ggaS0004002428921

Detail information of ggaS0004002428921

1.General Information

SNP ID:	ggaS0004002428921
Organism:	Gallus gallus
Individual:	103S

2.Allele information

Platform:	SOLEXA
Method:	sequence
SNP Class:	SNP
Genotype:	T

3.Reference Map information

Chrom	Position	Reference	103S
chr27	4920	C	T

4.Gene information

Var ID	Gene ID	Transcript ID	Gene Symbol	Variant Effect	Biotype	cDNA Position	Allele Change	Protein ID	Protein Position	Residue Change
ggaS0004002428921	ENSGALG00000000149		-	downstream_gene_variant			=>			=>

5.Individual Genotype

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Individual	Genotype
100S	T
101S_L1_I028	T
102S_L3_I037	T
104S_L7_I029	Y
105S_L3_I039	C
106S_L6_I030	T
107S_L2_I031	Y
108S_L6_I032	T
109S_L5_I033	Y
10S_L1_I052	Y
110S_L4_I034	T
111S_L3_I047	Y
112S_L3_I035	Y
113S_L1_I036	T
114S_L3_I037	Y
116S_L6_I038	T
117S_L2_I039	T
118S_L4_I040	C
119S_L3_I041	C
11S	T
120S_L1_I041	Y
121S_L3_I042	Y
122S_L4_I043	Y
123S_L4_I044	C
124S_L2_I048	T
125S_L3_I050	T
126S_L3_I051	T
127S_L2_I045	Y
128S_L1_I042	T
129S_L3_I043	Y
12S_L4_I011	Y
130S_L4_I044	T
131S_L2_I045	Y
132S_L2_I046	C
133S_L8_I046	C
134S_L2_I047	C
135S_L3_I048	Y
13S_L7_I012	C
14S_L2_I021	C
15S_L6_I022	Y
16S_L5_I023	T
17S_L3_I024	C
18833	C
18S_L7_I025	T
19297	T
19912	Y
19S_L4_I026	C
1S	C
20736	T
20S_L7_I027	Y
21S_L6_I028	Y
22S_L6_I029	C
23S_L2_I030	Y
24S_L4_I031	Y
25S_L3_I032	C
26S	C
27S_L4_I034	Y
28S_L4_I035	Y
29S_L3_I036	T
2S	C
30S_L2_I037	Y
31S_L3_I038	T
32S_L1_I039	T
33S	T
35S_L5_I041	T
36S_L5_I042	Y
37S_L2_I043	Y
38S_L6_I044	Y
39S_L6_I053	Y
3S_L4_I003	C
40S_L2_I054	C
41S_L5_I045	Y
42S_L3_I055	Y
43S	T
44S_L4_I001	T
45S_L2_I002	Y
46S_L4_I003	T
47S_L3_I046	Y
48S_L1_I004	Y
49S_L1_I005	Y
4S_L4_I004	C
50S_L1_I047	T
51S_L6_I048	T
52S_L2_I050	T
53S_L2_I006	Y
54S_L2_I007	T
55S_L1_I008	Y
56S_L1_I010	T
57S_L3_I046	T
58S_L4_I051	T
59S_L5_I052	Y
5S	Y
60S_L5_I053	C
61S_L8_I054	Y
62S_L8_I055	Y
63S_L5_I056	Y
64S_L4_I001	T
65S_L5_I002	T
66S_L2_I003	Y
67S_L1_I011	T
68S_L3_I012	Y
69S	Y
6S	T
70S	T
71S_L3_I023	Y
72S_L1_I024	T
73S_L1_I025	T
74S_L4_I026	Y
75S_L3_I027	Y
76S_L1_I028	Y
