ChickenSD

ChickenSD / Individual SNP / ggaS0006002364807

Detail information of ggaS0006002364807

1.General Information

SNP ID: ggaS0006002364807
Organism: Gallus gallus
Individual: 105S_L3_I039

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 105S_L3_I039
chr21 3057 T C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0006002364807 ENSGALG00000000420 KLHDC7A downstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S T
101S_L1_I028 T
102S_L3_I037 T
103S T
104S_L7_I029 T
106S_L6_I030 T
107S_L2_I031 Y
108S_L6_I032 T
109S_L5_I033 T
10S_L1_I052 T
110S_L4_I034 T
111S_L3_I047 T
112S_L3_I035 T
113S_L1_I036 Y
114S_L3_I037 T
116S_L6_I038 C
117S_L2_I039 T
118S_L4_I040 C
119S_L3_I041 C
11S T
120S_L1_I041 Y
121S_L3_I042 T
122S_L4_I043 T
123S_L4_I044 Y
124S_L2_I048 Y
125S_L3_I050 Y
126S_L3_I051 Y
127S_L2_I045 T
128S_L1_I042 T
129S_L3_I043 Y
12S_L4_I011 T
130S_L4_I044 T
131S_L2_I045 T
132S_L2_I046 T
133S_L8_I046 T
134S_L2_I047 C
135S_L3_I048 C
13S_L7_I012 Y
14S_L2_I021 T
15S_L6_I022 T
16S_L5_I023 T
17S_L3_I024 T
18833 C
18S_L7_I025 Y
19297 T
19912 Y
19S_L4_I026 T
1S T
20736 Y
20S_L7_I027 T
21S_L6_I028 T
22S_L6_I029 T
23S_L2_I030 T
24S_L4_I031 T
25S_L3_I032 T
26S C
27S_L4_I034 Y
28S_L4_I035 C
29S_L3_I036 T
2S T
30S_L2_I037 Y
31S_L3_I038 Y
32S_L1_I039 T
33S T
35S_L5_I041 T
36S_L5_I042 T
37S_L2_I043 Y
38S_L6_I044 T
39S_L6_I053 T
3S_L4_I003 T
40S_L2_I054 T
41S_L5_I045 T
42S_L3_I055 T
43S Y
44S_L4_I001 Y
45S_L2_I002 Y
46S_L4_I003 T
47S_L3_I046 Y
48S_L1_I004 T
49S_L1_I005 T
4S_L4_I004 T
50S_L1_I047 T
51S_L6_I048 T
52S_L2_I050 Y
53S_L2_I006 Y
54S_L2_I007 C
55S_L1_I008 Y
56S_L1_I010 T
57S_L3_I046 T
58S_L4_I051 T
59S_L5_I052 T
5S T
60S_L5_I053 T
61S_L8_I054 C
62S_L8_I055 T
63S_L5_I056 Y
64S_L4_I001 Y
65S_L5_I002 Y
66S_L2_I003 T
67S_L1_I011 T
68S_L3_I012 T
69S T
6S T
70S Y
71S_L3_I023 Y
72S_L1_I024 T
73S_L1_I025 Y
74S_L4_I026 T
75S_L3_I027 T
76S_L1_I028 T
77S_L4_I029 T
78S_L4_I030 T
79S_L2_I031 Y
7S_L4_I007 T
80S_L3_I004 Y
81S_L1_I005 Y
82S C
83S_L3_I033 T
84S_L5_I006 T
85S_L5_I007 T
86S_L5_I008 T
87S_L5_I010 T
