ChickenSD

ChickenSD / Individual SNP / ggaS0005003646070

Detail information of ggaS0005003646070

1.General Information

SNP ID: ggaS0005003646070
Organism: Gallus gallus
Individual: 104S_L7_I029

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: C

3.Reference Map information

Chrom Position Reference 104S_L7_I029
chr5 197 A C

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0005003646070 ENSGALG00000024035 - upstream_gene_variant => =>

5.Individual Genotype

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Individual Genotype
100S C
101S_L1_I028 C
102S_L3_I037 C
103S M
105S_L3_I039 C
106S_L6_I030 C
107S_L2_I031 A
108S_L6_I032 C
109S_L5_I033 M
10S_L1_I052 C
110S_L4_I034 M
111S_L3_I047 A
112S_L3_I035 C
113S_L1_I036 C
114S_L3_I037 A
116S_L6_I038 A
117S_L2_I039 A
118S_L4_I040 M
119S_L3_I041 A
11S A
120S_L1_I041 M
121S_L3_I042 M
122S_L4_I043 C
123S_L4_I044 M
124S_L2_I048 C
125S_L3_I050 C
126S_L3_I051 A
127S_L2_I045 C
128S_L1_I042 M
129S_L3_I043 A
12S_L4_I011 C
130S_L4_I044 M
131S_L2_I045 C
132S_L2_I046 M
133S_L8_I046 C
134S_L2_I047 M
135S_L3_I048 C
13S_L7_I012 A
14S_L2_I021 M
15S_L6_I022 M
16S_L5_I023 M
17S_L3_I024 M
18833 A
18S_L7_I025 C
19297 C
19912 C
19S_L4_I026 A
1S M
20736 A
20S_L7_I027 M
21S_L6_I028 C
22S_L6_I029 A
23S_L2_I030 A
24S_L4_I031 M
25S_L3_I032 A
26S M
27S_L4_I034 M
28S_L4_I035 M
29S_L3_I036 M
2S A
30S_L2_I037 C
31S_L3_I038 C
32S_L1_I039 C
33S C
35S_L5_I041 C
36S_L5_I042 C
37S_L2_I043 M
38S_L6_I044 M
39S_L6_I053 A
3S_L4_I003 A
40S_L2_I054 M
41S_L5_I045 A
42S_L3_I055 M
43S M
44S_L4_I001 C
45S_L2_I002 M
46S_L4_I003 M
47S_L3_I046 C
48S_L1_I004 C
49S_L1_I005 A
4S_L4_I004 A
50S_L1_I047 A
51S_L6_I048 C
52S_L2_I050 C
53S_L2_I006 C
54S_L2_I007 M
55S_L1_I008 M
56S_L1_I010 C
57S_L3_I046 M
58S_L4_I051 C
59S_L5_I052 M
5S M
60S_L5_I053 M
61S_L8_I054 C
62S_L8_I055 M
63S_L5_I056 A
64S_L4_I001 A
65S_L5_I002 M
66S_L2_I003 A
67S_L1_I011 C
68S_L3_I012 A
69S M
6S M
70S C
71S_L3_I023 M
72S_L1_I024 M
73S_L1_I025 M
74S_L4_I026 A
75S_L3_I027 C
76S_L1_I028 M
77S_L4_I029 M
78S_L4_I030 C
79S_L2_I031 A
7S_L4_I007 A
80S_L3_I004 M