77S_L4_I029	C
78S_L4_I030	T
79S_L2_I031	C
7S_L4_I007	T
80S_L3_I004	Y
81S_L1_I005	Y
82S	T
83S_L3_I033	Y
84S_L5_I006	T
85S_L5_I007	T
86S_L5_I008	Y
87S_L5_I010	Y
88S_L4_I011	T
89S_L6_I012	T
90S_L4_I021	Y
91S_L4_I022	T
92S_L5_I023	T
93S_L7_I024	T
95S_L8_I025	T
96S_L4_I026	C
97S_L8_I027	T
98S_L3_I034	Y
99S_L2_I035	Y
9S	C
A1	T
A10	T
A12	T
A14	T
A3	T
A8	T
BKL2	T
BLB1_L2_I007	T
BLB2_L2_I008	T
BLO1	T
BLO11	T
BLO15	T
BLO2	T
BLO3_L4_I022	T
BOJA2	T
BYW3_L3_I033	T
BYW5_L2_I010	T
GVF	T
India1	T
India11	T
India13	Y
India15	T
India17	Y
India19	T
India21	T
India23	C
India25	Y
India27	T
India29	Y
India31	Y
India33	T
India35	Y
India37	T
India39	T
India41	Y
India43	T
India45	Y
India47	T
India5	T
India51	T
India55	C
India57	T
India59	Y
India61	Y
India7	T
India9	T
L2	T
N1	T
N11	T
N13	T
N18	Y
N3	T
N5	T
N7	T
N8	T
S-f1_L4_I106	C
S-f2_I107	T
S-f3_I108	T
S-f4_L4_I109	T
S-m1_I101	T
S-m2_I102	T
S-m3_I103	T
S-m4_L2_I104	T
S-m5_I105	T
S6	Y
SAMN02486156	T
SAMN02486157	Y
SAMN02486158	T
SAMN02486159	T
SAMN02486160	Y
SAMN02486161	Y
SAMN02486162	T
SAMN02486163	T
SAMN02486164	T
SAMN02486165	T
SAMN02486166	Y
SAMN02486167	T
Silkia	T
T3	Y
T5	Y
TD1	C
TD12	T
TD15	T
TD22	T
TD27	T
TD30	Y
TD6	T
TD9	T
Tibet	T
Xcelris_10	T
Xcelris_101	T
Xcelris_104	T
Xcelris_10A	T
Xcelris_10B	C
Xcelris_112	T
Xcelris_113	T
Xcelris_114	T
Xcelris_11B	T
Xcelris_12	T
Xcelris_120	T
Xcelris_127	C
Xcelris_128	T
Xcelris_129	T
Xcelris_12A	T
Xcelris_13	T
Xcelris_137	C
Xcelris_13B	C
Xcelris_14	T
Xcelris_142	T
Xcelris_143	T
Xcelris_144	T
Xcelris_14A	T
Xcelris_14B	T
Xcelris_174	Y
Xcelris_175	Y
Xcelris_1A	T
Xcelris_1B	T
Xcelris_219	T
Xcelris_221	T
Xcelris_222	T
Xcelris_224	T
Xcelris_226	T
Xcelris_227	T
Xcelris_276	T
Xcelris_278	T
Xcelris_279	C
Xcelris_282	T
Xcelris_2A	Y
Xcelris_2B	T
Xcelris_3	T
Xcelris_331	T
Xcelris_332	C
Xcelris_333	C
Xcelris_335	Y
Xcelris_339	C
Xcelris_340	T
Xcelris_341	C
Xcelris_36	T
Xcelris_378	T
Xcelris_379	Y
Xcelris_381	C
Xcelris_382	C
Xcelris_383	T
Xcelris_384	Y
Xcelris_385	Y
Xcelris_392	T
Xcelris_4A	C
Xcelris_4B	C
Xcelris_5	T
Xcelris_5A	T
Xcelris_67	T
Xcelris_6A	Y
Xcelris_6B	C
Xcelris_7	T
Xcelris_77	C