88S_L4_I011 T
89S_L6_I012 T
90S_L4_I021 T
91S_L4_I022 T
92S_L5_I023 T
93S_L7_I024 T
95S_L8_I025 T
96S_L4_I026 T
97S_L8_I027 T
98S_L3_I034 Y
99S_L2_I035 T
9S T
A1 T
A10 T
A12 T
A14 T
A3 Y
A8 T
BKL2 T
BLB1_L2_I007 T
BLB2_L2_I008 T
BLO1 T
BLO11 T
BLO15 T
BLO2 T
BLO3_L4_I022 T
BOJA2 T
BYW3_L3_I033 T
BYW5_L2_I010 T
GVF T
India1 T
India11 Y
India13 Y
India15 Y
India17 T
India19 T
India21 T
India23 C
India25 Y
India27 T
India29 C
India31 Y
India33 T
India35 Y
India37 T
India39 Y
India41 Y
India43 Y
India45 T
India47 T
India5 Y
India51 T
India55 C
India57 Y
India59 Y
India61 T
India7 Y
India9 Y
L2 T
N1 T
N11 T
N13 T
N18 T
N3 T
N7 T
N8 T
S-f1_L4_I106 T
S-f2_I107 Y
S-f3_I108 T
S-f4_L4_I109 T
S-m1_I101 T
S-m2_I102 T
S-m3_I103 T
S-m4_L2_I104 T
S-m5_I105 T
S6 Y
SAMN02486156 T
SAMN02486157 T
SAMN02486158 T
SAMN02486159 T
SAMN02486160 C
SAMN02486161 T
SAMN02486163 T
SAMN02486164 Y
SAMN02486165 T
SAMN02486166 T
SAMN02486167 T
Silkia T
T2 T
T3 T
T5 Y
TD1 T
TD12 T
TD15 T
TD22 T
TD27 T
TD30 T
TD6 T
TD9 T
Tibet T
Xcelris_10 Y
Xcelris_101 T
Xcelris_104 T
Xcelris_105 T
Xcelris_10A T
Xcelris_10B T
Xcelris_112 T
Xcelris_113 T
Xcelris_114 T
Xcelris_12 T
Xcelris_120 T
Xcelris_127 T
Xcelris_128 Y
Xcelris_129 T
Xcelris_12A Y
Xcelris_13 T
Xcelris_137 T
Xcelris_13B T
Xcelris_14 T
Xcelris_142 T
Xcelris_143 T
Xcelris_144 C
Xcelris_14A T
Xcelris_174 Y
Xcelris_175 Y
Xcelris_1A T
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 C
Xcelris_227 C
Xcelris_275 T
Xcelris_276 C
Xcelris_278 T
Xcelris_279 T
Xcelris_282 T
Xcelris_2A T
Xcelris_2B T
Xcelris_331 T
Xcelris_332 T
Xcelris_333 T
Xcelris_335 Y
Xcelris_336 C
Xcelris_339 T
Xcelris_340 Y
Xcelris_341 T
Xcelris_377 T
Xcelris_378 T
Xcelris_380 C
Xcelris_381 T
Xcelris_382 T
Xcelris_383 Y
Xcelris_384 Y
Xcelris_385 T
Xcelris_44 Y
Xcelris_4A C
Xcelris_4B Y
Xcelris_5A C
Xcelris_5B T
Xcelris_67 T
Xcelris_6A T
Xcelris_7 C
Xcelris_77 T
Xcelris_8 T
Xcelris_84 T
Xcelris_8B T
Xcelris_90 T
Xcelris_97 T
Xcelris_98 Y
Xcelris_MT-134 T
Xcelris_MT-18 T
Xcelris_MT-38 T
Xcelris_MT-46 C
Xcelris_MT-48 C
Xcelris_MT-6 C
