ypt2765 R
ypt2766 G
ypt2775 R
ypt2780 G
ypt2781 R
ypt2782 R
ypt2783 R
ypt2784 G
ypt2785 R
ypt2786 R
ypt2787 A
ypt2788 G
ypt2789 R
ypt2790 G
ypt2791 G
ypt2792 G
ypt2799 G
ypt2800 R
ypt2808 R
ypt2810 G
ypt2812 A
ypt2813 A
ypt2814 R
ypt2816 A
ypt2817 A
ypt2819 A
ypt2821 R
ypt2822 R
ypt2823 R
ypt2824 A
ypt2825 R
ypt2826 A
ypt2827 A
ypt2828 A
ypt2831 R
ypt2832 R
ypt2842 R
ypt2843 R
ypt2849 A
ypt2859 G
ypt2860 G
ypt2861 G
ypt2862 G
ypt2863 G
ypt2888 G
ypt2889 G
ypt2890_L3_I040 G
ypt2891_L3_I041 G
ypt2892 A
ypt2893_L3_I025 G
ypt2894 G
ypt2895_L3_I026 R
ypt2902 R
ypt2909 A
ypt2910 R
ypt2911 G
ypt2912 G
ypt2918 R
ypt2929 G
ypt2930 A
ypt3001 G
ypt3002 G
ypt3003 R
ypt3004 A
ypt3005 G
ypt3006 G
ypt3007 R
ypt3008 A
ypt3009 R
ypt3010 A
ypt3011 G
ypt3012 G
ypt3016 R
ypt3017 A
ypt3028 G
ypt3038 R
ypt3040 A
ypt3041 R
ypt3042 R
ypt3043 R
ypt3044 R
ypt3045 A
ypt3046 A
ypt3047 A
ypt3050 G
ypt3051 G
ypt3052 R
ypt3061 A
ypt3069 R
ypt3072 A
ypt3133 A
ypt3134 G
ypt3135 R
ypt3136 A
ypt3137 R
ypt3139 A
ypt3140 G
ypt3141 R
ypt3142 G
ypt3143 G
ypt3145 A
ypt3146 G
ypt3149_L2_I034 G
ypt3150_L8_I023 A
ypt3159_L6_I035 G
ypt3160_L8_I024 R
ypt3162_L6_I036 A
ypt3179_L8_I025 A
ypt3180 G
ypt3181_L7_I038 A
ypt3182_L1_I039 R
ypt3189_L1_I040 A
ypt3190_L8_I026 R
ypt3191_L2_I041 A
ypt3193_L1_I027 R
ypt3195_L1_I042 R
ypt3196_L2_I043 G
ypt3197_L1_I044 R
ypt3198_L2_I045 G
ypt3204_L7_I046 G
ypt3205_L2_I047 G
ypt3207_L6_I050 G
ypt3210_L6_I051 A
ypt3212_L4_I028 G
ypt3213_L8_I029 G
ypt3219_L1_I030 G
ypt3220_L1_I031 R
ypt3221_L1_I032 A
ypt3222_L1_I033 A
ypt3224_L8_I043 R
ypt3225_L2_I053 G
ypt3228-7_L1_I034 R
ypt3229_L8_I045 A
ypt3238_L3_I046 G
ypt3240_L6_I054 G
ypt3241_L6_I055 G
ypt3243_L8_I047 G
ypt3245 G
ypt3246_L6_I050 A
ypt3247_L6_I051 G
ypt3257_L1_I056 A
ypt3258_L3_I001 R
ypt3260_L6_I003 R
ypt3262_L7_I005 G
ypt3269_L7_I006 A
ypt3270_L1_I007 G
ypt3271_L7_I008 G
ypt3272_L7_I010 G
ypt3274A_L7_I011 G
ypt3275_L1_I012 A
ypt3278_L3_I028 A
ypt3289_L8_I021 A
ypt4001 G
ypt47_L2_I029 R
ypt50_L2_I030 A
ypt53_L2_I032 R
ypt890 R
ypt891 G
ypt896_L2_I047 A
ypt897_L3_I048 A
ypt899_L6_I051 A
ypt900_L2_I050 A
ypt901_L1_I052 A
ypt902_L1_I053 R
ypt903_L2_I054 G
ypt904_L4_I055 R
ypt905_L6_I056 G
ypt906_L3_I001 A
ypt907_L6_I002 G
ypt908_L1_I003 G
ypt909_L5_I004 G
ypt910_L3_I005 G
ypt911_L6_I006 A
ypt912 G
ypt917 R
ypt918_L3_I007 A
ypt919_L4_I008 G
ypt920_L5_I010 A
ypt922_L4_I012 G
ypt923_L2_I051 G
ypt924_L3_I021 G
ypt925_L2_I022 R
ypt928 A
ypt929 R
ypt930 R
ypt931 R
ypt932 A
ypt933 R
ypt934x A
ypt936 G
ypt937 G
ypt938x A
ypt939_L5_I025 R
ypt940_L4_I026 G
ypt941_L5_I027 G
ypt942_L7_I028 R
ypt943 A
ypt944_L3_I030 R
ypt945_L4_I031 R
ypt946_L4_I032 G
ypt947_L5_I033 G
ypt948_L2_I034 G
ypt949_L3_I035 A
ypt950_L5_I036 A
ypt951 G
ypt952 R
ypt953 A
ypt954 R
ypt955 A
ypt956x R
ypt957 R
ypt958 R
ypt959 G
ypt960 A
ypt961 A
ypt962 A
ypt963 A
ypt964 R
ypt965 A
ypt966 R
ypt971 A
ypt972x G
ypt973_L4_I037 G
ypt974 G
ypt975_L8_I039 R
ypt976_L7_I040 A
ypt977_L2_I041 A
ypt978_L2_I052 A
ypt979_L6_I042 G
ypt980_L3_I043 A
ypt981_L2_I044 G
ypt982_L4_I045 R
ypt984 A
yptwj A
147209 A
147830 A
GLF_denovo A
Gallus_Sonneriatii_d A
Ypt4000 A
Ypt4879 A
Ypt4880 A