Xcelris_8	T
Xcelris_84	T
Xcelris_8B	Y
Xcelris_90	C
Xcelris_97	Y
Xcelris_98	T
Xcelris_MT-18	Y
Xcelris_MT-38	T
Xcelris_MT-46	C
Xcelris_MT-48	T
Xcelris_MT-85	T
Xcelris_MT-9	T
Y1-f1_L5_I119	T
Y1-f2_L6_I121	T
Y1-f3_L7_I101	T
Y1-m1_L6_I120	T
Y1-m2_L4_I122	T
Y1-m3_L7_I123	T
Y1-m4_I124	T
Y1-m5_L7_I102	T
YPt565	T
YPt601	T
YPt604	T
YPt609	T
YPt610	T
YPt637	T
YPt641	Y
YPt648	Y
You1	T
You3_L7_I1000005	T
Ypt566	Y
Ypt567	C
Ypt568	T
Ypt569	T
Ypt570	C
Ypt571	C
Ypt572	T
Ypt573	T
Ypt574	T
Ypt575	T
Ypt576	T
Ypt577	T
Ypt578	T
Ypt579	T
Ypt580	T
Ypt581	T
Ypt582	T
Ypt584	Y
Ypt585	C
Ypt586	T
Ypt587	T
Ypt588	T
Ypt589	T
Ypt590	T
Ypt591	T
Ypt592	T
Ypt593	T
Ypt594	T
Ypt595	T
Ypt596	T
Ypt597	T
Ypt598	T
Ypt599	T
Ypt600	T
Ypt602	T
Ypt603	Y
Ypt606	Y
Ypt607	T
Ypt608	T
Ypt622	T
Ypt623	T
Ypt624	T
Ypt626	T
Ypt638	T
Ypt640	Y
Ypt643	T
Ypt645	T
Ypt646	T
Yt516	T
Yt517	T
Yt518	Y
Yt519	C
Yt520	T
Yt521	C
Yt522	T
Yt523	Y
Yt524	Y
Yt525	T
Yt526	T
Yt527	T
Yt528	T
Yt529	T
Yt530	T
Yt531	Y
Yt536	Y
Yt538	T
Yt539	Y
Yt540	T
ZJ1	T
ZJ2	Y
ZJ3	T
ZJ4	T
india3	T
india49	Y
production	C
ypt169_L3_I011	T
ypt170_L2_I012	Y
ypt171_L2_I021	Y
ypt173_L2_I022	T
ypt175_L2_I023	T
ypt2041_L6_I002	Y
ypt2043_L1_I037	T
ypt2051_L3_I003	T
ypt2053_L6_I004	Y
ypt2063_L6_I005	T
ypt2069_L6_I006	T
ypt2071_L1_I038	T
ypt2082	Y
ypt2086	C
ypt2087	Y
ypt2091	Y
ypt2092	T
ypt2093	Y
ypt2094	T
ypt2095	C
ypt2098	Y
ypt2100	T
ypt2101	T
ypt2102	Y
ypt2103	Y
ypt2105	Y
ypt2106	T
ypt2107	C
ypt2108	T
ypt2109	Y
ypt2110	C
ypt2111	T
ypt2112	T
ypt2114	T
ypt2115	Y
ypt2116	Y
ypt2117	Y
ypt2118	Y
ypt2119	Y
ypt2120	T
ypt2121	Y
ypt2122	Y
ypt2124_L4_I052	T
ypt2126_L3_I053	C
ypt2127_L1_I036	Y
ypt2128_L6_I054	Y
ypt2144_L6_I055	Y
ypt2145_L6_I056	Y
ypt2146_L6_I001	Y
ypt2164	Y
ypt2165	Y
ypt2166	C
ypt2167	Y
ypt2168	C
ypt2169	Y
ypt2170	T
ypt2171	C
ypt2172	Y
ypt2173	Y
ypt2174	T
ypt2175	T
ypt2176	T
ypt2177	T
ypt2178	T
ypt217_L2_I024	Y
ypt2184	T
ypt2185	T
ypt2186	C
ypt2187	Y
ypt2189	Y
ypt2190	T
ypt2191	T
ypt219_L3_I025	Y
ypt2200	T
ypt2205	T
ypt2209	C
ypt220_L2_I026	T
ypt2214	T
ypt2215	T
ypt2216	Y
ypt2217	Y
ypt2218	T
ypt2219	C
ypt221_L3_I042	T
ypt2220	T
ypt2221	T
ypt2222	Y