81S_L1_I005 M
82S A
83S_L3_I033 C
84S_L5_I006 M
86S_L5_I008 M
87S_L5_I010 C
88S_L4_I011 C
89S_L6_I012 C
90S_L4_I021 C
91S_L4_I022 C
92S_L5_I023 M
93S_L7_I024 C
95S_L8_I025 C
96S_L4_I026 C
97S_L8_I027 C
98S_L3_I034 C
99S_L2_I035 C
9S C
A1 M
A10 C
A12 M
A14 C
A3 M
A8 M
BKL2 C
BLB1_L2_I007 A
BLB2_L2_I008 A
BLO1 A
BLO11 A
BLO15 A
BLO2 A
BLO3_L4_I022 A
BOJA2 A
BYW3_L3_I033 A
BYW5_L2_I010 A
GVF A
India1 M
India11 M
India13 M
India15 C
India17 M
India19 A
India21 A
India23 C
India25 M
India27 M
India29 M
India31 M
India33 C
India35 M
India37 A
India39 M
India41 M
India43 M
India45 C
India47 M
India5 C
India51 C
India55 A
India57 C
India59 A
India61 M
India7 C
India9 M
L2 C
N1 C
N11 M
N13 M
N18 A
N3 C
N5 A
N7 M
N8 C
S-f1_L4_I106 C
S-f2_I107 M
S-f3_I108 M
S-f4_L4_I109 M
S-m1_I101 C
S-m2_I102 M
S-m3_I103 C
S-m4_L2_I104 C
S-m5_I105 M
S6 M
SAMN02486156 C
SAMN02486157 C
SAMN02486158 C
SAMN02486159 C
SAMN02486160 M
SAMN02486161 M
SAMN02486162 M
SAMN02486163 M
SAMN02486164 A
SAMN02486165 C
SAMN02486166 M
SAMN02486167 A
Silkia C
T2 M
T3 C
T5 C
TD1 C
TD12 M
TD15 C
TD22 A
TD27 M
TD30 C
TD6 C
TD9 C
Tibet M
Xcelris_10 C
Xcelris_101 M
Xcelris_104 A
Xcelris_105 M
Xcelris_10A M
Xcelris_10B M
Xcelris_112 C
Xcelris_113 A
Xcelris_114 A
Xcelris_11B A
Xcelris_12 C
Xcelris_120 M
Xcelris_127 A
Xcelris_128 C
Xcelris_129 C
Xcelris_12A A
Xcelris_13 C
Xcelris_137 C
Xcelris_13B C
Xcelris_14 C
Xcelris_141 A
Xcelris_143 C
Xcelris_14A C
Xcelris_14B C
Xcelris_174 A
Xcelris_175 A
Xcelris_176 A
Xcelris_1A A
Xcelris_1B A
Xcelris_219 C
Xcelris_221 C
Xcelris_222 C
Xcelris_224 C
Xcelris_226 C
Xcelris_227 C
Xcelris_275 C
Xcelris_276 C
Xcelris_280 C
Xcelris_2A M
Xcelris_2B C
Xcelris_331 C
Xcelris_332 C
Xcelris_333 C
Xcelris_335 C
Xcelris_336 C
Xcelris_339 C
Xcelris_341 C
Xcelris_378 C
Xcelris_379 C
Xcelris_380 C
Xcelris_381 A
Xcelris_382 C
Xcelris_383 C
Xcelris_384 C
Xcelris_385 M
Xcelris_392 C
Xcelris_44 C
Xcelris_4A C
Xcelris_4B C
Xcelris_5A M
Xcelris_5B C
Xcelris_67 C
Xcelris_6A C
Xcelris_6B A
Xcelris_77 C
Xcelris_8 C
Xcelris_84 C
Xcelris_8A C
Xcelris_8B C
Xcelris_90 M