Xcelris_MT-85 T
Xcelris_MT-9 C
Xcelris_MT-99 C
Y1-f1_L5_I119 Y
Y1-f2_L6_I121 T
Y1-f3_L7_I101 T
Y1-m1_L6_I120 T
Y1-m2_L4_I122 T
Y1-m3_L7_I123 T
Y1-m4_I124 T
Y1-m5_L7_I102 T
YPt565 T
YPt601 T
YPt604 Y
YPt609 T
YPt610 T
YPt637 T
YPt641 T
YPt648 T
You1 T
You3_L7_I1000005 Y
Ypt566 T
Ypt567 T
Ypt568 T
Ypt569 T
Ypt570 T
Ypt572 T
Ypt573 T
Ypt574 T
Ypt575 Y
Ypt576 T
Ypt577 Y
Ypt578 T
Ypt579 T
Ypt580 T
Ypt581 T
Ypt582 T
Ypt583 T
Ypt585 T
Ypt586 T
Ypt587 T
Ypt588 T
Ypt589 T
Ypt590 Y
Ypt591 T
Ypt592 T
Ypt593 T
Ypt594 T
Ypt595 T
Ypt596 T
Ypt597 T
Ypt598 T
Ypt599 T
Ypt600 T
Ypt602 T
Ypt603 T
Ypt606 T
Ypt607 T
Ypt608 T
Ypt622 T
Ypt623 T
Ypt624 Y
Ypt626 C
Ypt638 T
Ypt640 Y
Ypt643 C
Ypt645 T
Ypt646 Y
Ypt647 T
Yt516 Y
Yt517 Y
Yt518 Y
Yt519 T
Yt520 Y
Yt521 T
Yt522 T
Yt523 Y
Yt524 T
Yt525 T
Yt526 Y
Yt527 T
Yt528 T
Yt529 T
Yt530 Y
Yt531 T
Yt536 T
Yt538 T
Yt539 T
Yt540 Y
ZJ1 Y
ZJ2 T
ZJ3 Y
ZJ4 T
india3 Y
india49 Y
production T
yp914ypt C
ypt169_L3_I011 T
ypt170_L2_I012 T
ypt171_L2_I021 Y
ypt173_L2_I022 Y
ypt175_L2_I023 T
ypt2041_L6_I002 C
ypt2043_L1_I037 T
ypt2051_L3_I003 T
ypt2053_L6_I004 T
ypt2063_L6_I005 Y
ypt2069_L6_I006 T
ypt2071_L1_I038 T
ypt2082 T
ypt2086 T
ypt2087 T
ypt2091 T
ypt2092 T
ypt2093 T
ypt2094 T
ypt2095 T
ypt2098 T
ypt2100 T
ypt2101 T
ypt2102 T
ypt2103 T
ypt2105 T
ypt2106 T
ypt2107 T
ypt2108 T
ypt2109 T
ypt2110 T
ypt2111 T
ypt2112 T
ypt2114 T
ypt2115 T
ypt2116 T
ypt2117 T
ypt2118 T
ypt2119 T
ypt2120 Y
ypt2121 T
ypt2122 T
ypt2126_L3_I053 T
ypt2127_L1_I036 T
ypt2128_L6_I054 T
ypt2144_L6_I055 T
ypt2145_L6_I056 T
ypt2146_L6_I001 T
ypt2163 T
ypt2164 Y
ypt2165 T
ypt2166 Y
ypt2167 T
ypt2168 T
ypt2169 T
ypt2170 T
ypt2171 T
ypt2172 T
ypt2173 Y
ypt2174 Y
ypt2175 T
ypt2176 T
ypt2177 T
ypt2178 T
ypt217_L2_I024 C
ypt2184 T
ypt2185 T
ypt2186 Y
ypt2187 T
ypt2189 T
ypt2190 T
ypt2191 Y
ypt219_L3_I025 Y
ypt2200 Y
ypt2201 T
ypt2205 T
ypt2209 T
ypt220_L2_I026 T
ypt2214 T
ypt2215 T
ypt2216 T
ypt2217 T
ypt2218 T
ypt2219 T
ypt221_L3_I042 T
ypt2220 T
ypt2221 T
ypt2222 T
ypt222_L3_I027 T
ypt2437 C
ypt2438 T
ypt2439 Y
ypt2440 T