ypt222_L3_I027	Y
ypt2437	C
ypt2438	T
ypt2439	Y
ypt2440	T
ypt2441	Y
ypt2442	Y
ypt2443	T
ypt2444	Y
ypt2445	Y
ypt2446	T
ypt2447	Y
ypt2448	T
ypt2449	T
ypt2454	C
ypt2459	C
ypt2468	T
ypt2496	Y
ypt2497	Y
ypt2498	Y
ypt2499	C
ypt2500	T
ypt2503	T
ypt2504	T
ypt2507	Y
ypt2512	T
ypt2516	Y
ypt2521	Y
ypt2523	T
ypt2534	Y
ypt2541	C
ypt2543	C
ypt2544	C
ypt2545	Y
ypt2546	C
ypt2547	C
ypt2552	Y
ypt2562	T
ypt2563	C
ypt2569	C
ypt2570	T
ypt2571	T
ypt2572	Y
ypt2573	C
ypt2574	C
ypt2575	T
ypt2579	Y
ypt258_L3_I028	Y
ypt2598	C
ypt259_L2_I029	Y
ypt2601	Y
ypt2606	C
ypt2608	C
ypt2615	Y
ypt2622	Y
ypt2623	T
ypt2624	C
ypt2625	Y
ypt2627	T
ypt2628	T
ypt2629	T
ypt262_L3_I030	T
ypt2630	Y
ypt2636	Y
ypt2638	Y
ypt263_L3_I031	Y
ypt2640	C
ypt2641	C
ypt2643	Y
ypt2644	Y
ypt2646	T
ypt264_L3_I032	T
ypt2650	Y
ypt2653	T
ypt2656	Y
ypt2657	Y
ypt2658	Y
ypt2661	C
ypt2664	T
ypt2665	T
ypt2669	T
ypt2670	Y
ypt2671	T
ypt2672	Y
ypt2673	T
ypt2678	T
ypt2706	T
ypt2722	Y
ypt2724	Y
ypt2729	C
ypt2733	Y
ypt2739	Y
ypt2740	Y
ypt2745	T
ypt2746	T
ypt2760	Y
ypt2761	T
ypt2765	Y
ypt2766	Y
ypt2775	T
ypt2780	T
ypt2781	Y
ypt2782	T
ypt2783	T
ypt2784	Y
ypt2785	Y
ypt2786	Y
ypt2787	C
ypt2788	T
ypt2789	C
ypt2790	T
ypt2791	Y
ypt2792	Y
ypt2799	T
ypt2800	Y
ypt2808	T
ypt2810	T
ypt2812	Y
ypt2813	Y
ypt2814	T
ypt2815	T
ypt2816	Y
ypt2817	T
ypt2819	T
ypt2821	T
ypt2822	T
ypt2823	C
ypt2824	T
ypt2825	Y
ypt2826	Y
ypt2827	C
ypt2828	T
ypt2831	T
ypt2832	T
ypt2842	T
ypt2843	T
ypt2849	T
ypt2859	T
ypt2860	T
ypt2861	T
ypt2862	T
ypt2863	T
ypt2870	T
ypt2871	T
ypt2887	T
ypt2888	T
ypt2889	T
ypt2890_L3_I040	T
ypt2891_L3_I041	T
ypt2892	T
ypt2893_L3_I025	T
ypt2894	Y
ypt2895_L3_I026	T
ypt2902	Y
ypt2909	T
ypt2910	T
ypt2911	C
ypt2912	Y
ypt2918	T
ypt2929	Y
ypt2930	Y
ypt3001	T
ypt3002	Y
ypt3003	T
ypt3004	T
ypt3005	Y
ypt3006	T
ypt3007	Y
ypt3008	T
ypt3009	T
ypt3010	T
ypt3011	C
ypt3012	T
ypt3016	Y
ypt3017	Y
ypt3028	T
ypt3038	T
ypt3040	T
ypt3041	T
ypt3042	T
ypt3043	T
ypt3044	Y
ypt3045	T
ypt3046	T
ypt3047	T
ypt3050	T
ypt3051	C
ypt3052	T
ypt3061	T
ypt3069	T
ypt3072	T
ypt3133	T
ypt3134	T
ypt3135	T
ypt3136	T
ypt3137	Y
ypt3138	T
ypt3139	Y
ypt3140	T
ypt3141	T
ypt3142	Y
ypt3143	Y