Xcelris_97 M
Xcelris_98 A
Xcelris_MT-18 C
Xcelris_MT-85 A
Xcelris_MT-9 M
Y1-f1_L5_I119 A
Y1-f2_L6_I121 M
Y1-f3_L7_I101 C
Y1-m1_L6_I120 M
Y1-m2_L4_I122 C
Y1-m3_L7_I123 M
Y1-m4_I124 C
Y1-m5_L7_I102 M
YPt565 A
YPt601 A
YPt604 A
YPt609 M
YPt610 C
YPt637 C
YPt641 M
YPt648 M
You1 M
You3_L7_I1000005 M
Ypt566 A
Ypt567 A
Ypt568 M
Ypt569 C
Ypt570 A
Ypt571 A
Ypt572 M
Ypt574 C
Ypt575 A
Ypt576 A
Ypt577 M
Ypt578 C
Ypt579 A
Ypt580 C
Ypt581 M
Ypt582 M
Ypt583 M
Ypt584 C
Ypt585 A
Ypt586 A
Ypt587 M
Ypt588 M
Ypt589 C
Ypt590 M
Ypt591 A
Ypt592 M
Ypt593 M
Ypt594 C
Ypt595 A
Ypt596 M
Ypt597 M
Ypt598 A
Ypt599 M
Ypt600 A
Ypt602 M
Ypt603 M
Ypt606 C
Ypt607 M
Ypt608 C
Ypt622 A
Ypt623 M
Ypt624 A
Ypt626 C
Ypt638 C
Ypt640 M
Ypt643 C
Ypt645 M
Ypt647 C
Yt516 M
Yt517 C
Yt518 M
Yt519 C
Yt520 C
Yt521 M
Yt522 M
Yt523 A
Yt524 M
Yt525 M
Yt526 M
Yt527 A
Yt528 C
Yt529 M
Yt530 M
Yt531 A
Yt536 C
Yt538 C
Yt539 M
Yt540 M
ZJ1 M
ZJ2 C
ZJ3 C
ZJ4 M
india3 C
india49 A
production A
yp914ypt C
ypt169_L3_I011 C
ypt170_L2_I012 C
ypt171_L2_I021 C
ypt173_L2_I022 M
ypt175_L2_I023 M
ypt2041_L6_I002 M
ypt2043_L1_I037 C
ypt2051_L3_I003 C
ypt2053_L6_I004 C
ypt2063_L6_I005 C
ypt2069_L6_I006 C
ypt2071_L1_I038 C
ypt2082 A
ypt2086 A
ypt2087 M
ypt2091 M
ypt2092 M
ypt2093 A
ypt2094 C
ypt2095 M
ypt2098 M
ypt2100 M
ypt2101 M
ypt2102 M
ypt2103 C
ypt2105 C
ypt2106 M
ypt2107 M
ypt2108 A
ypt2109 M
ypt2110 M
ypt2111 M
ypt2112 M
ypt2114 A
ypt2115 M
ypt2116 C
ypt2118 A
ypt2119 M
ypt2120 M
ypt2121 M
ypt2122 M
ypt2124_L4_I052 C
ypt2126_L3_I053 C
ypt2127_L1_I036 M
ypt2128_L6_I054 M
ypt2144_L6_I055 M
ypt2145_L6_I056 A
ypt2146_L6_I001 C
ypt2163 A
ypt2164 A
ypt2165 C
ypt2166 C
ypt2167 M
ypt2168 M
ypt2169 M
ypt2170 M
ypt2171 C
ypt2172 C
ypt2173 M
ypt2174 M
ypt2175 C
ypt2176 M
ypt2177 M
ypt2178 C
ypt217_L2_I024 M
ypt2184 C
ypt2185 A
ypt2186 C
ypt2187 C
ypt2189 M
ypt2190 C
ypt2191 C
ypt219_L3_I025 M
ypt2200 C
ypt2201 C
ypt2205 C
ypt2209 M
ypt220_L2_I026 A
ypt2214 A
ypt2215 A
ypt2216 A
ypt2217 M
ypt2218 A
ypt2219 M
ypt221_L3_I042 C
ypt2220 C
ypt2221 C
ypt2222 M
ypt222_L3_I027 A
ypt2437 C
ypt2438 C
ypt2439 A
ypt2440 C
ypt2441 M