ypt2441 T
ypt2442 T
ypt2443 T
ypt2444 T
ypt2445 T
ypt2446 Y
ypt2447 T
ypt2448 C
ypt2449 T
ypt2454 C
ypt2459 C
ypt2468 T
ypt2496 Y
ypt2497 T
ypt2498 T
ypt2499 Y
ypt2500 Y
ypt2503 Y
ypt2504 Y
ypt2507 T
ypt2512 T
ypt2516 Y
ypt2521 T
ypt2523 T
ypt2534 T
ypt2541 T
ypt2543 T
ypt2544 C
ypt2545 C
ypt2546 Y
ypt2547 T
ypt2552 T
ypt2562 T
ypt2563 T
ypt2569 C
ypt2570 Y
ypt2571 T
ypt2572 Y
ypt2573 T
ypt2574 T
ypt2575 Y
ypt2579 T
ypt258_L3_I028 T
ypt2598 T
ypt259_L2_I029 T
ypt2601 T
ypt2606 T
ypt2608 C
ypt2615 Y
ypt2622 C
ypt2623 T
ypt2624 T
ypt2625 Y
ypt2627 Y
ypt2628 T
ypt2629 T
ypt262_L3_I030 T
ypt2630 T
ypt2636 Y
ypt2638 T
ypt263_L3_I031 T
ypt2640 T
ypt2641 T
ypt2643 T
ypt2644 T
ypt2646 Y
ypt264_L3_I032 Y
ypt2650 Y
ypt2653 T
ypt2656 Y
ypt2657 T
ypt2658 T
ypt2661 T
ypt2664 T
ypt2665 T
ypt2669 Y
ypt2670 Y
ypt2671 C
ypt2672 Y
ypt2673 T
ypt2678 T
ypt2706 T
ypt2722 T
ypt2724 T
ypt2729 T
ypt2733 C
ypt2739 T
ypt2740 Y
ypt2745 Y
ypt2746 Y
ypt2760 T
ypt2761 T
ypt2765 T
ypt2766 T
ypt2775 T
ypt2780 Y
ypt2781 Y
ypt2782 T
ypt2783 Y
ypt2784 T
ypt2785 T
ypt2786 T
ypt2787 T
ypt2788 T
ypt2789 Y
ypt2790 T
ypt2791 Y
ypt2792 Y
ypt2799 C
ypt2800 T
ypt2808 T
ypt2810 T
ypt2812 T
ypt2813 T
ypt2814 T
ypt2815 T
ypt2816 T
ypt2817 T
ypt2819 T
ypt2821 T
ypt2822 T
ypt2823 T
ypt2824 T
ypt2825 Y
ypt2826 T
ypt2827 T
ypt2828 T
ypt2831 T
ypt2832 T
ypt2842 T
ypt2843 Y
ypt2849 T
ypt2859 T
ypt2860 T
ypt2861 T
ypt2862 T
ypt2863 T
ypt2870 T
ypt2871 T
ypt2887 T
ypt2888 T
ypt2889 T
ypt2890_L3_I040 T
ypt2891_L3_I041 T
ypt2892 T
ypt2893_L3_I025 Y
ypt2894 Y
ypt2895_L3_I026 Y
ypt2902 T
ypt2909 T
ypt2910 T
ypt2911 C
ypt2912 Y
ypt2918 T
ypt2929 C
ypt2930 Y
ypt3001 T
ypt3002 Y
ypt3003 T
ypt3004 Y
ypt3005 Y
ypt3006 Y
ypt3007 T
ypt3008 T
ypt3009 Y
ypt3010 T
ypt3011 C
ypt3012 Y
ypt3016 Y
ypt3017 T
ypt3028 Y
ypt3038 Y
ypt3040 T
ypt3041 T
ypt3042 T
ypt3043 T
ypt3044 T
ypt3045 T
ypt3047 T
ypt3050 T
ypt3051 T
ypt3052 Y
ypt3061 T
ypt3069 T
ypt3072 T
ypt3133 T
ypt3134 T
ypt3135 T
ypt3136 T
ypt3137 Y
ypt3138 T
ypt3139 T
ypt3140 T
ypt3141 T
ypt3142 C
ypt3143 T
ypt3145 T