ypt3144_L3_I039	T
ypt3145	T
ypt3146	T
ypt3149_L2_I034	T
ypt3150_L8_I023	Y
ypt3159_L6_I035	T
ypt3160_L8_I024	T
ypt3179_L8_I025	Y
ypt3180	Y
ypt3181_L7_I038	C
ypt3182_L1_I039	T
ypt3189_L1_I040	T
ypt3190_L8_I026	T
ypt3191_L2_I041	T
ypt3193_L1_I027	Y
ypt3195_L1_I042	T
ypt3196_L2_I043	T
ypt3197_L1_I044	T
ypt3198_L2_I045	T
ypt3204_L7_I046	T
ypt3205_L2_I047	T
ypt3207_L6_I050	T
ypt3210_L6_I051	C
ypt3211_L6_I052	T
ypt3212_L4_I028	T
ypt3213_L8_I029	T
ypt3219_L1_I030	T
ypt3220_L1_I031	T
ypt3221_L1_I032	T
ypt3222_L1_I033	C
ypt3224_L8_I043	T
ypt3225_L2_I053	T
ypt3226_L3_I044	T
ypt3228-7_L1_I034	T
ypt3229_L8_I045	C
ypt3238_L3_I046	C
ypt3239_L1_I035	T
ypt3241_L6_I055	T
ypt3243_L8_I047	T
ypt3245	T
ypt3246_L6_I050	T
ypt3247_L6_I051	T
ypt3257_L1_I056	Y
ypt3258_L3_I001	Y
ypt3260_L6_I003	T
ypt3261_L7_I004	T
ypt3262_L7_I005	T
ypt3269_L7_I006	T
ypt3270_L1_I007	T
ypt3271_L7_I008	T
ypt3272_L7_I010	T
ypt3274A_L7_I011	T
ypt3276_L7_I021	T
ypt3277_L6_I027	T
ypt3278_L3_I028	C
ypt4001	T
ypt47_L2_I029	Y
ypt50_L2_I030	T
ypt51_L2_I031	T
ypt53_L2_I032	T
ypt55_L1_I033	C
ypt890	C
ypt891	Y
ypt897_L3_I048	C
ypt898	T
ypt899_L6_I051	C
ypt900_L2_I050	T
ypt902_L1_I053	T
ypt903_L2_I054	Y
ypt905_L6_I056	C
ypt906_L3_I001	C
ypt907_L6_I002	T
ypt908_L1_I003	Y
ypt909_L5_I004	Y
ypt910_L3_I005	T
ypt913	C
ypt915	C
ypt916	T
ypt917	T
ypt919_L4_I008	T
ypt920_L5_I010	Y
ypt921_L8_I011	C
ypt922_L4_I012	T
ypt923_L2_I051	C
ypt924_L3_I021	T
ypt925_L2_I022	T
ypt928	Y
ypt929	C
ypt930	Y
ypt931	T
ypt933	Y
ypt934x	T
ypt935	C
ypt936	T
ypt938x	T
ypt939_L5_I025	T
ypt941_L5_I027	T
ypt942_L7_I028	T
ypt943	T
ypt944_L3_I030	T
ypt945_L4_I031	T
ypt946_L4_I032	T
ypt947_L5_I033	T
ypt948_L2_I034	T
ypt949_L3_I035	T
ypt950_L5_I036	T
ypt951	T
ypt952	T
ypt953	T
ypt954	T
ypt955	Y
ypt956x	Y
ypt957	T
ypt958	T
ypt959	Y
ypt960	C
ypt961	T
ypt962	T
ypt963	C
ypt964	C
ypt965	T
ypt966	T
ypt971	T
ypt972x	T
ypt973_L4_I037	T
ypt974	T
ypt975_L8_I039	T
ypt976_L7_I040	T
ypt977_L2_I041	T
ypt978_L2_I052	T
ypt979_L6_I042	T
ypt981_L2_I044	Y
ypt982_L4_I045	C
ypt984	T
yptwj	T
147209	T
147830	T
GLF_denovo	T
Gallus_Sonneriatii_d	T
Ypt4000	T
Ypt4879	T
Ypt4880	T