ypt2442 C
ypt2443 M
ypt2444 A
ypt2445 C
ypt2446 C
ypt2447 A
ypt2448 A
ypt2449 A
ypt2454 M
ypt2459 A
ypt2468 A
ypt2496 M
ypt2497 M
ypt2498 C
ypt2499 M
ypt2500 C
ypt2503 C
ypt2504 A
ypt2507 C
ypt2512 M
ypt2516 A
ypt2521 C
ypt2523 M
ypt2534 C
ypt2541 M
ypt2543 C
ypt2544 M
ypt2545 C
ypt2546 A
ypt2547 M
ypt2552 M
ypt2562 M
ypt2563 M
ypt2569 A
ypt2570 C
ypt2571 C
ypt2572 C
ypt2573 A
ypt2574 M
ypt2575 A
ypt2579 M
ypt258_L3_I028 C
ypt2598 A
ypt259_L2_I029 A
ypt2601 M
ypt2606 A
ypt2608 M
ypt2615 M
ypt2622 M
ypt2623 M
ypt2624 A
ypt2625 C
ypt2627 C
ypt2628 C
ypt2629 C
ypt262_L3_I030 C
ypt2630 C
ypt2636 M
ypt2638 M
ypt263_L3_I031 A
ypt2640 A
ypt2641 M
ypt2643 A
ypt2644 M
ypt2646 M
ypt264_L3_I032 C
ypt2650 M
ypt2653 M
ypt2656 C
ypt2657 C
ypt2658 A
ypt2661 A
ypt2664 A
ypt2665 C
ypt2669 C
ypt2670 C
ypt2671 M
ypt2672 M
ypt2673 C
ypt2678 M
ypt2706 C
ypt2722 M
ypt2724 M
ypt2729 M
ypt2733 C
ypt2739 M
ypt2740 A
ypt2745 A
ypt2746 M
ypt2760 A
ypt2761 C
ypt2765 A
ypt2766 M
ypt2775 M
ypt2780 C
ypt2781 M
ypt2782 M
ypt2783 M
ypt2784 A
ypt2785 C
ypt2786 M
ypt2787 M
ypt2788 C
ypt2789 A
ypt2790 A
ypt2791 M
ypt2792 M
ypt2799 A
ypt2800 C
ypt2808 M
ypt2812 M
ypt2813 C
ypt2814 C
ypt2815 C
ypt2816 C
ypt2817 C
ypt2819 M
ypt2821 C
ypt2822 C
ypt2823 C
ypt2824 C
ypt2825 C
ypt2826 C
ypt2827 C
ypt2828 M
ypt2831 C
ypt2832 M
ypt2842 C
ypt2843 M
ypt2849 M
ypt2859 C
ypt2860 A
ypt2861 A
ypt2862 A
ypt2863 A
ypt2870 A
ypt2871 A
ypt2887 A
ypt2888 A
ypt2889 A
ypt2890_L3_I040 A
ypt2891_L3_I041 A
ypt2892 M
ypt2893_L3_I025 M
ypt2894 M
ypt2895_L3_I026 C
ypt2902 M
ypt2909 A
ypt2910 A
ypt2911 C
ypt2912 M
ypt2918 M
ypt2929 M
ypt2930 M
ypt3001 C
ypt3002 M
ypt3003 A
ypt3004 M
ypt3005 M
ypt3006 M
ypt3007 C
ypt3008 M
ypt3009 C
ypt3010 C
ypt3011 A
ypt3012 C
ypt3016 A
ypt3017 M
ypt3028 C
ypt3038 M
ypt3040 C
ypt3041 C
ypt3042 M
ypt3043 M
ypt3044 A
ypt3045 C
ypt3046 A
ypt3047 M
ypt3050 C
ypt3051 C
ypt3052 M
ypt3061 M
ypt3069 M
ypt3072 C
ypt3133 M
ypt3134 C
ypt3135 C
ypt3136 M
ypt3137 M
ypt3138 C
ypt3139 C
ypt3140 C
ypt3141 C
ypt3142 M
ypt3143 M
ypt3144_L3_I039 M
ypt3145 M
ypt3146 A
ypt3149_L2_I034 C