ypt3146 Y
ypt3149_L2_I034 T
ypt3150_L8_I023 T
ypt3159_L6_I035 T
ypt3160_L8_I024 T
ypt3162_L6_I036 T
ypt3179_L8_I025 T
ypt3180 Y
ypt3181_L7_I038 T
ypt3182_L1_I039 T
ypt3189_L1_I040 T
ypt3190_L8_I026 T
ypt3191_L2_I041 T
ypt3193_L1_I027 T
ypt3195_L1_I042 T
ypt3196_L2_I043 T
ypt3197_L1_I044 T
ypt3198_L2_I045 Y
ypt3204_L7_I046 T
ypt3205_L2_I047 T
ypt3206_L1_I048 T
ypt3207_L6_I050 T
ypt3210_L6_I051 T
ypt3211_L6_I052 T
ypt3212_L4_I028 T
ypt3213_L8_I029 T
ypt3220_L1_I031 T
ypt3221_L1_I032 T
ypt3222_L1_I033 T
ypt3224_L8_I043 Y
ypt3225_L2_I053 T
ypt3226_L3_I044 Y
ypt3228-7_L1_I034 T
ypt3229_L8_I045 T
ypt3238_L3_I046 T
ypt3239_L1_I035 T
ypt3241_L6_I055 T
ypt3243_L8_I047 T
ypt3245 C
ypt3246_L6_I050 T
ypt3257_L1_I056 Y
ypt3258_L3_I001 Y
ypt3260_L6_I003 T
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 C
ypt3274A_L7_I011 C
ypt3275_L1_I012 T
ypt3276_L7_I021 C
ypt3277_L6_I027 T
ypt3278_L3_I028 T
ypt4001 T
ypt47_L2_I029 T
ypt50_L2_I030 T
ypt53_L2_I032 T
ypt55_L1_I033 T
ypt890 T
ypt891 Y
ypt896_L2_I047 C
ypt897_L3_I048 T
ypt898 Y
ypt899_L6_I051 T
ypt901_L1_I052 T
ypt902_L1_I053 T
ypt904_L4_I055 C
ypt905_L6_I056 T
ypt906_L3_I001 T
ypt907_L6_I002 Y
ypt908_L1_I003 Y
ypt909_L5_I004 T
ypt912 Y
ypt913 C
ypt915 Y
ypt917 C
ypt918_L3_I007 T
ypt919_L4_I008 T
ypt920_L5_I010 T
ypt922_L4_I012 C
ypt923_L2_I051 T
ypt924_L3_I021 T
ypt925_L2_I022 T
ypt928 T
ypt929 T
ypt930 T
ypt931 Y
ypt932 T
ypt933 T
ypt934x T
ypt935 C
ypt936 C
ypt937 C
ypt938x T
ypt939_L5_I025 C
ypt940_L4_I026 C
ypt941_L5_I027 Y
ypt942_L7_I028 T
ypt943 T
ypt944_L3_I030 T
ypt945_L4_I031 T
ypt946_L4_I032 T
ypt947_L5_I033 T
ypt948_L2_I034 T
ypt949_L3_I035 T
ypt950_L5_I036 T
ypt951 Y
ypt952 T
ypt953 T
ypt954 T
ypt955 T
ypt956x T
ypt957 T
ypt958 Y
ypt959 T
ypt960 T
ypt961 T
ypt962 T
ypt963 T
ypt965 T
ypt966 T
ypt971 T
ypt972x Y
ypt973_L4_I037 T
ypt974 Y
ypt975_L8_I039 T
ypt976_L7_I040 T
ypt977_L2_I041 T
ypt978_L2_I052 T
ypt979_L6_I042 T
ypt980_L3_I043 T
ypt982_L4_I045 T
ypt984 T
yptwj T
147209 T
147830 T
GLF_denovo Y
Gallus_Sonneriatii_d T
Ypt4000 T
Ypt4879 T
Ypt4880 T