ypt3150_L8_I023 M
ypt3159_L6_I035 A
ypt3160_L8_I024 C
ypt3162_L6_I036 M
ypt3179_L8_I025 C
ypt3180 C
ypt3181_L7_I038 C
ypt3182_L1_I039 M
ypt3189_L1_I040 C
ypt3190_L8_I026 A
ypt3191_L2_I041 M
ypt3193_L1_I027 C
ypt3195_L1_I042 C
ypt3196_L2_I043 C
ypt3197_L1_I044 M
ypt3198_L2_I045 C
ypt3204_L7_I046 M
ypt3205_L2_I047 A
ypt3206_L1_I048 M
ypt3207_L6_I050 M
ypt3210_L6_I051 M
ypt3211_L6_I052 C
ypt3212_L4_I028 A
ypt3213_L8_I029 A
ypt3219_L1_I030 A
ypt3220_L1_I031 C
ypt3221_L1_I032 M
ypt3222_L1_I033 A
ypt3224_L8_I043 C
ypt3225_L2_I053 C
ypt3226_L3_I044 A
ypt3228-7_L1_I034 C
ypt3229_L8_I045 C
ypt3238_L3_I046 C
ypt3239_L1_I035 C
ypt3240_L6_I054 A
ypt3243_L8_I047 C
ypt3246_L6_I050 C
ypt3247_L6_I051 C
ypt3257_L1_I056 A
ypt3258_L3_I001 A
ypt3259_L6_I002 A
ypt3260_L6_I003 A
ypt3261_L7_I004 A
ypt3262_L7_I005 C
ypt3269_L7_I006 C
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 C
ypt3274A_L7_I011 C
ypt3275_L1_I012 C
ypt3276_L7_I021 C
ypt3289_L8_I021 C
ypt47_L2_I029 M
ypt50_L2_I030 C
ypt53_L2_I032 C
ypt55_L1_I033 C
ypt890 C
ypt891 C
ypt896_L2_I047 C
ypt897_L3_I048 C
ypt899_L6_I051 C
ypt902_L1_I053 C
ypt903_L2_I054 C
ypt904_L4_I055 C
ypt905_L6_I056 A
ypt906_L3_I001 C
ypt907_L6_I002 C
ypt908_L1_I003 C
ypt909_L5_I004 M
ypt910_L3_I005 C
ypt912 C
ypt913 C
ypt915 C
ypt917 M
ypt918_L3_I007 C
ypt919_L4_I008 C
ypt920_L5_I010 C
ypt921_L8_I011 A
ypt923_L2_I051 C
ypt924_L3_I021 C
ypt925_L2_I022 C
ypt926_L2_I023 C
ypt928 C
ypt929 M
ypt930 M
ypt931 A
ypt933 C
ypt938x A
ypt939_L5_I025 M
ypt941_L5_I027 A
ypt942_L7_I028 M
ypt943 C
ypt944_L3_I030 M
ypt945_L4_I031 C
ypt946_L4_I032 M
ypt947_L5_I033 C
ypt948_L2_I034 M
ypt949_L3_I035 A
ypt950_L5_I036 A
ypt951 A
ypt952 M
ypt953 C
ypt954 C
ypt955 M
ypt956x M
ypt957 M
ypt958 M
ypt959 A
ypt960 A
ypt961 M
ypt962 C
ypt963 A
ypt964 A
ypt965 M
ypt971 C
ypt972x A
ypt973_L4_I037 A
ypt974 M
ypt975_L8_I039 C
ypt976_L7_I040 A
ypt977_L2_I041 C
ypt978_L2_I052 M
ypt979_L6_I042 M
ypt980_L3_I043 M
ypt981_L2_I044 C
ypt982_L4_I045 A
ypt984 A
yptwj M
147209 M
147830 C
GLF_denovo M
Gallus_Sonneriatii_d A
Ypt4000 M
Ypt4879 M
Ypt4880 C